RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 CARM1Q86X55 608 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 UBQLNLQ8IYU4 475 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 ABTB1Q969K4 478 aaPredicted RBP7.91□□□□□ -1.14
U2AF1-212ENST00000496462 ANGPTL4Q9BY76 406 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 KCNN2Q9H2S1 579 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 KAT8Q9H7Z6 458 aaKnown RBP7.91□□□□□ -1.14
U2AF1-212ENST00000496462 GPATCH2Q9NW75 528 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 RPH3AQ9Y2J0 694 aaPredicted RBP7.91□□□□□ -1.14
U2AF1-212ENST00000496462 LRP4O75096 1905 aa7.91□□□□□ -1.14
U2AF1-212ENST00000496462 SNTNA6NMZ2 147 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 H3BML4 177 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 GPR171O14626 319 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 SNPHO15079 494 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 PDE5AO76074 875 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 IL2RAP01589 272 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 PTPN6P29350 595 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 NOS3P29474 1203 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 RPL4P36578 427 aaKnown RBP7.9□□□□□ -1.14
U2AF1-212ENST00000496462 IDH2P48735 452 aaKnown RBP7.9□□□□□ -1.14
U2AF1-212ENST00000496462 RAD23AP54725 363 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 ABHD12BQ7Z5M8 362 aaPredicted RBP7.9□□□□□ -1.14
U2AF1-212ENST00000496462 CLEC4FQ8N1N0 589 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 FAM110BQ8TC76 370 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 GRHL3Q8TE85 626 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 ASB9Q96DX5 294 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 Q9H521 79 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 SIRT3Q9NTG7 399 aaPredicted RBP7.9□□□□□ -1.14
U2AF1-212ENST00000496462 EXO1Q9UQ84 846 aaKnown RBP7.9□□□□□ -1.14
U2AF1-212ENST00000496462 LAMA5O15230 3695 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 NPIPA2E9PIF3 369 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 NPIPA3F8WFD2 350 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 SULT2B1O00204 365 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 HMGN4O00479 90 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 H1F0P07305 194 aaKnown RBP7.9□□□□□ -1.14
U2AF1-212ENST00000496462 SAGP10523 405 aaPredicted RBP7.9□□□□□ -1.14
U2AF1-212ENST00000496462 ATP6V1B2P21281 511 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 CHMP24386 653 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 CASP3P42574 277 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 CDKN2CP42773 168 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 SLC35A1P78382 337 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 ALG10BQ5I7T1 473 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 MRPL2Q5T653 305 aaKnown RBP7.9□□□□□ -1.14
U2AF1-212ENST00000496462 TMEM225Q6GV28 225 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 RPUSD3Q6P087 351 aaKnown RBP7.9□□□□□ -1.14
U2AF1-212ENST00000496462 C3orf33Q6P1S2 294 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 TREML1Q86YW5 311 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 CPT1CQ8TCG5 803 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 PYURFQ96I23 114 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 TEX37Q96LM6 180 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 LRMDAQ9H2I8 198 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 MED11Q9P086 117 aa7.9□□□□□ -1.14
U2AF1-212ENST00000496462 BPTFQ12830 3046 aa7.9□□□□□ -1.15
U2AF1-212ENST00000496462 AGAP5A6NIR3 686 aa7.9□□□□□ -1.15
U2AF1-212ENST00000496462 KIAA0513O60268 411 aa7.9□□□□□ -1.15
U2AF1-212ENST00000496462 OR10H3O60404 316 aa7.9□□□□□ -1.15
U2AF1-212ENST00000496462 MAN1A2O60476 641 aa7.9□□□□□ -1.15
U2AF1-212ENST00000496462 IDUAP35475 653 aa7.9□□□□□ -1.15
U2AF1-212ENST00000496462 KCNJ5P48544 419 aa7.9□□□□□ -1.15
U2AF1-212ENST00000496462 PSG6Q00889 435 aa7.9□□□□□ -1.15
U2AF1-212ENST00000496462 SRSF6Q13247 344 aaKnown RBP7.9□□□□□ -1.15
U2AF1-212ENST00000496462 ZNF141Q15928 474 aa7.9□□□□□ -1.15
U2AF1-212ENST00000496462 CES4AQ5XG92 561 aa7.9□□□□□ -1.15
U2AF1-212ENST00000496462 CGB2Q6NT52 195 aa7.9□□□□□ -1.15
U2AF1-212ENST00000496462 MAMDC2Q7Z304 686 aaPredicted RBP7.9□□□□□ -1.15
U2AF1-212ENST00000496462 MDGA2Q7Z553 956 aa7.9□□□□□ -1.15
U2AF1-212ENST00000496462 NANOGNBQ7Z5D8 188 aa7.9□□□□□ -1.15
U2AF1-212ENST00000496462 SMYD1Q8NB12 490 aa7.9□□□□□ -1.15
U2AF1-212ENST00000496462 SLC39A3Q9BRY0 314 aa7.9□□□□□ -1.15
U2AF1-212ENST00000496462 IL1RAPQ9NPH3 570 aa7.9□□□□□ -1.15
U2AF1-212ENST00000496462 PARPBPQ9NWS1 579 aa7.9□□□□□ -1.15
U2AF1-212ENST00000496462 A0A1B0GUH1 482 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 VSTM5A8MXK1 200 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 XKRYO14609 159 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 OPN1SWP03999 348 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 RAP2AP10114 183 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 ADH6P28332 368 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 SRYQ05066 204 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 FBXW10Q5XX13 1052 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 ULK2Q8IYT8 1036 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 ATG16L2Q8NAA4 619 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 ASB5Q8WWX0 329 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 ADIPOR1Q96A54 375 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 SLC25A36Q96CQ1 311 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 KCNS3Q9BQ31 491 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 EXOSC3Q9NQT5 275 aaKnown RBP7.89□□□□□ -1.15
U2AF1-212ENST00000496462 SAMHD1Q9Y3Z3 626 aaKnown RBP7.89□□□□□ -1.15
U2AF1-212ENST00000496462 ARPC2O15144 300 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 GADD45GO95257 159 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 IFNGP01579 166 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 CELA2AP08217 269 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 CT45A8P0DMV1 189 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 CT45A9P0DMV2 189 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 THRBP10828 461 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 BMP2P12643 396 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 GSTM3P21266 225 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 ELK4P28324 431 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 FOXL2P58012 376 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 QPRTQ15274 297 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 CT45A2Q5DJT8 189 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 SWT1Q5T5J6 900 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms