RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 SLC38A9Q8NBW4 561 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 LHFPL5Q8TAF8 219 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 LGALS14Q8TCE9 139 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 RASSF5Q8WWW0 418 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 CDS1Q92903 461 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 SLC38A2Q96QD8 506 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 PCBD2Q9H0N5 130 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 FLRT1Q9NZU1 646 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 IKZF2Q9UKS7 526 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 ZNF490Q9ULM2 529 aaPredicted RBP6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 FLT4P35916 1363 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 DIP2AQ14689 1571 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 SLIT1O75093 1534 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 FCN3O75636 299 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 CYP7B1O75881 506 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 DCNP07585 359 aaKnown RBP6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 TSPAN8P19075 237 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 BGNP21810 368 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 SLCO1A2P46721 670 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 SELENBP1Q13228 472 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 MELKQ14680 651 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 BSXQ3C1V8 233 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 SLC36A2Q495M3 483 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 AKIRIN2Q53H80 203 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 SFT2D3Q587I9 215 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 PXDC1Q5TGL8 231 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 BHLHB9Q6PI77 547 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 NIPA1Q7RTP0 329 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 HORMAD1Q86X24 394 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 Q8N402 240 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 CNBD1Q8NA66 436 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 OR10A7Q8NGE5 316 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 FAM110BQ8TC76 370 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 C8orf44Q96CB5 159 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 PRMT6Q96LA8 375 aaPredicted RBP6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 TSC22D3Q99576 134 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 TIPINQ9BVW5 301 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 ZNF717Q9BY31 904 aaPredicted RBP6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 C11orf49Q9H6J7 331 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 ZNF282Q9UDV7 671 aaPredicted RBP6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 ALG6Q9Y672 507 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 CACNA1FO60840 1977 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 NRCAMQ92823 1304 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 NKX6-3A6NJ46 265 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 F8W036 122 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 VCYO14598 125 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 CHUKO15111 745 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 LDB3O75112 727 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 TNFAIP8O95379 198 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 ERBB2P04626 1255 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 CRYBB2P43320 205 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 NR0B1P51843 470 aaKnown RBP6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 ZP1P60852 638 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 ZXDBP98169 803 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 EGR3Q06889 387 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 IL18R1Q13478 541 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 GANABQ14697 944 aaKnown RBP6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 EIF2S3LQ2VIR3 472 aaKnown RBP6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 SPRYD7Q5W111 196 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 AADACL2Q6P093 401 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 G2E3Q7L622 706 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 NAXDQ8IW45 347 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 PUSL1Q8N0Z8 303 aaKnown RBP6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 SPEM1Q8N4L4 309 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 OR4D5Q8NGN0 318 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 MRGPRDQ8TDS7 321 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 TM9SF4Q92544 642 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 CTHRC1Q96CG8 243 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 RSPRY1Q96DX4 576 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 HOPXQ9BPY8 73 aaPredicted RBP6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 PCGF1Q9BSM1 259 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 ULBP1Q9BZM6 244 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 ILKAPQ9H0C8 392 aaPredicted RBP6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 ENKD1Q9H0I2 346 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 ACSL5Q9ULC5 683 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 PRPF19Q9UMS4 504 aaKnown RBP6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 B3GNT3Q9Y2A9 372 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 ARHGAP23Q9P227 1491 aa6.86□□□□□ -1.31
PDGFRA-206ENST00000508170 AFF2P51816 1311 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 PPIAL4CA0A0B4J2A2 164 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 A0A1B0GVG6 124 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 CYP26A1O43174 497 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 SYNGR3O43761 229 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 NDUFA7O95182 113 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 ANP32DO95626 131 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 HOXC6P09630 235 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 OCM2P0CE71 109 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 PPIAL4GP0DN37 164 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 HTR2CP28335 458 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 TMED10P49755 219 aaKnown RBP6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 RABGGTBP53611 331 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 UBXN2BQ14CS0 331 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 TBR1Q16650 682 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 ST3GAL2Q16842 350 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 ZSWIM7Q19AV6 140 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 FRMPD2BQ6IN97 320 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 RGMBQ6NW40 437 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 TMPRSS11AQ6ZMR5 421 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 MBOAT1Q6ZNC8 495 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms