RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 PJVKQ0ZLH3 352 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 RAB40BQ12829 278 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 SLC5A12Q1EHB4 618 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 LRRC36Q1X8D7 754 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 DNAJC21Q5F1R6 531 aaKnown RBP3.4□□□□□ -1.87
VPS36-206ENST00000497149 CROCCQ5TZA2 2017 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 ZNF544Q6NX49 715 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 ARMCX2Q7L311 632 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 KIAA1328Q86T90 577 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 DENND6BQ8NEG7 585 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 RAET1EQ8TD07 263 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 OSTF1Q92882 214 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 FGGYQ96C11 551 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 CYP2S1Q96SQ9 504 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 ZNF184Q99676 751 aaPredicted RBP3.4□□□□□ -1.87
VPS36-206ENST00000497149 CRNKL1Q9BZJ0 848 aaKnown RBP3.4□□□□□ -1.87
VPS36-206ENST00000497149 NMUR2Q9GZQ4 415 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 FANCFQ9NPI8 374 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.4□□□□□ -1.87
VPS36-206ENST00000497149 ONECUT1Q9UBC0 465 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 ABCG2Q9UNQ0 655 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 ZNF256Q9Y2P7 627 aaPredicted RBP3.4□□□□□ -1.87
VPS36-206ENST00000497149 ATP6V0A2Q9Y487 856 aa3.4□□□□□ -1.87
VPS36-206ENST00000497149 A8MUI8 341 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 ZNF705EA8MWA4 302 aaPredicted RBP3.39□□□□□ -1.87
VPS36-206ENST00000497149 ANGPT2O15123 496 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 HDAC3O15379 428 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 ZSCAN12O43309 604 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 TBL1XO60907 577 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 TM7SF2O76062 418 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 IGLL1P15814 213 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 GCKP35557 465 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 STX17P56962 302 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 ELP6Q0PNE2 266 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 ZNF79Q15937 498 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 AANATQ16613 207 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 TATDN3Q17R31 274 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 SLC36A3Q495N2 470 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 DNM1P46Q6ZS02 220 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 ZDHHC21Q8IVQ6 265 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 LRRC43Q8N309 656 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 C14orf178Q8N769 122 aaPredicted RBP3.39□□□□□ -1.87
VPS36-206ENST00000497149 OR10H4Q8NGA5 316 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 PNPT1Q8TCS8 783 aaKnown RBP3.39□□□□□ -1.87
VPS36-206ENST00000497149 PHYHIPLQ96FC7 376 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 C16orf74Q96GX8 76 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 CELF6Q96J87 481 aaKnown RBP3.39□□□□□ -1.87
VPS36-206ENST00000497149 TSGA13Q96PP4 275 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 IL4I1Q96RQ9 567 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 PLSCR3Q9NRY6 295 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 GNG12Q9UBI6 72 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 ZNF221Q9UK13 617 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 ANGPTL2Q9UKU9 493 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 WDR45Q9Y484 360 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 OR10H1Q9Y4A9 318 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 MAB21L2Q9Y586 359 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 FRMPD4Q14CM0 1322 aa3.39□□□□□ -1.87
VPS36-206ENST00000497149 SMIM28A0A1B0GU29 152 aa3.38□□□□□ -1.87
VPS36-206ENST00000497149 NDC80O14777 642 aa3.38□□□□□ -1.87
VPS36-206ENST00000497149 MSH4O15457 936 aa3.38□□□□□ -1.87
VPS36-206ENST00000497149 OR8U8P0C7N1 319 aa3.38□□□□□ -1.87
VPS36-206ENST00000497149 CPN1P15169 458 aa3.38□□□□□ -1.87
VPS36-206ENST00000497149 CA8P35219 290 aa3.38□□□□□ -1.87
VPS36-206ENST00000497149 SOX6P35712 828 aa3.38□□□□□ -1.87
VPS36-206ENST00000497149 SNTB2Q13425 540 aaKnown RBP3.38□□□□□ -1.87
VPS36-206ENST00000497149 KYAT1Q16773 422 aa3.38□□□□□ -1.87
VPS36-206ENST00000497149 NADK2Q4G0N4 442 aa3.38□□□□□ -1.87
VPS36-206ENST00000497149 FAM199XQ6PEV8 388 aaPredicted RBP3.38□□□□□ -1.87
VPS36-206ENST00000497149 C16orf62Q7Z3J2 963 aa3.38□□□□□ -1.87
VPS36-206ENST00000497149 OR2T34Q8NGX1 318 aa3.38□□□□□ -1.87
VPS36-206ENST00000497149 C12orf66Q96MD2 445 aa3.38□□□□□ -1.87
VPS36-206ENST00000497149 MCHR1Q99705 422 aa3.38□□□□□ -1.87
VPS36-206ENST00000497149 CHIAQ9BZP6 476 aa3.38□□□□□ -1.87
VPS36-206ENST00000497149 TMEM117Q9H0C3 514 aa3.38□□□□□ -1.87
VPS36-206ENST00000497149 GLIPR2Q9H4G4 154 aa3.38□□□□□ -1.87
VPS36-206ENST00000497149 AIPL1Q9NZN9 384 aa3.38□□□□□ -1.87
VPS36-206ENST00000497149 A0A1W2PNV4 684 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 TUBAL3A6NHL2 446 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 SULT2B1O00204 365 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 BCAS1O75363 584 aaPredicted RBP3.37□□□□□ -1.87
VPS36-206ENST00000497149 UGT2B17O75795 530 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 CA1P00915 261 aaPredicted RBP3.37□□□□□ -1.87
VPS36-206ENST00000497149 CYP2B6P20813 491 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 ATP6V1C1P21283 382 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 CALB2P22676 271 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 NMT1P30419 496 aaKnown RBP3.37□□□□□ -1.87
VPS36-206ENST00000497149 CD80P33681 288 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 EPHX2P34913 555 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 AP3M2P53677 418 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 SELPLGQ14242 412 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 ELAVL3Q14576 367 aaKnown RBP3.37□□□□□ -1.87
VPS36-206ENST00000497149 SYPL1Q16563 259 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 TPD52L1Q16890 204 aaPredicted RBP3.37□□□□□ -1.87
VPS36-206ENST00000497149 GGTA1PQ4G0N0 100 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 CFAP221Q4G0U5 840 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 LIPNQ5VXI9 398 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 SLC25A24Q6NUK1 477 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 FAM71F2Q6NXP2 309 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 CES3Q6UWW8 571 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 ACOT1Q86TX2 421 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms