RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 GSTK1Q9Y2Q3 226 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 OARD1Q9Y530 152 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 ARHGAP23Q9P227 1491 aa2.77□□□□□ -1.97
TOPBP1-204ENST00000505804 IGHV7-81A0A0B4J1V7 117 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 K7EPI3 171 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 SULT2B1O00204 365 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 CTAGE5O15320 804 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 OR1F1O43749 312 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 FUT3P21217 361 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 CALB2P22676 271 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 PSMA2P25787 234 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 HTR2AP28223 471 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 NTSP30990 170 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 MDH1P40925 334 aaKnown RBP2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 RIPK4P57078 832 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 POLR2FP61218 127 aaKnown RBP2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 EWSR1Q01844 656 aaKnown RBP eCLIP2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 RIPPLY1Q0D2K3 151 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 EGFEM1PQ0D2K5 195 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 CUL1Q13616 776 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 SLC5A12Q1EHB4 618 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 USH1GQ495M9 461 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 CFAP221Q4G0U5 840 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 FAHD2BQ6P2I3 314 aaPredicted RBP2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 FAM199XQ6PEV8 388 aaPredicted RBP2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 LCA5Q86VQ0 697 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 ZNF100Q8IYN0 542 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 SETD7Q8WTS6 366 aaKnown RBP2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 TAF4BQ92750 862 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 FAHD2AQ96GK7 314 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 CYYR1Q96J86 154 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 IMMP1LQ96LU5 166 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 SLC6A7Q99884 636 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 THUMPD2Q9BTF0 503 aaKnown RBP2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 RNF126Q9BV68 326 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 ASB8Q9H765 288 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 LIN28AQ9H9Z2 209 aaKnown RBP2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 MARCH5Q9NX47 278 aa2.76□□□□□ -1.97
TOPBP1-204ENST00000505804 THSD7BQ9C0I4 1608 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 IGHV1OR15-1A0A075B7D0 117 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 PP2D1A8MPX8 630 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 TMEM110-MUSTN1A8MSY1 372 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 K7N7A8 449 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 MAPK13O15264 365 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 ZNF264O43296 627 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 SMPD2O60906 423 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 NEBLO76041 1014 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 CA1P00915 261 aaPredicted RBP2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 IGLV1-47P01700 117 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 KRT6AP02538 564 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 KRT6BP04259 564 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 GCFC2P16383 781 aaKnown RBP2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 TPSB2P20231 275 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 AQP1P29972 269 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 KRT6CP48668 564 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 RAB40BQ12829 278 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 ORC2Q13416 577 aaPredicted RBP2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 TPSAB1Q15661 275 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 IL17AQ16552 155 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 CCDC57Q2TAC2 916 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 HSP90AA5PQ58FG0 334 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 NCR3LG1Q68D85 454 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 KIAA1328Q86T90 577 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 TMEM110Q86TL2 294 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 ALLCQ8N6M5 410 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 C15orf54Q8N8G6 183 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 FADS6Q8N9I5 356 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 DENND6BQ8NEG7 585 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 SMIM14Q96QK8 99 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 MCHR1Q99705 422 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 TXN2Q99757 166 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 GPA33Q99795 319 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 SRXN1Q9BYN0 137 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 OR51J1Q9H342 316 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 GLIPR2Q9H4G4 154 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 MEAF6Q9HAF1 191 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 HPF1Q9NWY4 346 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 CD274Q9NZQ7 290 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 RPS6KB2Q9UBS0 482 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 SCML2Q9UQR0 700 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 PLLPQ9Y342 182 aa2.75□□□□□ -1.97
TOPBP1-204ENST00000505804 FRMPD4Q14CM0 1322 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 A0A1B0GWB2 263 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 WI2-2373I1.2A0A1W2PRP0 233 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 GSAPA4D1B5 854 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 PANO1I0J062 215 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 KIF2AO00139 706 aaPredicted RBP2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 MMP23AO75900 390 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 TM7SF2O76062 418 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 UFL1O94874 794 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 IGHV3-48P01763 117 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 ASNSP08243 561 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 TBXA2RP21731 343 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 GABRR1P24046 479 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 HOXD10P28358 340 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 HPDP32754 393 aaPredicted RBP2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 BTDP43251 543 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 ACADVLP49748 655 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 CAV2P51636 162 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 PLA2G16P53816 162 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms