RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 OR52B2Q96RD2 323 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 OR52E6Q96RD3 313 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 PANX1Q96RD7 426 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 SLC35A5Q9BS91 424 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 YIPF4Q9BSR8 244 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 NMUR2Q9GZQ4 415 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 PRDM14Q9GZV8 571 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 RAD21L1Q9H4I0 556 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 CCDC134Q9H6E4 229 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 GALNT9Q9HCQ5 603 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 ZNF446Q9NWS9 450 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 GALNT8Q9NY28 637 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 DKKL1Q9UK85 242 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 PRDM4Q9UKN5 801 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 LIPT1Q9Y234 373 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 TESMINQ9Y4I5 508 aa8.31□□□□□ -1.08
UBE2D3-223ENST00000508249 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.3□□□□□ -1.081e-7■■■■□ 20.5
UBE2D3-223ENST00000508249 TGP01266 2768 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 GXYLT2A0PJZ3 443 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 SH3D21A4FU49 640 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 MBD3L3A6NE82 208 aaPredicted RBP8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 NDUFB5O43674 189 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 SCO2O43819 266 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 STX11O75558 287 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 OXSR1O95747 527 aaPredicted RBP8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 ANGPTL1O95841 491 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 PAX1P15863 534 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 ZNF17P17021 662 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 BMP7P18075 431 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 EFNA1P20827 205 aaPredicted RBP8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 DPP4P27487 766 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 CCKARP32238 428 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 OPRM1P35372 400 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 RFX3P48380 749 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 PTH2RP49190 550 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 IDH3AP50213 366 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 POLR2JP52435 117 aaKnown RBP8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 ATP12AP54707 1039 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 EEFSECP57772 596 aaKnown RBP8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 PHC1P78364 1004 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 RCAN2Q14206 197 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 TOMM20Q15388 145 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 BCL2A1Q16548 175 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 GRAMD1BQ3KR37 738 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 DCST1Q5T197 706 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 METTL21CQ5VZV1 264 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 AP1ARQ63HQ0 302 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 VASNQ6EMK4 673 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 HEPHL1Q6MZM0 1159 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 C16orf62Q7Z3J2 963 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 LACC1Q8IV20 430 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 MAPK1IP1LQ8NDC0 245 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 FAM83FQ8NEG4 500 aaPredicted RBP8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 TOR1AIP2Q8NFQ8 470 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 OR14L1PQ8NHC6 308 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 MBD3L2Q8NHZ7 208 aaPredicted RBP8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 TSPEARQ8WU66 669 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 TMEM158Q8WZ71 300 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 CDS1Q92903 461 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 ABTB1Q969K4 478 aaPredicted RBP8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 C16orf58Q96GQ5 468 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 SFXN2Q96NB2 322 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 HS3ST6Q96QI5 342 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 SERHLQ9NQF3 203 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 ALKBH4Q9NXW9 302 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 TAS2R10Q9NYW0 307 aa8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 C6orf203Q9P0P8 240 aaPredicted RBP8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 NUP214P35658 2090 aaPredicted RBP8.3□□□□□ -1.08
UBE2D3-223ENST00000508249 TRRAPQ9Y4A5 3859 aa8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 C7orf72A4D263 438 aa8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 TMEM247A6NEH6 219 aa8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 CCDC154A6NI56 674 aa8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 EEF1E1-BLOC1S5C9J1V9 151 aa8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 EEF1E1O43324 174 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 EIF4E2O60573 245 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 NME6O75414 186 aaPredicted RBP8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 ANP32DO95626 131 aa8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 IGKV1D-16P01601 117 aa8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 PEPDP12955 493 aa8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 CPN1P15169 458 aa8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 PPIBP23284 216 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 IL12AP29459 219 aa8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 EIF1P41567 113 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 NME5P56597 212 aa8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 EEF1A1P68104 462 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 DMTNQ08495 405 aa8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 FOXF2Q12947 444 aa8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 GNA13Q14344 377 aa8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 ZSWIM7Q19AV6 140 aa8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 ARHGAP11BQ3KRB8 267 aa8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 EEF1A1P5Q5VTE0 462 aa8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 NSUN5P2Q63ZY6 315 aa8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 PODNL1Q6PEZ8 512 aa8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 FIGNL1Q6PIW4 674 aa8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 ZNF621Q6ZSS3 439 aa8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 ANKRD46Q86W74 232 aa8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 KIF18BQ86Y91 864 aa8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 HIPK1Q86Z02 1210 aa8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 C9orf106Q8NAJ2 232 aa8.29□□□□□ -1.08
UBE2D3-223ENST00000508249 OR2M3Q8NG83 312 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms