RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 DNAJB9Q9UBS3 223 aa1.22□□□□□ -2.21
CLOCK-207ENST00000508049 NRBP1Q9UHY1 535 aa1.22□□□□□ -2.21
CLOCK-207ENST00000508049 GNPTGQ9UJJ9 305 aa1.22□□□□□ -2.21
CLOCK-207ENST00000508049 USP16Q9Y5T5 823 aa1.22□□□□□ -2.21
CLOCK-207ENST00000508049 SULT2B1O00204 365 aa1.21□□□□□ -2.22
CLOCK-207ENST00000508049 AKAP3O75969 853 aa1.21□□□□□ -2.22
CLOCK-207ENST00000508049 SLC35G4P0C7Q5 338 aa1.21□□□□□ -2.22
CLOCK-207ENST00000508049 ALPPL2P10696 532 aa1.21□□□□□ -2.22
CLOCK-207ENST00000508049 GCFC2P16383 781 aaKnown RBP1.21□□□□□ -2.22
CLOCK-207ENST00000508049 ADSSP30520 456 aa1.21□□□□□ -2.22
CLOCK-207ENST00000508049 GNPDA1P46926 289 aa1.21□□□□□ -2.22
CLOCK-207ENST00000508049 ASIC1P78348 528 aa1.21□□□□□ -2.22
CLOCK-207ENST00000508049 CCZ1BP86790 482 aa1.21□□□□□ -2.22
CLOCK-207ENST00000508049 CCZ1P86791 482 aaPredicted RBP1.21□□□□□ -2.22
CLOCK-207ENST00000508049 KLHL30Q0D2K2 578 aa1.21□□□□□ -2.22
CLOCK-207ENST00000508049 MEP1BQ16820 701 aa1.21□□□□□ -2.22
CLOCK-207ENST00000508049 ACSF3Q4G176 576 aaPredicted RBP1.21□□□□□ -2.22
CLOCK-207ENST00000508049 PVRIGQ6DKI7 326 aa1.21□□□□□ -2.22
CLOCK-207ENST00000508049 SHISA6Q6ZSJ9 500 aa1.21□□□□□ -2.22
CLOCK-207ENST00000508049 P4HA3Q7Z4N8 544 aa1.21□□□□□ -2.22
CLOCK-207ENST00000508049 PRSS42Q7Z5A4 293 aa1.21□□□□□ -2.22
CLOCK-207ENST00000508049 NDFIP1Q9BT67 221 aa1.21□□□□□ -2.22
CLOCK-207ENST00000508049 ABCG4Q9H172 646 aa1.21□□□□□ -2.22
CLOCK-207ENST00000508049 TRPV6Q9H1D0 765 aa1.21□□□□□ -2.22
CLOCK-207ENST00000508049 AKAP7Q9P0M2 348 aaPredicted RBP1.21□□□□□ -2.22
CLOCK-207ENST00000508049 ASF1AQ9Y294 204 aa1.21□□□□□ -2.22
CLOCK-207ENST00000508049 GMPPBQ9Y5P6 360 aa1.21□□□□□ -2.22
CLOCK-207ENST00000508049 IGSF9BQ9UPX0 1349 aa1.2□□□□□ -2.22
CLOCK-207ENST00000508049 RAD54L2Q9Y4B4 1467 aa1.2□□□□□ -2.22
CLOCK-207ENST00000508049 HELTA6NFD8 242 aa1.2□□□□□ -2.22
CLOCK-207ENST00000508049 FBLL1A6NHQ2 334 aaKnown RBP1.2□□□□□ -2.22
CLOCK-207ENST00000508049 FIBPO43427 364 aa1.2□□□□□ -2.22
CLOCK-207ENST00000508049 SS18L1O75177 396 aaPredicted RBP1.2□□□□□ -2.22
CLOCK-207ENST00000508049 TBCAO75347 108 aaKnown RBP1.2□□□□□ -2.22
CLOCK-207ENST00000508049 SLC10A7Q0GE19 358 aa1.2□□□□□ -2.22
CLOCK-207ENST00000508049 SRSF5Q13243 272 aaKnown RBP1.2□□□□□ -2.22
CLOCK-207ENST00000508049 NRF1Q16656 503 aa1.2□□□□□ -2.22
CLOCK-207ENST00000508049 COX19Q49B96 90 aa1.2□□□□□ -2.22
CLOCK-207ENST00000508049 C1orf146Q5VVC0 180 aa1.2□□□□□ -2.22
CLOCK-207ENST00000508049 OR8G2PQ6IF36 304 aa1.2□□□□□ -2.22
CLOCK-207ENST00000508049 ZNF621Q6ZSS3 439 aa1.2□□□□□ -2.22
CLOCK-207ENST00000508049 PCP2Q8IVA1 136 aa1.2□□□□□ -2.22
CLOCK-207ENST00000508049 RAET1EQ8TD07 263 aa1.2□□□□□ -2.22
CLOCK-207ENST00000508049 CALHM2Q9HA72 323 aa1.2□□□□□ -2.22
CLOCK-207ENST00000508049 SOHLH2Q9NX45 425 aa1.2□□□□□ -2.22
CLOCK-207ENST00000508049 DEC1Q9P2X7 70 aa1.2□□□□□ -2.22
CLOCK-207ENST00000508049 GALPQ9UBC7 116 aa1.2□□□□□ -2.22
CLOCK-207ENST00000508049 COPS7AQ9UBW8 275 aa1.2□□□□□ -2.22
CLOCK-207ENST00000508049 ANGPTL2Q9UKU9 493 aa1.2□□□□□ -2.22
CLOCK-207ENST00000508049 PLA2G4CQ9UP65 541 aa1.2□□□□□ -2.22
CLOCK-207ENST00000508049 PDS5BQ9NTI5 1447 aa1.2□□□□□ -2.22
CLOCK-207ENST00000508049 ESYT2A0FGR8 921 aa1.19□□□□□ -2.22
CLOCK-207ENST00000508049 MSH4O15457 936 aa1.19□□□□□ -2.22
CLOCK-207ENST00000508049 NME2P1O60361 137 aa1.19□□□□□ -2.22
CLOCK-207ENST00000508049 CTNNA1P35221 906 aaKnown RBP1.19□□□□□ -2.22
CLOCK-207ENST00000508049 PITPNBP48739 271 aa1.19□□□□□ -2.22
CLOCK-207ENST00000508049 CASP9P55211 416 aa1.19□□□□□ -2.22
CLOCK-207ENST00000508049 MRPS6P82932 125 aaKnown RBP1.19□□□□□ -2.22
CLOCK-207ENST00000508049 NME3Q13232 169 aa1.19□□□□□ -2.22
CLOCK-207ENST00000508049 TAF9Q16594 264 aa1.19□□□□□ -2.22
CLOCK-207ENST00000508049 SPIN3Q5JUX0 258 aa1.19□□□□□ -2.22
CLOCK-207ENST00000508049 RAET1LQ5VY80 246 aa1.19□□□□□ -2.22
CLOCK-207ENST00000508049 ZNF562Q6V9R5 426 aa1.19□□□□□ -2.22
CLOCK-207ENST00000508049 RFLNAQ6ZTI6 216 aa1.19□□□□□ -2.22
CLOCK-207ENST00000508049 GOLGA7Q7Z5G4 137 aa1.19□□□□□ -2.22
CLOCK-207ENST00000508049 NET1Q7Z628 596 aaPredicted RBP1.19□□□□□ -2.22
CLOCK-207ENST00000508049 RALGPS2Q86X27 583 aaPredicted RBP1.19□□□□□ -2.22
CLOCK-207ENST00000508049 NRMQ8IXM6 262 aa1.19□□□□□ -2.22
CLOCK-207ENST00000508049 Q8N976 141 aa1.19□□□□□ -2.22
CLOCK-207ENST00000508049 NEK11Q8NG66 645 aa1.19□□□□□ -2.22
CLOCK-207ENST00000508049 WDR36Q8NI36 951 aaKnown RBP1.19□□□□□ -2.22
CLOCK-207ENST00000508049 SLC5A11Q8WWX8 675 aa1.19□□□□□ -2.22
CLOCK-207ENST00000508049 RBMXL1Q96E39 390 aaKnown RBP1.19□□□□□ -2.22
CLOCK-207ENST00000508049 NDUFAF3Q9BU61 184 aa1.19□□□□□ -2.22
CLOCK-207ENST00000508049 CDC42EP4Q9H3Q1 356 aaKnown RBP1.19□□□□□ -2.22
CLOCK-207ENST00000508049 PPDPFQ9H3Y8 114 aa1.19□□□□□ -2.22
CLOCK-207ENST00000508049 AKIRIN1Q9H9L7 192 aaPredicted RBP1.19□□□□□ -2.22
CLOCK-207ENST00000508049 MAD2L2Q9UI95 211 aa1.19□□□□□ -2.22
CLOCK-207ENST00000508049 FRMPD3Q5JV73 1810 aa1.19□□□□□ -2.22
CLOCK-207ENST00000508049 CASKO14936 926 aa1.18□□□□□ -2.22
CLOCK-207ENST00000508049 SCG2P13521 617 aa1.18□□□□□ -2.22
CLOCK-207ENST00000508049 NOVA1P51513 510 aaKnown RBP1.18□□□□□ -2.22
CLOCK-207ENST00000508049 CCL11P51671 97 aa1.18□□□□□ -2.22
CLOCK-207ENST00000508049 HERVK_113P63132 956 aa1.18□□□□□ -2.22
CLOCK-207ENST00000508049 ERVK-8P63133 956 aa1.18□□□□□ -2.22
CLOCK-207ENST00000508049 ENPEPQ07075 957 aa1.18□□□□□ -2.22
CLOCK-207ENST00000508049 C17orf67Q0P5P2 114 aa1.18□□□□□ -2.22
CLOCK-207ENST00000508049 KCTD9Q7L273 389 aa1.18□□□□□ -2.22
CLOCK-207ENST00000508049 YRDCQ86U90 279 aaKnown RBP1.18□□□□□ -2.22
CLOCK-207ENST00000508049 NKAPP1Q8N9T2 125 aa1.18□□□□□ -2.22
CLOCK-207ENST00000508049 NPBQ8NG41 125 aa1.18□□□□□ -2.22
CLOCK-207ENST00000508049 SYNPRQ8TBG9 265 aa1.18□□□□□ -2.22
CLOCK-207ENST00000508049 OR10C1Q96KK4 312 aa1.18□□□□□ -2.22
CLOCK-207ENST00000508049 MCHR1Q99705 422 aa1.18□□□□□ -2.22
CLOCK-207ENST00000508049 ERVK-6Q9BXR3 956 aa1.18□□□□□ -2.22
CLOCK-207ENST00000508049 OR11A1Q9GZK7 315 aa1.18□□□□□ -2.22
CLOCK-207ENST00000508049 PIGVQ9NUD9 493 aa1.18□□□□□ -2.22
CLOCK-207ENST00000508049 SLC25A37Q9NYZ2 338 aa1.18□□□□□ -2.22
CLOCK-207ENST00000508049 TET2Q6N021 2002 aaPredicted RBP1.18□□□□□ -2.22
CLOCK-207ENST00000508049 TTC26A0AVF1 554 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms