RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 H0YCG3 227 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 K7EQM0 130 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 TNFSF11O14788 317 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 MAGEB3O15480 346 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 UGT2B17O75795 530 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 SERF1AO75920 110 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 RHOBTB1O94844 696 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 STSP08842 583 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 H2BFMP0C1H6 154 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 IQCF3P0C7M6 154 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 P0C879 139 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 PRG2P13727 222 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 UQCRC2P22695 453 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 EPHX2P34913 555 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 HPCAL1P37235 193 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 PPT1P50897 306 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 OC90Q02509 493 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 BCL2L1Q07817 233 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 MXD4Q14582 209 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 GGTA1PQ4G0N0 100 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 PRR30Q53SZ7 412 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 OR2B11Q5JQS5 317 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 CFAP157Q5JU67 520 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 RSBN1Q5VWQ0 802 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 PYHIN1Q6K0P9 492 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 FAM71F2Q6NXP2 309 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 DNM1P46Q6ZS02 220 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 UBQLNLQ8IYU4 475 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 SPAG16Q8N0X2 631 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 MTURNQ8N3F0 131 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 SYT14Q8NB59 555 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 IPMKQ8NFU5 416 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 OR10A7Q8NGE5 316 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 OR2A12Q8NGT7 310 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 RLN3Q8WXF3 142 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 FAM3CQ92520 227 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 HAVCR1Q96D42 359 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 C7orf34Q96L11 122 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 NOL4LQ96MY1 436 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 ZNF607Q96SK3 696 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 CYP2S1Q96SQ9 504 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 TXN2Q99757 166 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 POLR1EQ9GZS1 481 aaKnown RBP2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 NXF5Q9H1B4 397 aaKnown RBP2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 Q9H3A6 140 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 ZNF702PQ9H963 129 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 OR1A1Q9P1Q5 309 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 TMCC3Q9ULS5 477 aa2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 MRPS33Q9Y291 106 aaKnown RBP2.98□□□□□ -1.93
HMGB1P28-201ENST00000507778 IGHV2-70DA0A0C4DH43 119 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 SMIM28A0A1B0GU29 152 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 PP2D1A8MPX8 630 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 BTN3A3O00478 584 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 LRATO95237 230 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 CA1P00915 261 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 VDAC1P21796 283 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 NMT1P30419 496 aaKnown RBP2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 GCKP35557 465 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 OR3A4PP47883 348 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 MESDQ14696 234 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 LIPNQ5VXI9 398 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 TTC23Q5W5X9 447 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 FAM199XQ6PEV8 388 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 KCNIP4Q6PIL6 250 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 TFAP2EQ6VUC0 442 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 SYT10Q6XYQ8 523 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 FRA10AC1Q70Z53 315 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 TRPM8Q7Z2W7 1104 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 PPP1R42Q7Z4L9 355 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 FBXO16Q8IX29 292 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 ZNF683Q8IZ20 524 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 SLC38A6Q8IZM9 456 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 OR2T3Q8NH03 318 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 TRMT10AQ8TBZ6 339 aaKnown RBP2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 FGGYQ96C11 551 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 SH3YL1Q96HL8 342 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 CELF6Q96J87 481 aaKnown RBP2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 MS4A14Q96JA4 679 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 AMDHD1Q96NU7 426 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 SLITRK2Q9H156 845 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 GLIPR2Q9H4G4 154 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 FANCFQ9NPI8 374 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 PRR34Q9NV39 138 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 TP53TG3Q9ULZ0 132 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 CA5BQ9Y2D0 317 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 MAB21L2Q9Y586 359 aa2.97□□□□□ -1.93
HMGB1P28-201ENST00000507778 E7ENQ6 273 aa2.96□□□□□ -1.94
HMGB1P28-201ENST00000507778 G3V4G9 280 aa2.96□□□□□ -1.94
HMGB1P28-201ENST00000507778 SULT2B1O00204 365 aa2.96□□□□□ -1.94
HMGB1P28-201ENST00000507778 CYP2B6P20813 491 aa2.96□□□□□ -1.94
HMGB1P28-201ENST00000507778 HNF1AP20823 631 aa2.96□□□□□ -1.94
HMGB1P28-201ENST00000507778 CALRP27797 417 aaKnown RBP2.96□□□□□ -1.94
HMGB1P28-201ENST00000507778 CD80P33681 288 aa2.96□□□□□ -1.94
HMGB1P28-201ENST00000507778 KIR2DS2P43631 304 aa2.96□□□□□ -1.94
HMGB1P28-201ENST00000507778 SLC26A2P50443 739 aa2.96□□□□□ -1.94
HMGB1P28-201ENST00000507778 SPIBQ01892 262 aa2.96□□□□□ -1.94
HMGB1P28-201ENST00000507778 SLC10A7Q0GE19 358 aa2.96□□□□□ -1.94
HMGB1P28-201ENST00000507778 LRRC36Q1X8D7 754 aa2.96□□□□□ -1.94
HMGB1P28-201ENST00000507778 ISXQ2M1V0 245 aa2.96□□□□□ -1.94
HMGB1P28-201ENST00000507778 FHL5Q5TD97 284 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms