RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 CARD18P57730 90 aa17.4■□□□□ 0.38
UBE2D3-215ENST00000503418 FOXD4Q12950 439 aaPredicted RBP17.4■□□□□ 0.38
UBE2D3-215ENST00000503418 C6orf120Q7Z4R8 191 aa17.4■□□□□ 0.38
UBE2D3-215ENST00000503418 FBXO27Q8NI29 283 aa17.4■□□□□ 0.38
UBE2D3-215ENST00000503418 SDF2Q99470 211 aa17.4■□□□□ 0.38
UBE2D3-215ENST00000503418 SORT1Q99523 831 aa17.4■□□□□ 0.38
UBE2D3-215ENST00000503418 PAIP2Q9BPZ3 127 aaKnown RBP17.4■□□□□ 0.38
UBE2D3-215ENST00000503418 SERHL2Q9H4I8 314 aa17.4■□□□□ 0.38
UBE2D3-215ENST00000503418 ICAM5Q9UMF0 924 aa17.4■□□□□ 0.38
UBE2D3-215ENST00000503418 PCDHGB4Q9UN71 923 aa17.4■□□□□ 0.38
UBE2D3-215ENST00000503418 MAP1AP78559 2803 aaPredicted RBP17.4■□□□□ 0.38
UBE2D3-215ENST00000503418 HEATR5AQ86XA9 2040 aa17.39■□□□□ 0.37
UBE2D3-215ENST00000503418 RNASET2O00584 256 aaKnown RBP17.39■□□□□ 0.37
UBE2D3-215ENST00000503418 ZNF500O60304 480 aaPredicted RBP17.39■□□□□ 0.37
UBE2D3-215ENST00000503418 CD53P19397 219 aa17.39■□□□□ 0.37
UBE2D3-215ENST00000503418 ELK4P28324 431 aa17.39■□□□□ 0.37
UBE2D3-215ENST00000503418 CCR4P51679 360 aa17.39■□□□□ 0.37
UBE2D3-215ENST00000503418 CASP9P55211 416 aa17.39■□□□□ 0.37
UBE2D3-215ENST00000503418 ADAM8P78325 824 aa17.39■□□□□ 0.37
UBE2D3-215ENST00000503418 STX3Q13277 289 aa17.39■□□□□ 0.37
UBE2D3-215ENST00000503418 GPR68Q15743 365 aa17.39■□□□□ 0.37
UBE2D3-215ENST00000503418 TOMM34Q15785 309 aaPredicted RBP17.39■□□□□ 0.37
UBE2D3-215ENST00000503418 PDZK1Q5T2W1 519 aa17.39■□□□□ 0.37
UBE2D3-215ENST00000503418 ANKRD46Q86W74 232 aa17.39■□□□□ 0.37
UBE2D3-215ENST00000503418 ATP6V1C2Q8NEY4 427 aa17.39■□□□□ 0.37
UBE2D3-215ENST00000503418 ROBO4Q8WZ75 1007 aa17.39■□□□□ 0.37
UBE2D3-215ENST00000503418 REXO5Q96IC2 774 aaKnown RBP17.39■□□□□ 0.37
UBE2D3-215ENST00000503418 NUF2Q9BZD4 464 aa17.39■□□□□ 0.37
UBE2D3-215ENST00000503418 C12orf49Q9H741 205 aa17.39■□□□□ 0.37
UBE2D3-215ENST00000503418 PLSCR4Q9NRQ2 329 aa17.39■□□□□ 0.37
UBE2D3-215ENST00000503418 GLRX2Q9NS18 164 aa17.39■□□□□ 0.37
UBE2D3-215ENST00000503418 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.39■□□□□ 0.37
UBE2D3-215ENST00000503418 GPC6Q9Y625 555 aaPredicted RBP17.39■□□□□ 0.37
UBE2D3-215ENST00000503418 DUXAA6NLW8 204 aa17.38■□□□□ 0.37
UBE2D3-215ENST00000503418 NPIPB9F8W1W9 429 aa17.38■□□□□ 0.37
UBE2D3-215ENST00000503418 ZNF195O14628 629 aa17.38■□□□□ 0.37
UBE2D3-215ENST00000503418 CYP7B1O75881 506 aa17.38■□□□□ 0.37
UBE2D3-215ENST00000503418 SNUPNO95149 360 aaKnown RBP17.38■□□□□ 0.37
UBE2D3-215ENST00000503418 CPSF4O95639 269 aaKnown RBP17.38■□□□□ 0.37
UBE2D3-215ENST00000503418 AK1P00568 194 aa17.38■□□□□ 0.37
UBE2D3-215ENST00000503418 UBL4AP11441 157 aa17.38■□□□□ 0.37
UBE2D3-215ENST00000503418 ADH6P28332 368 aa17.38■□□□□ 0.37
UBE2D3-215ENST00000503418 MPP2Q14168 576 aa17.38■□□□□ 0.37
UBE2D3-215ENST00000503418 ZNF239Q16600 458 aaKnown RBP17.38■□□□□ 0.37
UBE2D3-215ENST00000503418 GTF2IRD2BQ6EKJ0 949 aa17.38■□□□□ 0.37
UBE2D3-215ENST00000503418 OLIG3Q7RTU3 272 aa17.38■□□□□ 0.37
UBE2D3-215ENST00000503418 C16orf62Q7Z3J2 963 aa17.38■□□□□ 0.37
UBE2D3-215ENST00000503418 GTF2IRD2Q86UP8 949 aa17.38■□□□□ 0.37
UBE2D3-215ENST00000503418 KIRREL3Q8IZU9 778 aa17.38■□□□□ 0.37
UBE2D3-215ENST00000503418 OR8J2Q8NGG1 315 aa17.38■□□□□ 0.37
UBE2D3-215ENST00000503418 GPR119Q8TDV5 335 aa17.38■□□□□ 0.37
UBE2D3-215ENST00000503418 CPNE4Q96A23 557 aaPredicted RBP17.38■□□□□ 0.37
UBE2D3-215ENST00000503418 OR51I1Q9H343 314 aa17.38■□□□□ 0.37
UBE2D3-215ENST00000503418 UBTD1Q9HAC8 227 aa17.38■□□□□ 0.37
UBE2D3-215ENST00000503418 TIGARQ9NQ88 270 aa17.38■□□□□ 0.37
UBE2D3-215ENST00000503418 RAB21Q9UL25 225 aa17.38■□□□□ 0.37
UBE2D3-215ENST00000503418 ACTL7BQ9Y614 415 aa17.38■□□□□ 0.37
UBE2D3-215ENST00000503418 VPS13CQ709C8 3753 aa17.38■□□□□ 0.37
UBE2D3-215ENST00000503418 GJE1A6NN92 205 aa17.37■□□□□ 0.37
UBE2D3-215ENST00000503418 ZNF264O43296 627 aa17.37■□□□□ 0.37
UBE2D3-215ENST00000503418 EFNA2O43921 213 aa17.37■□□□□ 0.37
UBE2D3-215ENST00000503418 STX11O75558 287 aa17.37■□□□□ 0.37
UBE2D3-215ENST00000503418 TUBBP07437 444 aa17.37■□□□□ 0.37
UBE2D3-215ENST00000503418 PRKCAP17252 672 aa17.37■□□□□ 0.37
UBE2D3-215ENST00000503418 LBPP18428 481 aa17.37■□□□□ 0.37
UBE2D3-215ENST00000503418 AGTR1P30556 359 aa17.37■□□□□ 0.37
UBE2D3-215ENST00000503418 CBFBQ13951 182 aa17.37■□□□□ 0.37
UBE2D3-215ENST00000503418 TMEM176BQ3YBM2 270 aaPredicted RBP17.37■□□□□ 0.37
UBE2D3-215ENST00000503418 C22orf34Q6ZV56 151 aa17.37■□□□□ 0.37
UBE2D3-215ENST00000503418 STK32CQ86UX6 486 aa17.37■□□□□ 0.37
UBE2D3-215ENST00000503418 ANKRD42Q8N9B4 389 aa17.37■□□□□ 0.37
UBE2D3-215ENST00000503418 VPS37AQ8NEZ2 397 aa17.37■□□□□ 0.37
UBE2D3-215ENST00000503418 TOR1AIP2Q8NFQ8 470 aa17.37■□□□□ 0.37
UBE2D3-215ENST00000503418 OR5W2Q8NH69 310 aa17.37■□□□□ 0.37
UBE2D3-215ENST00000503418 ABHD3Q8WU67 409 aa17.37■□□□□ 0.37
UBE2D3-215ENST00000503418 SRXN1Q9BYN0 137 aa17.37■□□□□ 0.37
UBE2D3-215ENST00000503418 NMUR2Q9GZQ4 415 aa17.37■□□□□ 0.37
UBE2D3-215ENST00000503418 FANCFQ9NPI8 374 aa17.37■□□□□ 0.37
UBE2D3-215ENST00000503418 EXD2Q9NVH0 621 aa17.37■□□□□ 0.37
UBE2D3-215ENST00000503418 PNPOQ9NVS9 261 aa17.37■□□□□ 0.37
UBE2D3-215ENST00000503418 BEX4Q9NWD9 120 aaPredicted RBP17.37■□□□□ 0.37
UBE2D3-215ENST00000503418 MKLN1Q9UL63 735 aa17.37■□□□□ 0.37
UBE2D3-215ENST00000503418 ZFHX3Q15911 3703 aa17.36■□□□□ 0.37
UBE2D3-215ENST00000503418 MTORP42345 2549 aa17.36■□□□□ 0.37
UBE2D3-215ENST00000503418 SERINC4A6NH21 518 aa17.36■□□□□ 0.37
UBE2D3-215ENST00000503418 EIF4E2O60573 245 aaKnown RBP17.36■□□□□ 0.37
UBE2D3-215ENST00000503418 FCMRO60667 390 aa17.36■□□□□ 0.37
UBE2D3-215ENST00000503418 PABPC4LP0CB38 370 aaKnown RBP17.36■□□□□ 0.37
UBE2D3-215ENST00000503418 BST1Q10588 318 aa17.36■□□□□ 0.37
UBE2D3-215ENST00000503418 QPRTQ15274 297 aa17.36■□□□□ 0.37
UBE2D3-215ENST00000503418 ARHGAP11BQ3KRB8 267 aa17.36■□□□□ 0.37
UBE2D3-215ENST00000503418 TNFAIP8L3Q5GJ75 292 aa17.36■□□□□ 0.37
UBE2D3-215ENST00000503418 SPANXN4Q5MJ08 99 aa17.36■□□□□ 0.37
UBE2D3-215ENST00000503418 ANXA8L1Q5VT79 327 aa17.36■□□□□ 0.37
UBE2D3-215ENST00000503418 HHATQ5VTY9 493 aa17.36■□□□□ 0.37
UBE2D3-215ENST00000503418 TNFAIP8L2Q6P589 184 aaPredicted RBP17.36■□□□□ 0.37
UBE2D3-215ENST00000503418 STAC2Q6ZMT1 411 aa17.36■□□□□ 0.37
UBE2D3-215ENST00000503418 BEND4Q6ZU67 534 aa17.36■□□□□ 0.37
UBE2D3-215ENST00000503418 WFDC11Q8NEX6 87 aa17.36■□□□□ 0.37
UBE2D3-215ENST00000503418 RNF128Q8TEB7 428 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms