RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 GRIA1P42261 906 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 SLC1A3P43003 542 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 FNTAP49354 379 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 VPS41P49754 854 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 SEC24CP53992 1094 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 MANFP55145 182 aaKnown RBP2.8□□□□□ -1.96
TCOF1-208ENST00000506063 RAB10P61026 200 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 SEC61A1P61619 476 aaKnown RBP2.8□□□□□ -1.96
TCOF1-208ENST00000506063 RAC1P63000 192 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 TIAL1Q01085 375 aaKnown RBP eCLIP2.8□□□□□ -1.96
TCOF1-208ENST00000506063 DHX9Q08211 1270 aaKnown RBP2.8□□□□□ -1.96
TCOF1-208ENST00000506063 HNRNPA0Q13151 305 aaKnown RBP2.8□□□□□ -1.96
TCOF1-208ENST00000506063 BIKQ13323 160 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 DCTN2Q13561 401 aaKnown RBP2.8□□□□□ -1.96
TCOF1-208ENST00000506063 SNX1Q13596 522 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 RCN2Q14257 317 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 RBBP5Q15291 538 aaKnown RBP2.8□□□□□ -1.96
TCOF1-208ENST00000506063 PPP1R7Q15435 360 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 NSUN5P1Q3KNT7 163 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 CT45A2Q5DJT8 189 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 LGSNQ5TDP6 509 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 FBXW9Q5XUX1 488 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 HLA-DQA1Q5Y7H0 255 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 HBMQ6B0K9 141 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 CLEC6AQ6EIG7 209 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 GTF2IRD2BQ6EKJ0 949 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 ZNF662Q6ZS27 426 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 FCRLAQ7L513 359 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 SPATA21Q7Z572 469 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 TMPRSS11BQ86T26 416 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 GTF2IRD2Q86UP8 949 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 SBSPONQ8IVN8 264 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 MPP5Q8N3R9 675 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 GTPBP8Q8N3Z3 284 aaPredicted RBP2.8□□□□□ -1.96
TCOF1-208ENST00000506063 RPP25LQ8N5L8 163 aaKnown RBP2.8□□□□□ -1.96
TCOF1-208ENST00000506063 POU5F2Q8N7G0 328 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 ZNF527Q8NB42 609 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 OR52E2Q8NGJ4 325 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 OR10S1Q8NGN2 331 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.8□□□□□ -1.96
TCOF1-208ENST00000506063 CD200R1Q8TD46 325 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 TANKQ92844 425 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 ZNF775Q96BV0 537 aaPredicted RBP2.8□□□□□ -1.96
TCOF1-208ENST00000506063 R3HDM4Q96D70 268 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 TRIM44Q96DX7 344 aaPredicted RBP2.8□□□□□ -1.96
TCOF1-208ENST00000506063 BOD1Q96IK1 185 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 ITCHQ96J02 903 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 SLC38A2Q96QD8 506 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 F2RL3Q96RI0 385 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 ADOQ96SZ5 270 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 NAPGQ99747 312 aaPredicted RBP2.8□□□□□ -1.96
TCOF1-208ENST00000506063 AIF1LQ9BQI0 150 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 ZNF416Q9BWM5 594 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 SORBS1Q9BX66 1292 aaKnown RBP2.8□□□□□ -1.96
TCOF1-208ENST00000506063 ZNF717Q9BY31 904 aaPredicted RBP2.8□□□□□ -1.96
TCOF1-208ENST00000506063 PCDHAC1Q9H158 963 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 CCDC68Q9H2F9 335 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 RPF2Q9H7B2 306 aaKnown RBP2.8□□□□□ -1.96
TCOF1-208ENST00000506063 TMEM185BQ9H7F4 350 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 DYNLRB1Q9NP97 96 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 RAB6BQ9NRW1 208 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 TREX1Q9NSU2 369 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 CATSPERZQ9NTU4 200 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 PPP4R1LQ9P1A2 415 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 MYEF2Q9P2K5 600 aaKnown RBP2.8□□□□□ -1.96
TCOF1-208ENST00000506063 ANAPC5Q9UJX4 755 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 JRKLQ9Y4A0 524 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 CACNG2Q9Y698 323 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 DNAH6Q9C0G6 4158 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 HMCN2Q8NDA2 5059 aa2.8□□□□□ -1.96
TCOF1-208ENST00000506063 APOBP04114 4563 aaKnown RBP2.8□□□□□ -1.96
TCOF1-208ENST00000506063 IGKV3D-15A0A087WSY6 115 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 A0A088AWK7 358 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 A0A1W2PR48 441 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 CIB4A0PJX0 185 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 FAM187AA6NFU0 413 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 ZNF724A8MTY0 619 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 H0YHG0 523 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 TNFRSF13BO14836 293 aaPredicted RBP2.79□□□□□ -1.96
TCOF1-208ENST00000506063 SYNGR3O43761 229 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 SCO2O43819 266 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 CYTIPO60759 359 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 GUCA1CO95843 209 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 CELA3BP08861 270 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 PABPC4LP0CB38 370 aaKnown RBP2.79□□□□□ -1.96
TCOF1-208ENST00000506063 SLC35E2BP0CK96 405 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 CD28P10747 220 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 CDH2P19022 906 aaPredicted RBP2.79□□□□□ -1.96
TCOF1-208ENST00000506063 CD33P20138 364 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 ZNF10P21506 573 aaPredicted RBP2.79□□□□□ -1.96
TCOF1-208ENST00000506063 DRD5P21918 477 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 HIST1H1TP22492 207 aaPredicted RBP2.79□□□□□ -1.96
TCOF1-208ENST00000506063 CPN2P22792 545 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 CXCR5P32302 372 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 EVI2BP34910 448 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 FEN1P39748 380 aaKnown RBP2.79□□□□□ -1.96
TCOF1-208ENST00000506063 PAFAH1B1P43034 410 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 ALDH3B1P43353 468 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 MAGEB1P43366 347 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 PPICP45877 212 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms