RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 CBFBQ13951 182 aa19.81■□□□□ 0.76
C9orf3-222ENST00000496567 GANABQ14697 944 aaKnown RBP19.81■□□□□ 0.76
C9orf3-222ENST00000496567 CYP2R1Q6VVX0 501 aa19.81■□□□□ 0.76
C9orf3-222ENST00000496567 RAB3IPQ96QF0 476 aaPredicted RBP19.81■□□□□ 0.76
C9orf3-222ENST00000496567 OLAHQ9NV23 265 aa19.81■□□□□ 0.76
C9orf3-222ENST00000496567 LUZP4Q9P127 313 aa19.81■□□□□ 0.76
C9orf3-222ENST00000496567 FBXL2Q9UKC9 423 aa19.81■□□□□ 0.76
C9orf3-222ENST00000496567 SLC9A8Q9Y2E8 581 aa19.81■□□□□ 0.76
C9orf3-222ENST00000496567 ANKUB1A6NFN9 424 aa19.8■□□□□ 0.76
C9orf3-222ENST00000496567 OIP5O43482 229 aa19.8■□□□□ 0.76
C9orf3-222ENST00000496567 BCAS1O75363 584 aaPredicted RBP19.8■□□□□ 0.76
C9orf3-222ENST00000496567 CIB2O75838 187 aa19.8■□□□□ 0.76
C9orf3-222ENST00000496567 NUDT14O95848 222 aa19.8■□□□□ 0.76
C9orf3-222ENST00000496567 CRYABP02511 175 aaKnown RBP19.8■□□□□ 0.76
C9orf3-222ENST00000496567 UQCRBP14927 111 aa19.8■□□□□ 0.76
C9orf3-222ENST00000496567 DSCR4P56555 118 aaPredicted RBP19.8■□□□□ 0.76
C9orf3-222ENST00000496567 PPIAP62937 165 aaKnown RBP19.8■□□□□ 0.76
C9orf3-222ENST00000496567 PMP22Q01453 160 aa19.8■□□□□ 0.76
C9orf3-222ENST00000496567 FLOT2Q14254 428 aa19.8■□□□□ 0.76
C9orf3-222ENST00000496567 Q8NA96 180 aa19.8■□□□□ 0.76
C9orf3-222ENST00000496567 ARSGQ96EG1 525 aa19.8■□□□□ 0.76
C9orf3-222ENST00000496567 QPCTLQ9NXS2 382 aa19.8■□□□□ 0.76
C9orf3-222ENST00000496567 PRDM4Q9UKN5 801 aa19.8■□□□□ 0.76
C9orf3-222ENST00000496567 HRH3Q9Y5N1 445 aa19.8■□□□□ 0.76
C9orf3-222ENST00000496567 NBEAQ8NFP9 2946 aa19.8■□□□□ 0.76
C9orf3-222ENST00000496567 CFAP73A6NFT4 308 aa19.79■□□□□ 0.76
C9orf3-222ENST00000496567 TMEM229AB2RXF0 380 aa19.79■□□□□ 0.76
C9orf3-222ENST00000496567 FAM47E-STBD1D6RA91 191 aa19.79■□□□□ 0.76
C9orf3-222ENST00000496567 GMFGO60234 142 aa19.79■□□□□ 0.76
C9orf3-222ENST00000496567 EPPINO95925 133 aa19.79■□□□□ 0.76
C9orf3-222ENST00000496567 RFPL3SP0C7P2 107 aa19.79■□□□□ 0.76
C9orf3-222ENST00000496567 ZNF24P17028 368 aa19.79■□□□□ 0.76
C9orf3-222ENST00000496567 PGCP20142 388 aa19.79■□□□□ 0.76
C9orf3-222ENST00000496567 ATP6V1B2P21281 511 aa19.79■□□□□ 0.76
C9orf3-222ENST00000496567 GDF1P27539 372 aa19.79■□□□□ 0.76
C9orf3-222ENST00000496567 FKBP9P1Q75LS8 142 aa19.79■□□□□ 0.76
C9orf3-222ENST00000496567 UTP4Q969X6 686 aaKnown RBP19.79■□□□□ 0.76
C9orf3-222ENST00000496567 ARHGDIGQ99819 225 aa19.79■□□□□ 0.76
C9orf3-222ENST00000496567 UBQLN3Q9H347 655 aa19.79■□□□□ 0.76
C9orf3-222ENST00000496567 ZNF703Q9H7S9 590 aaPredicted RBP19.79■□□□□ 0.76
C9orf3-222ENST00000496567 SH3GLB1Q9Y371 365 aa19.79■□□□□ 0.76
C9orf3-222ENST00000496567 FAM166BA8MTA8 275 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 B4DXG7 233 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 LINGO3P0C6S8 592 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 GKN3PP0CG01 181 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 ZNF41P51814 821 aaPredicted RBP19.78■□□□□ 0.76
C9orf3-222ENST00000496567 RGS8P57771 180 aaPredicted RBP19.78■□□□□ 0.76
C9orf3-222ENST00000496567 TOMM20Q15388 145 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 NRF1Q16656 503 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 FAM180AQ6UWF9 173 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 COMTD1Q86VU5 262 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 FAM109AQ8N4B1 249 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 TMEM251Q8N6I4 163 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 GPR119Q8TDV5 335 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 C1GALT1C1Q96EU7 318 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 HSH2DQ96JZ2 352 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 TAAR6Q96RI8 345 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 ANAPC2Q9UJX6 822 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 DKKL1Q9UK85 242 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 MRPS18CQ9Y3D5 142 aaKnown RBP19.78■□□□□ 0.76
C9orf3-222ENST00000496567 BOD1L1Q8NFC6 3051 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 A0A087WZY1 265 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 FAAHO00519 579 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 TFECO14948 347 aaPredicted RBP19.78■□□□□ 0.76
C9orf3-222ENST00000496567 PRKD3O94806 890 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 DPP4P27487 766 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 SRD5A2P31213 254 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 RYKP34925 604 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 ALDH6A1Q02252 535 aaKnown RBP19.78■□□□□ 0.76
C9orf3-222ENST00000496567 EPS8Q12929 822 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 IFI44LQ53G44 452 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 C1orf146Q5VVC0 180 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 VTCN1Q7Z7D3 282 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 RANBP3LQ86VV4 465 aaPredicted RBP19.78■□□□□ 0.76
C9orf3-222ENST00000496567 OR10Q1Q8NGQ4 319 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 GEMIN6Q8WXD5 167 aaKnown RBP19.78■□□□□ 0.76
C9orf3-222ENST00000496567 SLC39A7Q92504 469 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 PYURFQ96I23 114 aa19.78■□□□□ 0.76
C9orf3-222ENST00000496567 TLN1Q9Y490 2541 aaKnown RBP19.77■□□□□ 0.76
C9orf3-222ENST00000496567 AQP12BA6NM10 295 aa19.77■□□□□ 0.76
C9orf3-222ENST00000496567 FRS3O43559 492 aa19.77■□□□□ 0.76
C9orf3-222ENST00000496567 TRAPPC6AO75865 159 aa19.77■□□□□ 0.76
C9orf3-222ENST00000496567 NQO1P15559 274 aaKnown RBP19.77■□□□□ 0.76
C9orf3-222ENST00000496567 ACAA2P42765 397 aaKnown RBP19.77■□□□□ 0.76
C9orf3-222ENST00000496567 MAGEA5P43359 124 aa19.77■□□□□ 0.76
C9orf3-222ENST00000496567 COPZ1P61923 177 aa19.77■□□□□ 0.76
C9orf3-222ENST00000496567 KCNC4Q03721 635 aa19.77■□□□□ 0.76
C9orf3-222ENST00000496567 SLC10A1Q14973 349 aa19.77■□□□□ 0.76
C9orf3-222ENST00000496567 RNFT1Q5M7Z0 435 aa19.77■□□□□ 0.76
C9orf3-222ENST00000496567 AQP12AQ8IXF9 295 aa19.77■□□□□ 0.76
C9orf3-222ENST00000496567 ZNF563Q8TA94 476 aa19.77■□□□□ 0.76
C9orf3-222ENST00000496567 TESQ9UGI8 421 aaKnown RBP19.77■□□□□ 0.76
C9orf3-222ENST00000496567 RRP15Q9Y3B9 282 aaKnown RBP19.77■□□□□ 0.76
C9orf3-222ENST00000496567 M0R3H8 397 aa19.76■□□□□ 0.75
C9orf3-222ENST00000496567 CDC40O60508 579 aaKnown RBP eCLIP19.76■□□□□ 0.75
C9orf3-222ENST00000496567 HPNP05981 417 aa19.76■□□□□ 0.75
C9orf3-222ENST00000496567 NFATC3Q12968 1075 aa19.76■□□□□ 0.75
C9orf3-222ENST00000496567 ARSKQ6UWY0 536 aa19.76■□□□□ 0.75
C9orf3-222ENST00000496567 CARM1Q86X55 608 aa19.76■□□□□ 0.75
C9orf3-222ENST00000496567 VANGL1Q8TAA9 524 aaPredicted RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms