RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 ABCC13Q9NSE7 274 aa3.26□□□□□ -1.89
TRAPPC13-209ENST00000508304 SPATA7Q9P0W8 599 aa3.26□□□□□ -1.89
TRAPPC13-209ENST00000508304 RCOR3Q9P2K3 495 aaPredicted RBP3.26□□□□□ -1.89
TRAPPC13-209ENST00000508304 THAP10Q9P2Z0 257 aaPredicted RBP3.26□□□□□ -1.89
TRAPPC13-209ENST00000508304 GALPQ9UBC7 116 aa3.26□□□□□ -1.89
TRAPPC13-209ENST00000508304 CYTH4Q9UIA0 394 aa3.26□□□□□ -1.89
TRAPPC13-209ENST00000508304 BARX2Q9UMQ3 279 aaPredicted RBP3.26□□□□□ -1.89
TRAPPC13-209ENST00000508304 IFT52Q9Y366 437 aa3.26□□□□□ -1.89
TRAPPC13-209ENST00000508304 TTC21BQ7Z4L5 1316 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 MYH15Q9Y2K3 1946 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 TRBV5-4A0A0C4DH59 114 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 A0A0U1RQS6 177 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 ESYT2A0FGR8 921 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 HEATR9A2RTY3 570 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 ZNF716A6NP11 495 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 BTN3A3O00478 584 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 LSM1O15116 133 aaKnown RBP3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 TIMM8AO60220 97 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 ECI2O75521 394 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 NXPH4O95158 308 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 OPN1LWP04000 364 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 IGF1P05019 195 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 SNRPCP09234 159 aaKnown RBP3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 ALPIP09923 528 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 ZNF735P0CB33 412 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 SDC1P18827 310 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 TNNI1P19237 187 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 PGCP20142 388 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 GALP22466 123 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 RPL13AP40429 203 aaKnown RBP3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 ETV5P41161 510 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 BDKRB1P46663 353 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 CCT3P49368 545 aaKnown RBP3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 ARHGDIAP52565 204 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 BST1Q10588 318 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 ZNF146Q15072 292 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 ZIC1Q15915 447 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 EIPR1Q53HC9 387 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 DCST2Q5T1A1 773 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 PRAMEF20Q5VT98 475 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 METAP1DQ6UB28 335 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 ADAMTSL5Q6ZMM2 481 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 KDM7AQ6ZMT4 941 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 IFNEQ86WN2 208 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 CLEC4FQ8N1N0 589 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 CEP112Q8N8E3 955 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 SUMF1Q8NBK3 374 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 OR10A7Q8NGE5 316 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 OR4D5Q8NGN0 318 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 AGR3Q8TD06 166 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 COQ2Q96H96 371 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 TSNARE1Q96NA8 513 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 SLC6A7Q99884 636 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 SPATA16Q9BXB7 569 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 DUSP16Q9BY84 665 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 ROPN1BQ9BZX4 212 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 MCCC2Q9HCC0 563 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 NANSQ9NR45 359 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 SLC2A8Q9NY64 477 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 NPTNQ9Y639 398 aa3.25□□□□□ -1.89
TRAPPC13-209ENST00000508304 IGHV3-20A0A0C4DH32 117 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 IGHV3-38A0A0C4DH36 116 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 OR52A4PA6NMU1 304 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 ARHGEF33A8MVX0 844 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 G3V2L1 256 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 FCN1O00602 326 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 OR7A17O14581 309 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 PHOX2AO14813 284 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 MSH4O15457 936 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 B3GAT3O94766 335 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 NDUFB10O96000 172 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 JCHAINP01591 159 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 MELTFP08582 738 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 H2BFMP0C1H6 154 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 RNH1P13489 461 aaKnown RBP3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 POU2F1P14859 743 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 NCK1P16333 377 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 XRCC1P18887 633 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 RPL4P36578 427 aaKnown RBP3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 NDUFV3P56181 108 aaKnown RBP3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 SEC61GP60059 68 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 CRMP1Q14194 572 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 ELAVL3Q14576 367 aaKnown RBP3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 DPYSL2Q16555 572 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 PDZK1Q5T2W1 519 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 FAM219BQ5XKK7 198 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 CARD17Q5XLA6 110 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 WDR25Q64LD2 544 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 OR4F3Q6IEY1 312 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 Q6ZVH6 145 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 SLC35F2Q8IXU6 374 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 BPIFB2Q8N4F0 458 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 DHRSXQ8N5I4 330 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 ATP6V0D2Q8N8Y2 350 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 OR1F12Q8NHA8 337 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 M1APQ8TC57 530 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 SLC22A8Q8TCC7 542 aa3.24□□□□□ -1.89
TRAPPC13-209ENST00000508304 SCFD1Q8WVM8 642 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms