RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 SPDYE7PQ495Y7 208 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 Q5PR19 223 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 C20orf204Q6ZNR8 217 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 BIVMQ86UB2 503 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 ZNF527Q8NB42 609 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 OR5D16Q8NGK9 328 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 FBXO27Q8NI29 283 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 ABHD3Q8WU67 409 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 OSTF1Q92882 214 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 PIGTQ969N2 578 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 MOAP1Q96BY2 351 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 ZNF524Q96C55 264 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 TUBGCP3Q96CW5 907 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 OR7D2Q96RA2 312 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 PRPF18Q99633 342 aaKnown RBP11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 CCL19Q99731 98 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 HOXD1Q9GZZ0 328 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 COQ10BQ9H8M1 238 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 ASIC5Q9NY37 505 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 CARD8Q9Y2G2 431 aa11.61□□□□□ -0.55
HMGCS1-205ENST00000508319 USF3Q68DE3 2245 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 CSPG4Q6UVK1 2322 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 ITM2AO43736 263 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 SMPD2O60906 423 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 SOX30O94993 753 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 NTN1O95631 604 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 NUDT14O95848 222 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 TUBBP07437 444 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 INHBBP09529 407 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 PPP3CBP16298 524 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 PRKCAP17252 672 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 SOAT1P35610 550 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 ATP12AP54707 1039 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 CARD18P57730 90 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 ZNF844Q08AG5 666 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 BEX5Q5H9J7 111 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 PDSS1Q5T2R2 415 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 TFAP2EQ6VUC0 442 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 BEND4Q6ZU67 534 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 CLECL1Q8IZS7 167 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 ZNF614Q8N883 585 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 PPP1R14CQ8TAE6 165 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 GPR119Q8TDV5 335 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 IGFBPL1Q8WX77 278 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 ROBO4Q8WZ75 1007 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 CPNE4Q96A23 557 aaPredicted RBP11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 TMEM109Q9BVC6 243 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 C12orf49Q9H741 205 aa11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 ZNF395Q9H8N7 513 aaPredicted RBP11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 NOP53Q9NZM5 478 aaKnown RBP11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 GPC6Q9Y625 555 aaPredicted RBP11.6□□□□□ -0.55
HMGCS1-205ENST00000508319 JMJD1CQ15652 2540 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 CENPVL1A0A0U1RR11 272 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 ESPNB1AK53 854 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 H3BNH8 94 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 ETV2O00321 342 aaPredicted RBP11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 ZNF195O14628 629 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 CFLARO15519 480 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 ARHGEF9O43307 516 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 GCM2O75603 506 aaPredicted RBP11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 PSMB1P20618 241 aaKnown RBP11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 CLDN8P56748 225 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 EMX2Q04743 252 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 MAD2L1Q13257 205 aaPredicted RBP11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 PDCD2Q16342 344 aaPredicted RBP11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 SMU1Q2TAY7 513 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 PDZK1Q5T2W1 519 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 OR4F3Q6IEY1 312 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 WDR93Q6P2C0 686 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 NUDCD3Q8IVD9 361 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 P3H2Q8IVL5 708 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 GABRG1Q8N1C3 465 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 CLEC4FQ8N1N0 589 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 MREGQ8N565 214 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 ZNF781Q8N8C0 355 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 OR5W2Q8NH69 310 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 ZFP90Q8TF47 636 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 ARSGQ96EG1 525 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 COX4I2Q96KJ9 171 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 MRGPRX4Q96LA9 322 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 ZIM3Q96PE6 472 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 ACTR6Q9GZN1 396 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 NMUR2Q9GZQ4 415 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 OR10A4Q9H209 315 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 KLHL13Q9P2N7 655 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 KCNE5Q9UJ90 142 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 DTNAQ9Y4J8 743 aa11.59□□□□□ -0.55
HMGCS1-205ENST00000508319 CADP27708 2225 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 RNF103-CHMP3A0A140T963 221 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 GJE1A6NN92 205 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 RNASET2O00584 256 aaKnown RBP11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 ZNF264O43296 627 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 SERPINE1P05121 402 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 PABPC4LP0CB38 370 aaKnown RBP11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 UBL4AP11441 157 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 ADSLP30566 484 aaPredicted RBP11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 NR1H2P55055 460 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 LTBQ06643 244 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 SELENBP1Q13228 472 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 SKP2Q13309 424 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms