RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 THBS1P07996 1170 aa22.73■■□□□ 1.23
LSM6-202ENST00000502781 IL7RP16871 459 aa22.73■■□□□ 1.23
LSM6-202ENST00000502781 PSMA4P25789 261 aaKnown RBP22.73■■□□□ 1.23
LSM6-202ENST00000502781 GCKP35557 465 aa22.73■■□□□ 1.23
LSM6-202ENST00000502781 SCARB2Q14108 478 aa22.73■■□□□ 1.23
LSM6-202ENST00000502781 CYP51A1Q16850 503 aa22.73■■□□□ 1.23
LSM6-202ENST00000502781 AAGABQ6PD74 315 aa22.73■■□□□ 1.23
LSM6-202ENST00000502781 CALHM3Q86XJ0 350 aa22.73■■□□□ 1.23
LSM6-202ENST00000502781 GTPBP8Q8N3Z3 284 aaPredicted RBP22.73■■□□□ 1.23
LSM6-202ENST00000502781 C11orf65Q8NCR3 313 aa22.73■■□□□ 1.23
LSM6-202ENST00000502781 ZBTB8AQ96BR9 441 aa22.73■■□□□ 1.23
LSM6-202ENST00000502781 WDYHV1Q96HA8 205 aa22.73■■□□□ 1.23
LSM6-202ENST00000502781 PIGQQ9BRB3 760 aa22.73■■□□□ 1.23
LSM6-202ENST00000502781 TP63Q9H3D4 680 aaPredicted RBP22.73■■□□□ 1.23
LSM6-202ENST00000502781 VDAC3Q9Y277 283 aa22.73■■□□□ 1.23
LSM6-202ENST00000502781 TENM4Q6N022 2769 aa22.73■■□□□ 1.23
LSM6-202ENST00000502781 LRRK2Q5S007 2527 aa22.72■■□□□ 1.23
LSM6-202ENST00000502781 CPN1P15169 458 aa22.72■■□□□ 1.23
LSM6-202ENST00000502781 ZNF17P17021 662 aa22.72■■□□□ 1.23
LSM6-202ENST00000502781 LHX2P50458 406 aa22.72■■□□□ 1.23
LSM6-202ENST00000502781 ZNF41P51814 821 aaPredicted RBP22.72■■□□□ 1.23
LSM6-202ENST00000502781 PCBP3P57721 371 aaKnown RBP22.72■■□□□ 1.23
LSM6-202ENST00000502781 LIN52Q52LA3 116 aa22.72■■□□□ 1.23
LSM6-202ENST00000502781 RNF220Q5VTB9 566 aa22.72■■□□□ 1.23
LSM6-202ENST00000502781 RAET1LQ5VY80 246 aa22.72■■□□□ 1.23
LSM6-202ENST00000502781 VRK2Q86Y07 508 aa22.72■■□□□ 1.23
LSM6-202ENST00000502781 ZZZ3Q8IYH5 903 aa22.72■■□□□ 1.23
LSM6-202ENST00000502781 FAM26EQ8N5C1 309 aa22.72■■□□□ 1.23
LSM6-202ENST00000502781 CCDC197Q8NCU1 140 aa22.72■■□□□ 1.23
LSM6-202ENST00000502781 HIPK4Q8NE63 616 aa22.72■■□□□ 1.23
LSM6-202ENST00000502781 OR5M9Q8NGP3 310 aa22.72■■□□□ 1.23
LSM6-202ENST00000502781 CNOT9Q92600 299 aaKnown RBP22.72■■□□□ 1.23
LSM6-202ENST00000502781 ZNF524Q96C55 264 aa22.72■■□□□ 1.23
LSM6-202ENST00000502781 DMRTA2Q96SC8 542 aa22.72■■□□□ 1.23
LSM6-202ENST00000502781 NPAS1Q99742 590 aa22.72■■□□□ 1.23
LSM6-202ENST00000502781 SPATA9Q9BWV2 254 aa22.72■■□□□ 1.23
LSM6-202ENST00000502781 RSPO3Q9BXY4 272 aaPredicted RBP22.72■■□□□ 1.23
LSM6-202ENST00000502781 DNAJB12Q9NXW2 375 aaKnown RBP22.72■■□□□ 1.23
LSM6-202ENST00000502781 SH3BGRL2Q9UJC5 107 aa22.72■■□□□ 1.23
LSM6-202ENST00000502781 MEMO1Q9Y316 297 aa22.72■■□□□ 1.23
LSM6-202ENST00000502781 IFT52Q9Y366 437 aa22.72■■□□□ 1.23
LSM6-202ENST00000502781 CHST2Q9Y4C5 530 aa22.72■■□□□ 1.23
LSM6-202ENST00000502781 GPC6Q9Y625 555 aaPredicted RBP22.72■■□□□ 1.23
LSM6-202ENST00000502781 E9PLN8 166 aa22.71■■□□□ 1.23
LSM6-202ENST00000502781 WDR1O75083 606 aa22.71■■□□□ 1.23
LSM6-202ENST00000502781 TCEA1P23193 301 aaKnown RBP22.71■■□□□ 1.23
LSM6-202ENST00000502781 EEF1A1P68104 462 aaKnown RBP22.71■■□□□ 1.23
LSM6-202ENST00000502781 TOMM34Q15785 309 aaPredicted RBP22.71■■□□□ 1.23
LSM6-202ENST00000502781 BCL2A1Q16548 175 aa22.71■■□□□ 1.23
LSM6-202ENST00000502781 SLC25A53Q5H9E4 307 aa22.71■■□□□ 1.23
LSM6-202ENST00000502781 MRPL2Q5T653 305 aaKnown RBP22.71■■□□□ 1.23
LSM6-202ENST00000502781 ENPP6Q6UWR7 440 aa22.71■■□□□ 1.23
LSM6-202ENST00000502781 ZNF836Q6ZNA1 936 aa22.71■■□□□ 1.23
LSM6-202ENST00000502781 FJX1Q86VR8 437 aa22.71■■□□□ 1.23
LSM6-202ENST00000502781 POC1BQ8TC44 478 aa22.71■■□□□ 1.23
LSM6-202ENST00000502781 VKORC1Q9BQB6 163 aa22.71■■□□□ 1.23
LSM6-202ENST00000502781 ZNF443Q9Y2A4 671 aaPredicted RBP22.71■■□□□ 1.23
LSM6-202ENST00000502781 ZNF337Q9Y3M9 751 aa22.71■■□□□ 1.23
LSM6-202ENST00000502781 CDHR4A6H8M9 788 aa22.7■■□□□ 1.22
LSM6-202ENST00000502781 WIPF3A6NGB9 483 aa22.7■■□□□ 1.22
LSM6-202ENST00000502781 FIGNL2A6NMB9 653 aa22.7■■□□□ 1.22
LSM6-202ENST00000502781 CCL21O00585 134 aa22.7■■□□□ 1.22
LSM6-202ENST00000502781 ADAM11O75078 769 aa22.7■■□□□ 1.22
LSM6-202ENST00000502781 NTN1O95631 604 aa22.7■■□□□ 1.22
LSM6-202ENST00000502781 PABPC4LP0CB38 370 aaKnown RBP22.7■■□□□ 1.22
LSM6-202ENST00000502781 ZNF708P17019 499 aa22.7■■□□□ 1.22
LSM6-202ENST00000502781 CLDN18P56856 261 aa22.7■■□□□ 1.22
LSM6-202ENST00000502781 CBFBQ13951 182 aa22.7■■□□□ 1.22
LSM6-202ENST00000502781 LARS2Q15031 903 aaKnown RBP22.7■■□□□ 1.22
LSM6-202ENST00000502781 ZSWIM7Q19AV6 140 aa22.7■■□□□ 1.22
LSM6-202ENST00000502781 RTL6Q6ICC9 239 aa22.7■■□□□ 1.22
LSM6-202ENST00000502781 MYO7BQ6PIF6 2116 aa22.7■■□□□ 1.22
LSM6-202ENST00000502781 C3P1Q6ZMU1 363 aa22.7■■□□□ 1.22
LSM6-202ENST00000502781 ARPINQ7Z6K5 226 aa22.7■■□□□ 1.22
LSM6-202ENST00000502781 HEATR5AQ86XA9 2040 aa22.7■■□□□ 1.22
LSM6-202ENST00000502781 GRAMD2AQ8IUY3 354 aa22.7■■□□□ 1.22
LSM6-202ENST00000502781 PM20D2Q8IYS1 436 aa22.7■■□□□ 1.22
LSM6-202ENST00000502781 ULK2Q8IYT8 1036 aa22.7■■□□□ 1.22
LSM6-202ENST00000502781 FITM2Q8N6M3 262 aa22.7■■□□□ 1.22
LSM6-202ENST00000502781 TMCO5AQ8N6Q1 288 aa22.7■■□□□ 1.22
LSM6-202ENST00000502781 OR5M1Q8NGP8 315 aa22.7■■□□□ 1.22
LSM6-202ENST00000502781 ZNF583Q96ND8 569 aa22.7■■□□□ 1.22
LSM6-202ENST00000502781 HOPXQ9BPY8 73 aaPredicted RBP22.7■■□□□ 1.22
LSM6-202ENST00000502781 ECSITQ9BQ95 431 aa22.7■■□□□ 1.22
LSM6-202ENST00000502781 DIDO1Q9BTC0 2240 aaKnown RBP22.69■■□□□ 1.22
LSM6-202ENST00000502781 SHISA8B8ZZ34 492 aa22.69■■□□□ 1.22
LSM6-202ENST00000502781 GCM2O75603 506 aaPredicted RBP22.69■■□□□ 1.22
LSM6-202ENST00000502781 CYP7B1O75881 506 aa22.69■■□□□ 1.22
LSM6-202ENST00000502781 NUDT14O95848 222 aa22.69■■□□□ 1.22
LSM6-202ENST00000502781 HOXD4P09016 255 aaPredicted RBP22.69■■□□□ 1.22
LSM6-202ENST00000502781 GABRA1P14867 456 aa22.69■■□□□ 1.22
LSM6-202ENST00000502781 PRKCAP17252 672 aa22.69■■□□□ 1.22
LSM6-202ENST00000502781 ACVR2AP27037 513 aa22.69■■□□□ 1.22
LSM6-202ENST00000502781 ADH6P28332 368 aa22.69■■□□□ 1.22
LSM6-202ENST00000502781 EIF1P41567 113 aaKnown RBP22.69■■□□□ 1.22
LSM6-202ENST00000502781 STARP49675 285 aa22.69■■□□□ 1.22
LSM6-202ENST00000502781 DLX5P56178 289 aa22.69■■□□□ 1.22
LSM6-202ENST00000502781 VMACQ2NL98 169 aa22.69■■□□□ 1.22
LSM6-202ENST00000502781 SLC30A8Q8IWU4 369 aa22.69■■□□□ 1.22
LSM6-202ENST00000502781 SLC15A3Q8IY34 581 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms