RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 EXOSC7Q15024 291 aaKnown RBP10.74□□□□□ -0.69
USP46-204ENST00000503060 LARS2Q15031 903 aaKnown RBP10.74□□□□□ -0.69
USP46-204ENST00000503060 TIGD6Q17RP2 521 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 DCST2Q5T1A1 773 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 COL13A1Q5TAT6 717 aaPredicted RBP10.74□□□□□ -0.69
USP46-204ENST00000503060 DEGS2Q6QHC5 323 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 IQCF1Q8N6M8 205 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 COX18Q8N8Q8 333 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 GNPDA2Q8TDQ7 276 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 Q96MT0 163 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 ATP6V0BQ99437 205 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 STACQ99469 402 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 MCHR1Q99705 422 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 MAP3K3Q99759 626 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 DUSP22Q9NRW4 184 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 DDX28Q9NUL7 540 aaKnown RBP10.74□□□□□ -0.69
USP46-204ENST00000503060 NTNG1Q9Y2I2 539 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 SCN2AQ99250 2005 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 ANKRD34BA5PLL1 514 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 AGAP5A6NIR3 686 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 CLDN24A6NM45 220 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 ZNF879B4DU55 563 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 SRPX2O60687 465 aaPredicted RBP10.74□□□□□ -0.69
USP46-204ENST00000503060 SCAF4O95104 1147 aaKnown RBP10.74□□□□□ -0.69
USP46-204ENST00000503060 PTHP01270 115 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 THBS1P07996 1170 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 SLC35E2P0CK97 266 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 ADORA3P0DMS8 318 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 PIPP12273 146 aaPredicted RBP10.74□□□□□ -0.69
USP46-204ENST00000503060 IFNGR2P38484 337 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 LIPAP38571 399 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 ACAA2P42765 397 aaKnown RBP10.74□□□□□ -0.69
USP46-204ENST00000503060 MLLT10P55197 1068 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 STARD6P59095 220 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 DUSP8Q13202 625 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 SYT16Q17RD7 645 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 PTCRAQ6ISU1 281 aaPredicted RBP10.74□□□□□ -0.69
USP46-204ENST00000503060 SLC25A24Q6NUK1 477 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 OR8J1Q8NGP2 316 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 C9orf43Q8TAL5 461 aaPredicted RBP10.74□□□□□ -0.69
USP46-204ENST00000503060 PIK3R3Q92569 461 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 HLA-CQ95604 372 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 CTHRC1Q96CG8 243 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 TCTN2Q96GX1 697 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 SLC38A3Q99624 504 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 CDCA4Q9BXL8 241 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 MIR1-1HGQ9H1L0 117 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 UCKL1Q9NWZ5 548 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 DNAJC27Q9NZQ0 273 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 GRHPRQ9UBQ7 328 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 A0A0A6YYC8 382 aaPredicted RBP10.73□□□□□ -0.69
USP46-204ENST00000503060 CENPVL1A0A0U1RR11 272 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 I3L1I5 382 aaPredicted RBP10.73□□□□□ -0.69
USP46-204ENST00000503060 SHOXO15266 292 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 STX11O75558 287 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 CBR3O75828 277 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 MED26O95402 600 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 ADRA2AP08913 450 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 RPS4Y1P22090 263 aaKnown RBP10.73□□□□□ -0.69
USP46-204ENST00000503060 MAP3K8P41279 467 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 ATP12AP54707 1039 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 RPL6Q02878 288 aaKnown RBP10.73□□□□□ -0.69
USP46-204ENST00000503060 GINS1Q14691 196 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 GPR68Q15743 365 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 TUSC1Q2TAM9 212 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 EIPR1Q53HC9 387 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 ZNF730Q6ZMV8 503 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 PRICKLE2Q7Z3G6 844 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 C17orf82Q86X59 251 aaPredicted RBP10.73□□□□□ -0.69
USP46-204ENST00000503060 MEX3DQ86XN8 651 aaKnown RBP10.73□□□□□ -0.69
USP46-204ENST00000503060 KIF18BQ86Y91 864 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 TCEANCQ8N8B7 351 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 NDNFQ8TB73 568 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 SHDQ96IW2 340 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 OPALINQ96PE5 141 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 SAP130Q9H0E3 1048 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 TVP23BQ9NYZ1 205 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 HCN3Q9P1Z3 774 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 TMEM131Q92545 1883 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 KNL1Q8NG31 2342 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 M0R3G1 203 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 OR10H2O60403 315 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 CNOT3O75175 753 aaKnown RBP10.73□□□□□ -0.69
USP46-204ENST00000503060 NTN1O95631 604 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 CBX7O95931 251 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 AK1P00568 194 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 DBIP07108 87 aaKnown RBP10.73□□□□□ -0.69
USP46-204ENST00000503060 GIPRP48546 466 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 NCS1P62166 190 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 CDK5Q00535 292 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 TSPAN31Q12999 210 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 ZMYND11Q15326 602 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 MAPK14Q16539 360 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 PLAG1Q6DJT9 500 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 DGAT2L6Q6ZPD8 337 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 GDF7Q7Z4P5 450 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 CROCCP3Q8IVE0 287 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 CCDC36Q8IYA8 594 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 PIGXQ8TBF5 258 aa10.73□□□□□ -0.69
USP46-204ENST00000503060 GPR151Q8TDV0 419 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms