RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 POMPQ9Y244 141 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 AP3M1Q9Y2T2 418 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 C15orf41Q9Y2V0 281 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 KLF13Q9Y2Y9 288 aaPredicted RBP4.49□□□□□ -1.69
LMNB1-208ENST00000504788 MRPS18CQ9Y3D5 142 aaKnown RBP4.49□□□□□ -1.69
LMNB1-208ENST00000504788 SNX13Q9Y5W8 968 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 LIPGQ9Y5X9 500 aa4.49□□□□□ -1.69
LMNB1-208ENST00000504788 USP9XQ93008 2570 aaPredicted RBP4.48□□□□□ -1.69
LMNB1-208ENST00000504788 DOCK7Q96N67 2140 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 A0A1B0GVC2 190 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 SYT5O00445 386 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 FFAR1O14842 300 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 ZNF264O43296 627 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 WIPF1O43516 503 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 FRS3O43559 492 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 SCO2O43819 266 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 SLC28A2O43868 658 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 NPIPB7O75200 414 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 DNAJC8O75937 253 aaPredicted RBP4.48□□□□□ -1.69
LMNB1-208ENST00000504788 ATP5HO75947 161 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 PDE5AO76074 875 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 PRB1P04280 392 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 FESP07332 822 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 CD46P15529 392 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 PRKCAP17252 672 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 IL11P20809 199 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 ELAVL4P26378 380 aaKnown RBP4.48□□□□□ -1.69
LMNB1-208ENST00000504788 RFC3P40938 356 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 MAGEA2P43356 314 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 RFX3P48380 749 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 P2RX1P51575 399 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 KCNJ2P63252 427 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 SELENOWP63302 87 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 KLRB1Q12918 225 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 EPS8Q12929 822 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 ELOAQ14241 798 aaKnown RBP4.48□□□□□ -1.69
LMNB1-208ENST00000504788 TUSC1Q2TAM9 212 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 CTU2Q2VPK5 515 aaKnown RBP4.48□□□□□ -1.69
LMNB1-208ENST00000504788 PLPPR5Q32ZL2 321 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 NHSL2Q5HYW2 709 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 EMC4Q5J8M3 183 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 DCST1Q5T197 706 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 ATAD3BQ5T9A4 648 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 IRAK1BP1Q5VVH5 260 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 GLYATQ6IB77 296 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 C16orf89Q6UX73 402 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 WDR88Q6ZMY6 472 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 VTCN1Q7Z7D3 282 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 ADGRE4PQ86SQ3 457 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 ZNF605Q86T29 641 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 PATL1Q86TB9 770 aaKnown RBP4.48□□□□□ -1.69
LMNB1-208ENST00000504788 IFNEQ86WN2 208 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 ULK2Q8IYT8 1036 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 ZNF843Q8N446 348 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 GATSQ8NAP1 163 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 TMEM178AQ8NBL3 297 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 TOR1AIP2Q8NFQ8 470 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 OR6T1Q8NGN1 323 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 OR10Q1Q8NGQ4 319 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 WDR60Q8WVS4 1066 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 FAR1Q8WVX9 515 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 TM9SF4Q92544 642 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 NR4A3Q92570 626 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 SLCO4A1Q96BD0 722 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 C1GALT1C1Q96EU7 318 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 PRSS27Q9BQR3 290 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 FUZQ9BT04 418 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 THTPAQ9BU02 230 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 PRR14Q9BWN1 585 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 PINK1Q9BXM7 581 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 LAT2Q9GZY6 243 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 MAN2C1Q9NTJ4 1040 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 ASF1BQ9NVP2 202 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 NDE1Q9NXR1 346 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 QPCTLQ9NXS2 382 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 ABI3Q9P2A4 366 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 MRTO4Q9UKD2 239 aaKnown RBP4.48□□□□□ -1.69
LMNB1-208ENST00000504788 CARD8Q9Y2G2 431 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 IFT52Q9Y366 437 aa4.48□□□□□ -1.69
LMNB1-208ENST00000504788 HELZ2Q9BYK8 2649 aaKnown RBP4.48□□□□□ -1.69
LMNB1-208ENST00000504788 TCRBV3S1A0A5B6 114 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 ANKUB1A6NFN9 424 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 KLRC4-KLRK1H3BQV0 150 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 EBAG9O00559 213 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 GNB5O14775 395 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 GYG2O15488 501 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 ZNHIT1O43257 154 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 NDUFB5O43674 189 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 HS6ST1O60243 411 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 EIF4E2O60573 245 aaKnown RBP4.47□□□□□ -1.69
LMNB1-208ENST00000504788 CBR3O75828 277 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 P04436 131 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 UBTFL6P0CB48 400 aaPredicted RBP4.47□□□□□ -1.69
LMNB1-208ENST00000504788 GKN3PP0CG01 181 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 UBL4AP11441 157 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 SFTPCP11686 197 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 IL7RP16871 459 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 TCN1P20061 433 aaPredicted RBP4.47□□□□□ -1.69
LMNB1-208ENST00000504788 TNFRSF1BP20333 461 aa4.47□□□□□ -1.69
LMNB1-208ENST00000504788 ATP6V1C1P21283 382 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms