RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 B8ZZF3 427 aa18.26■□□□□ 0.51
USP53-203ENST00000507597 FAAHO00519 579 aa18.26■□□□□ 0.51
USP53-203ENST00000507597 SUSD5O60279 629 aa18.26■□□□□ 0.51
USP53-203ENST00000507597 HK1P19367 917 aa18.26■□□□□ 0.51
USP53-203ENST00000507597 ADH6P28332 368 aa18.26■□□□□ 0.51
USP53-203ENST00000507597 RFC3P40938 356 aa18.26■□□□□ 0.51
USP53-203ENST00000507597 SELENOWP63302 87 aa18.26■□□□□ 0.51
USP53-203ENST00000507597 TRAP1Q12931 704 aaKnown RBP18.26■□□□□ 0.51
USP53-203ENST00000507597 SKP2Q13309 424 aa18.26■□□□□ 0.51
USP53-203ENST00000507597 CEACAM7Q14002 265 aa18.26■□□□□ 0.51
USP53-203ENST00000507597 FXNQ16595 210 aa18.26■□□□□ 0.51
USP53-203ENST00000507597 RANBP3LQ86VV4 465 aaPredicted RBP18.26■□□□□ 0.51
USP53-203ENST00000507597 GHDCQ8N2G8 530 aa18.26■□□□□ 0.51
USP53-203ENST00000507597 SMYD1Q8NB12 490 aa18.26■□□□□ 0.51
USP53-203ENST00000507597 OR52E4Q8NGH9 312 aa18.26■□□□□ 0.51
USP53-203ENST00000507597 ST8SIA1Q92185 356 aa18.26■□□□□ 0.51
USP53-203ENST00000507597 ASB9Q96DX5 294 aa18.26■□□□□ 0.51
USP53-203ENST00000507597 RTN4RQ9BZR6 473 aa18.26■□□□□ 0.51
USP53-203ENST00000507597 OR2B2Q9GZK3 357 aa18.26■□□□□ 0.51
USP53-203ENST00000507597 DNAJB12Q9NXW2 375 aaKnown RBP18.26■□□□□ 0.51
USP53-203ENST00000507597 ACTR3BQ9P1U1 418 aa18.26■□□□□ 0.51
USP53-203ENST00000507597 FBXL2Q9UKC9 423 aa18.26■□□□□ 0.51
USP53-203ENST00000507597 ICAM5Q9UMF0 924 aa18.26■□□□□ 0.51
USP53-203ENST00000507597 USP22Q9UPT9 525 aa18.26■□□□□ 0.51
USP53-203ENST00000507597 ITPR1Q14643 2758 aa18.25■□□□□ 0.51
USP53-203ENST00000507597 TRGV5A0A0B4J1U4 118 aa18.25■□□□□ 0.51
USP53-203ENST00000507597 CENPVL1A0A0U1RR11 272 aa18.25■□□□□ 0.51
USP53-203ENST00000507597 NPIPA5E9PKD4 350 aa18.25■□□□□ 0.51
USP53-203ENST00000507597 LGI1O95970 557 aa18.25■□□□□ 0.51
USP53-203ENST00000507597 FESP07332 822 aa18.25■□□□□ 0.51
USP53-203ENST00000507597 GP1BBP13224 206 aa18.25■□□□□ 0.51
USP53-203ENST00000507597 HTR3AP46098 478 aa18.25■□□□□ 0.51
USP53-203ENST00000507597 RGS8P57771 180 aaPredicted RBP18.25■□□□□ 0.51
USP53-203ENST00000507597 DMTNQ08495 405 aa18.25■□□□□ 0.51
USP53-203ENST00000507597 CYBRD1Q53TN4 286 aa18.25■□□□□ 0.51
USP53-203ENST00000507597 ARHGAP11AQ6P4F7 1023 aa18.25■□□□□ 0.51
USP53-203ENST00000507597 FKBP9P1Q75LS8 142 aa18.25■□□□□ 0.51
USP53-203ENST00000507597 CBLL1Q75N03 491 aa18.25■□□□□ 0.51
USP53-203ENST00000507597 HMGN2P46Q86SG4 172 aa18.25■□□□□ 0.51
USP53-203ENST00000507597 DHFR2Q86XF0 187 aa18.25■□□□□ 0.51
USP53-203ENST00000507597 GPR119Q8TDV5 335 aa18.25■□□□□ 0.51
USP53-203ENST00000507597 CNOT9Q92600 299 aaKnown RBP18.25■□□□□ 0.51
USP53-203ENST00000507597 TAMM41Q96BW9 452 aa18.25■□□□□ 0.51
USP53-203ENST00000507597 GPR137Q96N19 417 aa18.25■□□□□ 0.51
USP53-203ENST00000507597 DEFB127Q9H1M4 99 aa18.25■□□□□ 0.51
USP53-203ENST00000507597 SERINC1Q9NRX5 453 aa18.25■□□□□ 0.51
USP53-203ENST00000507597 SELENONQ9NZV5 590 aa18.25■□□□□ 0.51
USP53-203ENST00000507597 RPS6KB2Q9UBS0 482 aa18.25■□□□□ 0.51
USP53-203ENST00000507597 PACSIN3Q9UKS6 424 aa18.25■□□□□ 0.51
USP53-203ENST00000507597 NPIPA1Q9UND3 350 aa18.25■□□□□ 0.51
USP53-203ENST00000507597 PIEZO2Q9H5I5 2752 aa18.24■□□□□ 0.51
USP53-203ENST00000507597 CLDN24A6NM45 220 aa18.24■□□□□ 0.51
USP53-203ENST00000507597 AP3D1O14617 1153 aa18.24■□□□□ 0.51
USP53-203ENST00000507597 ADAM10O14672 748 aa18.24■□□□□ 0.51
USP53-203ENST00000507597 CDC40O60508 579 aaKnown RBP eCLIP18.24■□□□□ 0.51
USP53-203ENST00000507597 GCM2O75603 506 aaPredicted RBP18.24■□□□□ 0.51
USP53-203ENST00000507597 ZNF682O95780 498 aa18.24■□□□□ 0.51
USP53-203ENST00000507597 SERPINA1P01009 418 aa18.24■□□□□ 0.51
USP53-203ENST00000507597 OPN1SWP03999 348 aa18.24■□□□□ 0.51
USP53-203ENST00000507597 RFPL3SP0C7P2 107 aa18.24■□□□□ 0.51
USP53-203ENST00000507597 EDN3P14138 238 aa18.24■□□□□ 0.51
USP53-203ENST00000507597 ZNF17P17021 662 aa18.24■□□□□ 0.51
USP53-203ENST00000507597 HOXB6P17509 224 aaKnown RBP18.24■□□□□ 0.51
USP53-203ENST00000507597 FKBP2P26885 142 aaKnown RBP18.24■□□□□ 0.51
USP53-203ENST00000507597 RYKP34925 604 aa18.24■□□□□ 0.51
USP53-203ENST00000507597 DUSP7Q16829 419 aa18.24■□□□□ 0.51
USP53-203ENST00000507597 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.24■□□□□ 0.51
USP53-203ENST00000507597 CBLN3Q6UW01 205 aa18.24■□□□□ 0.51
USP53-203ENST00000507597 ENPP6Q6UWR7 440 aa18.24■□□□□ 0.51
USP53-203ENST00000507597 CLIP4Q8N3C7 705 aa18.24■□□□□ 0.51
USP53-203ENST00000507597 FAM156AQ8NDB6 213 aa18.24■□□□□ 0.51
USP53-203ENST00000507597 FAM83FQ8NEG4 500 aaPredicted RBP18.24■□□□□ 0.51
USP53-203ENST00000507597 TPD52L3Q96J77 140 aa18.24■□□□□ 0.51
USP53-203ENST00000507597 MRGPRX4Q96LA9 322 aa18.24■□□□□ 0.51
USP53-203ENST00000507597 ZNF559Q9BR84 538 aa18.24■□□□□ 0.51
USP53-203ENST00000507597 TRIM2Q9C040 744 aa18.24■□□□□ 0.51
USP53-203ENST00000507597 TMEM27Q9HBJ8 222 aa18.24■□□□□ 0.51
USP53-203ENST00000507597 MED17Q9NVC6 651 aa18.24■□□□□ 0.51
USP53-203ENST00000507597 ASF1BQ9NVP2 202 aa18.24■□□□□ 0.51
USP53-203ENST00000507597 RLIMQ9NVW2 624 aa18.24■□□□□ 0.51
USP53-203ENST00000507597 TESQ9UGI8 421 aaKnown RBP18.24■□□□□ 0.51
USP53-203ENST00000507597 C7orf72A4D263 438 aa18.23■□□□□ 0.51
USP53-203ENST00000507597 GMFGO60234 142 aa18.23■□□□□ 0.51
USP53-203ENST00000507597 PDE5AO76074 875 aa18.23■□□□□ 0.51
USP53-203ENST00000507597 ACTL6AO96019 429 aa18.23■□□□□ 0.51
USP53-203ENST00000507597 IGHG3P01860 377 aa18.23■□□□□ 0.51
USP53-203ENST00000507597 NCK1P16333 377 aa18.23■□□□□ 0.51
USP53-203ENST00000507597 CHMP24386 653 aa18.23■□□□□ 0.51
USP53-203ENST00000507597 EPS8Q12929 822 aa18.23■□□□□ 0.51
USP53-203ENST00000507597 RAET1LQ5VY80 246 aa18.23■□□□□ 0.51
USP53-203ENST00000507597 ZNF324BQ6AW86 544 aaPredicted RBP18.23■□□□□ 0.51
USP53-203ENST00000507597 WBP2NLQ6ICG8 309 aa18.23■□□□□ 0.51
USP53-203ENST00000507597 SIAH3Q8IW03 269 aa18.23■□□□□ 0.51
USP53-203ENST00000507597 NEIL3Q8TAT5 605 aa18.23■□□□□ 0.51
USP53-203ENST00000507597 SARAFQ96BY9 339 aa18.23■□□□□ 0.51
USP53-203ENST00000507597 SFXN2Q96NB2 322 aa18.23■□□□□ 0.51
USP53-203ENST00000507597 BARD1Q99728 777 aaKnown RBP18.23■□□□□ 0.51
USP53-203ENST00000507597 CADM1Q9BY67 442 aaKnown RBP18.23■□□□□ 0.51
USP53-203ENST00000507597 POLR2J2Q9GZM3 115 aaKnown RBP18.23■□□□□ 0.51
USP53-203ENST00000507597 POLR2J3Q9H1A7 115 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms