RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 TRAV27A0A087WT01 109 aa9.06□□□□□ -0.96
CSF1R-203ENST00000504875 A0A0J9YY10 115 aa9.06□□□□□ -0.96
CSF1R-203ENST00000504875 C2orf92A0A1B0GVN3 265 aa9.06□□□□□ -0.96
CSF1R-203ENST00000504875 GXYLT2A0PJZ3 443 aa9.06□□□□□ -0.96
CSF1R-203ENST00000504875 ZC3H12DA2A288 527 aaKnown RBP9.06□□□□□ -0.96
CSF1R-203ENST00000504875 TRAPPC13A5PLN9 417 aa9.06□□□□□ -0.96
CSF1R-203ENST00000504875 RIIAD1A6NNX1 92 aa9.06□□□□□ -0.96
CSF1R-203ENST00000504875 GPR75O95800 540 aa9.06□□□□□ -0.96
CSF1R-203ENST00000504875 ACP2P11117 423 aa9.06□□□□□ -0.96
CSF1R-203ENST00000504875 TSFMP43897 325 aaKnown RBP9.06□□□□□ -0.96
CSF1R-203ENST00000504875 MAZP56270 477 aaKnown RBP9.06□□□□□ -0.96
CSF1R-203ENST00000504875 SNRPNP63162 240 aaKnown RBP9.06□□□□□ -0.96
CSF1R-203ENST00000504875 MAT1AQ00266 395 aaKnown RBP9.06□□□□□ -0.96
CSF1R-203ENST00000504875 AGERQ15109 404 aa9.06□□□□□ -0.96
CSF1R-203ENST00000504875 OCLNQ16625 522 aa9.06□□□□□ -0.96
CSF1R-203ENST00000504875 DDI2Q5TDH0 399 aa9.06□□□□□ -0.96
CSF1R-203ENST00000504875 POMZP3Q6PJE2 187 aa9.06□□□□□ -0.96
CSF1R-203ENST00000504875 FRRS1Q6ZNA5 592 aa9.06□□□□□ -0.96
CSF1R-203ENST00000504875 ZNF619Q8N2I2 560 aa9.06□□□□□ -0.96
CSF1R-203ENST00000504875 AVL9Q8NBF6 648 aa9.06□□□□□ -0.96
CSF1R-203ENST00000504875 GALNT11Q8NCW6 608 aa9.06□□□□□ -0.96
CSF1R-203ENST00000504875 IL17RDQ8NFM7 739 aa9.06□□□□□ -0.96
CSF1R-203ENST00000504875 OR52R1Q8NGF1 315 aa9.06□□□□□ -0.96
CSF1R-203ENST00000504875 APOBEC4Q8WW27 367 aaKnown RBP9.06□□□□□ -0.96
CSF1R-203ENST00000504875 DNAJA3Q96EY1 480 aa9.06□□□□□ -0.96
CSF1R-203ENST00000504875 PTCHD1Q96NR3 888 aa9.06□□□□□ -0.96
CSF1R-203ENST00000504875 OR52D1Q9H346 318 aa9.06□□□□□ -0.96
CSF1R-203ENST00000504875 TXNL4BQ9NX01 149 aaKnown RBP9.06□□□□□ -0.96
CSF1R-203ENST00000504875 CES1P1Q9UKY3 287 aa9.06□□□□□ -0.96
CSF1R-203ENST00000504875 EXOSC1Q9Y3B2 195 aaKnown RBP9.06□□□□□ -0.96
CSF1R-203ENST00000504875 CMAHPQ9Y471 501 aa9.06□□□□□ -0.96
CSF1R-203ENST00000504875 CENPVL1A0A0U1RR11 272 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 A0A1W2PQL4 384 aaPredicted RBP9.05□□□□□ -0.96
CSF1R-203ENST00000504875 SLC9B1P1A6NJY1 282 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 AKR7A2O43488 359 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 AKAP8O43823 692 aaKnown RBP9.05□□□□□ -0.96
CSF1R-203ENST00000504875 GYPBP06028 91 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 DBIP07108 87 aaKnown RBP9.05□□□□□ -0.96
CSF1R-203ENST00000504875 PIPP12273 146 aaPredicted RBP9.05□□□□□ -0.96
CSF1R-203ENST00000504875 PRKAR1BP31321 381 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 STAT5AP42229 794 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 IL18Q14116 193 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 DSG2Q14126 1118 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 OR1Q1Q15612 314 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 PGGHGQ32M88 737 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 Q6ZS52 159 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 RASSF6Q6ZTQ3 369 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 SHISA5Q8N114 240 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 CDRT4Q8N9R6 151 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 MORN4Q8NDC4 146 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 OR51L1Q8NGJ5 315 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 PFN4Q8NHR9 129 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 ENKURQ8TC29 256 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 LMX1AQ8TE12 382 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 ZDHHC1Q8WTX9 485 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 TMEM239Q8WW34 195 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 MMABQ96EY8 250 aaPredicted RBP9.05□□□□□ -0.96
CSF1R-203ENST00000504875 ZNF681Q96N22 645 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 SIGLEC11Q96RL6 698 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 DIMT1Q9UNQ2 313 aaKnown RBP9.05□□□□□ -0.96
CSF1R-203ENST00000504875 PRR23D1E9PI22 279 aaPredicted RBP9.05□□□□□ -0.96
CSF1R-203ENST00000504875 CHST10O43529 356 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 PRICKLE3O43900 615 aaPredicted RBP9.05□□□□□ -0.96
CSF1R-203ENST00000504875 PRKNO60260 465 aaPredicted RBP9.05□□□□□ -0.96
CSF1R-203ENST00000504875 OR2B3O76000 313 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 PRR23D2P0DMB1 279 aaPredicted RBP9.05□□□□□ -0.96
CSF1R-203ENST00000504875 GABRG2P18507 467 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 SOX18P35713 384 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 RABIFP47224 123 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 MRPS21P82921 87 aaKnown RBP9.05□□□□□ -0.96
CSF1R-203ENST00000504875 SLC3A1Q07837 685 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 RAB40BQ12829 278 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 PRPF38BQ5VTL8 546 aaKnown RBP9.05□□□□□ -0.96
CSF1R-203ENST00000504875 ZNF57Q68EA5 555 aaPredicted RBP9.05□□□□□ -0.96
CSF1R-203ENST00000504875 RNF44Q7L0R7 432 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 VWA5B2Q8N398 1253 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 ATP6V1C2Q8NEY4 427 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 TSTD1Q8NFU3 115 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 SPRYD4Q8WW59 207 aaPredicted RBP9.05□□□□□ -0.96
CSF1R-203ENST00000504875 AP3S1Q92572 193 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 GFM1Q96RP9 751 aaKnown RBP9.05□□□□□ -0.96
CSF1R-203ENST00000504875 HDHD2Q9H0R4 259 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 SLC25A19Q9HC21 320 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 TMEM74BQ9NUR3 256 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 KCMF1Q9P0J7 381 aa9.05□□□□□ -0.96
CSF1R-203ENST00000504875 PRAMEF26H0Y7S4 382 aa9.04□□□□□ -0.96
CSF1R-203ENST00000504875 CLDN4O14493 209 aa9.04□□□□□ -0.96
CSF1R-203ENST00000504875 HYAL3O43820 417 aaPredicted RBP9.04□□□□□ -0.96
CSF1R-203ENST00000504875 SDC3O75056 442 aa9.04□□□□□ -0.96
CSF1R-203ENST00000504875 OR5F1O95221 314 aa9.04□□□□□ -0.96
CSF1R-203ENST00000504875 EPPINO95925 133 aa9.04□□□□□ -0.96
CSF1R-203ENST00000504875 ST6GAL1P15907 406 aa9.04□□□□□ -0.96
CSF1R-203ENST00000504875 ACVR2AP27037 513 aa9.04□□□□□ -0.96
CSF1R-203ENST00000504875 SKP1P63208 163 aa9.04□□□□□ -0.96
CSF1R-203ENST00000504875 IRF3Q14653 427 aa9.04□□□□□ -0.96
CSF1R-203ENST00000504875 UBXN2BQ14CS0 331 aa9.04□□□□□ -0.96
CSF1R-203ENST00000504875 GLRX5Q86SX6 157 aa9.04□□□□□ -0.96
CSF1R-203ENST00000504875 OAFQ86UD1 273 aa9.04□□□□□ -0.96
CSF1R-203ENST00000504875 OR13C2Q8NGS9 318 aa9.04□□□□□ -0.96
CSF1R-203ENST00000504875 NEIL3Q8TAT5 605 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms