RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 OPN1LWP04000 364 aa16.08■□□□□ 0.16
SMN1-204ENST00000506163 TFPTP0C1Z6 253 aa16.08■□□□□ 0.16
SMN1-204ENST00000506163 POU3F2P20265 443 aaPredicted RBP16.08■□□□□ 0.16
SMN1-204ENST00000506163 PGM1P36871 562 aa16.08■□□□□ 0.16
SMN1-204ENST00000506163 IRX1P78414 480 aaPredicted RBP16.08■□□□□ 0.16
SMN1-204ENST00000506163 TXNL4AP83876 142 aaKnown RBP16.08■□□□□ 0.16
SMN1-204ENST00000506163 FGFBP1Q14512 234 aa16.08■□□□□ 0.16
SMN1-204ENST00000506163 RGNQ15493 299 aa16.08■□□□□ 0.16
SMN1-204ENST00000506163 METTL21CQ5VZV1 264 aa16.08■□□□□ 0.16
SMN1-204ENST00000506163 LRRC74BQ6ZQY2 392 aa16.08■□□□□ 0.16
SMN1-204ENST00000506163 GGNQ86UU5 652 aa16.08■□□□□ 0.16
SMN1-204ENST00000506163 LACC1Q8IV20 430 aa16.08■□□□□ 0.16
SMN1-204ENST00000506163 MBD3L2Q8NHZ7 208 aaPredicted RBP16.08■□□□□ 0.16
SMN1-204ENST00000506163 SLC38A5Q8WUX1 472 aa16.08■□□□□ 0.16
SMN1-204ENST00000506163 ASB5Q8WWX0 329 aa16.08■□□□□ 0.16
SMN1-204ENST00000506163 RNF145Q96MT1 663 aa16.08■□□□□ 0.16
SMN1-204ENST00000506163 LAT2Q9GZY6 243 aa16.08■□□□□ 0.16
SMN1-204ENST00000506163 HCFC1P51610 2035 aa16.08■□□□□ 0.16
SMN1-204ENST00000506163 C7orf72A4D263 438 aa16.07■□□□□ 0.16
SMN1-204ENST00000506163 AGAP5A6NIR3 686 aa16.07■□□□□ 0.16
SMN1-204ENST00000506163 FAM90A27PA6NNH2 459 aa16.07■□□□□ 0.16
SMN1-204ENST00000506163 H3BNH8 94 aa16.07■□□□□ 0.16
SMN1-204ENST00000506163 EIF4E2O60573 245 aaKnown RBP16.07■□□□□ 0.16
SMN1-204ENST00000506163 TGM6O95932 706 aa16.07■□□□□ 0.16
SMN1-204ENST00000506163 CSTAP01040 98 aa16.07■□□□□ 0.16
SMN1-204ENST00000506163 NR2F1P10589 423 aa16.07■□□□□ 0.16
SMN1-204ENST00000506163 UBL4AP11441 157 aa16.07■□□□□ 0.16
SMN1-204ENST00000506163 PEPDP12955 493 aa16.07■□□□□ 0.16
SMN1-204ENST00000506163 RPS4Y1P22090 263 aaKnown RBP16.07■□□□□ 0.16
SMN1-204ENST00000506163 SHC1P29353 583 aa16.07■□□□□ 0.16
SMN1-204ENST00000506163 ZNF41P51814 821 aaPredicted RBP16.07■□□□□ 0.16
SMN1-204ENST00000506163 ZNF136P52737 540 aa16.07■□□□□ 0.16
SMN1-204ENST00000506163 ARFIP2P53365 341 aa16.07■□□□□ 0.16
SMN1-204ENST00000506163 FOXF1Q12946 379 aa16.07■□□□□ 0.16
SMN1-204ENST00000506163 FAM71CQ8NEG0 241 aa16.07■□□□□ 0.16
SMN1-204ENST00000506163 OR5W2Q8NH69 310 aa16.07■□□□□ 0.16
SMN1-204ENST00000506163 ZNF845Q96IR2 970 aaPredicted RBP16.07■□□□□ 0.16
SMN1-204ENST00000506163 RSPO3Q9BXY4 272 aaPredicted RBP16.07■□□□□ 0.16
SMN1-204ENST00000506163 RABEP2Q9H5N1 569 aa16.07■□□□□ 0.16
SMN1-204ENST00000506163 HHATLQ9HCP6 504 aa16.07■□□□□ 0.16
SMN1-204ENST00000506163 TRIM33Q9UPN9 1127 aa16.07■□□□□ 0.16
SMN1-204ENST00000506163 LINC01387J3KSC0 135 aa16.06■□□□□ 0.16
SMN1-204ENST00000506163 CYP7B1O75881 506 aa16.06■□□□□ 0.16
SMN1-204ENST00000506163 NTN1O95631 604 aa16.06■□□□□ 0.16
SMN1-204ENST00000506163 UBTFL6P0CB48 400 aaPredicted RBP16.06■□□□□ 0.16
SMN1-204ENST00000506163 TROVE2P10155 538 aaKnown RBP eCLIP16.06■□□□□ 0.16
SMN1-204ENST00000506163 BMP2P12643 396 aa16.06■□□□□ 0.16
SMN1-204ENST00000506163 ZNF17P17021 662 aa16.06■□□□□ 0.16
SMN1-204ENST00000506163 PRKCAP17252 672 aa16.06■□□□□ 0.16
SMN1-204ENST00000506163 MAGEA8P43361 318 aa16.06■□□□□ 0.16
SMN1-204ENST00000506163 AGFG1P52594 562 aaKnown RBP16.06■□□□□ 0.16
SMN1-204ENST00000506163 DSTNP60981 165 aa16.06■□□□□ 0.16
SMN1-204ENST00000506163 KCNJ10P78508 379 aa16.06■□□□□ 0.16
SMN1-204ENST00000506163 FOXF2Q12947 444 aa16.06■□□□□ 0.16
SMN1-204ENST00000506163 CTU2Q2VPK5 515 aaKnown RBP16.06■□□□□ 0.16
SMN1-204ENST00000506163 RPS26P11Q5JNZ5 115 aaPredicted RBP16.06■□□□□ 0.16
SMN1-204ENST00000506163 ACBD4Q8NC06 268 aa16.06■□□□□ 0.16
SMN1-204ENST00000506163 RELL2Q8NC24 303 aaPredicted RBP16.06■□□□□ 0.16
SMN1-204ENST00000506163 FBXO27Q8NI29 283 aa16.06■□□□□ 0.16
SMN1-204ENST00000506163 SMPDL3BQ92485 455 aa16.06■□□□□ 0.16
SMN1-204ENST00000506163 CNOT9Q92600 299 aaKnown RBP16.06■□□□□ 0.16
SMN1-204ENST00000506163 MAL2Q969L2 176 aa16.06■□□□□ 0.16
SMN1-204ENST00000506163 ZBTB8AQ96BR9 441 aa16.06■□□□□ 0.16
SMN1-204ENST00000506163 ADGRG7Q96K78 797 aa16.06■□□□□ 0.16
SMN1-204ENST00000506163 THUMPD3Q9BV44 507 aaKnown RBP16.06■□□□□ 0.16
SMN1-204ENST00000506163 TMEM185BQ9H7F4 350 aa16.06■□□□□ 0.16
SMN1-204ENST00000506163 MTHFD2LQ9H903 347 aaPredicted RBP16.06■□□□□ 0.16
SMN1-204ENST00000506163 NPDC1Q9NQX5 325 aaPredicted RBP16.06■□□□□ 0.16
SMN1-204ENST00000506163 SAR1AQ9NR31 198 aa16.06■□□□□ 0.16
SMN1-204ENST00000506163 GMEB1Q9Y692 573 aa16.06■□□□□ 0.16
SMN1-204ENST00000506163 AP4B1Q9Y6B7 739 aa16.06■□□□□ 0.16
SMN1-204ENST00000506163 DSPPQ9NZW4 1301 aa16.06■□□□□ 0.16
SMN1-204ENST00000506163 ETV2O00321 342 aaPredicted RBP16.05■□□□□ 0.16
SMN1-204ENST00000506163 FBP2O00757 339 aa16.05■□□□□ 0.16
SMN1-204ENST00000506163 SEC14L5O43304 696 aa16.05■□□□□ 0.16
SMN1-204ENST00000506163 ANXA11P50995 505 aaKnown RBP16.05■□□□□ 0.16
SMN1-204ENST00000506163 SUMO3P55854 103 aaPredicted RBP16.05■□□□□ 0.16
SMN1-204ENST00000506163 QPRTQ15274 297 aa16.05■□□□□ 0.16
SMN1-204ENST00000506163 SF3B4Q15427 424 aaKnown RBP eCLIP16.05■□□□□ 0.16
SMN1-204ENST00000506163 EIF3MQ7L2H7 374 aaKnown RBP16.05■□□□□ 0.16
SMN1-204ENST00000506163 DPP10Q8N608 796 aa16.05■□□□□ 0.16
SMN1-204ENST00000506163 C10orf82Q8WW14 230 aa16.05■□□□□ 0.16
SMN1-204ENST00000506163 FIG4Q92562 907 aa16.05■□□□□ 0.16
SMN1-204ENST00000506163 WNT2BQ93097 391 aa16.05■□□□□ 0.16
SMN1-204ENST00000506163 TMEM19Q96HH6 336 aa16.05■□□□□ 0.16
SMN1-204ENST00000506163 TRIM8Q9BZR9 551 aa16.05■□□□□ 0.16
SMN1-204ENST00000506163 ITPR2Q14571 2701 aa16.05■□□□□ 0.16
SMN1-204ENST00000506163 A0A0J9YW62 118 aa16.04■□□□□ 0.16
SMN1-204ENST00000506163 HSPB2A8KAH6 182 aa16.04■□□□□ 0.16
SMN1-204ENST00000506163 NUDT14O95848 222 aa16.04■□□□□ 0.16
SMN1-204ENST00000506163 IL2RAP01589 272 aa16.04■□□□□ 0.16
SMN1-204ENST00000506163 BCHEP06276 602 aa16.04■□□□□ 0.16
SMN1-204ENST00000506163 GYS2P54840 703 aa16.04■□□□□ 0.16
SMN1-204ENST00000506163 RAC1P63000 192 aa16.04■□□□□ 0.16
SMN1-204ENST00000506163 HSPB2Q16082 182 aa16.04■□□□□ 0.16
SMN1-204ENST00000506163 RUNDC3AQ59EK9 446 aa16.04■□□□□ 0.16
SMN1-204ENST00000506163 MEIOBQ8N635 442 aa16.04■□□□□ 0.16
SMN1-204ENST00000506163 TMCO5AQ8N6Q1 288 aa16.04■□□□□ 0.16
SMN1-204ENST00000506163 METTL25Q8N6Q8 603 aa16.04■□□□□ 0.16
SMN1-204ENST00000506163 OIT3Q8WWZ8 545 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms