RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 TMEM52BQ4KMG9 183 aa3.35□□□□□ -1.87
NCKAP1-208ENST00000495619 NIPAL3Q6P499 406 aa3.35□□□□□ -1.87
NCKAP1-208ENST00000495619 LRRC8BQ6P9F7 803 aa3.35□□□□□ -1.87
NCKAP1-208ENST00000495619 CCDC73Q6ZRK6 1079 aa3.35□□□□□ -1.87
NCKAP1-208ENST00000495619 CATSPER4Q7RTX7 472 aa3.35□□□□□ -1.87
NCKAP1-208ENST00000495619 HSD11B1LQ7Z5J1 315 aa3.35□□□□□ -1.87
NCKAP1-208ENST00000495619 MISPQ8IVT2 679 aa3.35□□□□□ -1.87
NCKAP1-208ENST00000495619 GCNT2Q8N0V5 402 aa3.35□□□□□ -1.87
NCKAP1-208ENST00000495619 ARL6IP6Q8N6S5 226 aa3.35□□□□□ -1.87
NCKAP1-208ENST00000495619 OR9A4Q8NGU2 314 aa3.35□□□□□ -1.87
NCKAP1-208ENST00000495619 DNAJA4Q8WW22 397 aaPredicted RBP3.35□□□□□ -1.87
NCKAP1-208ENST00000495619 FAM104AQ969W3 186 aa3.35□□□□□ -1.87
NCKAP1-208ENST00000495619 TBC1D31Q96DN5 1066 aa3.35□□□□□ -1.87
NCKAP1-208ENST00000495619 STARD4Q96DR4 205 aa3.35□□□□□ -1.87
NCKAP1-208ENST00000495619 NOL4LQ96MY1 436 aaPredicted RBP3.35□□□□□ -1.87
NCKAP1-208ENST00000495619 PLEKHF1Q96S99 279 aa3.35□□□□□ -1.87
NCKAP1-208ENST00000495619 TBCDQ9BTW9 1192 aa3.35□□□□□ -1.87
NCKAP1-208ENST00000495619 MRPL13Q9BYD1 178 aaKnown RBP3.35□□□□□ -1.87
NCKAP1-208ENST00000495619 IFT52Q9Y366 437 aa3.35□□□□□ -1.87
NCKAP1-208ENST00000495619 SLCO1B1Q9Y6L6 691 aa3.35□□□□□ -1.87
NCKAP1-208ENST00000495619 PLEKHG1Q9ULL1 1385 aa3.35□□□□□ -1.87
NCKAP1-208ENST00000495619 CDC42BPBQ9Y5S2 1711 aa3.34□□□□□ -1.87
NCKAP1-208ENST00000495619 A0A1B0GUL7 405 aa3.34□□□□□ -1.87
NCKAP1-208ENST00000495619 TUBAL3A6NHL2 446 aa3.34□□□□□ -1.87
NCKAP1-208ENST00000495619 PES1O00541 588 aaKnown RBP3.34□□□□□ -1.87
NCKAP1-208ENST00000495619 TIMP1P01033 207 aa3.34□□□□□ -1.87
NCKAP1-208ENST00000495619 ALOX5P09917 674 aa3.34□□□□□ -1.87
NCKAP1-208ENST00000495619 CCNE1P24864 410 aa3.34□□□□□ -1.87
NCKAP1-208ENST00000495619 PTGFRP43088 359 aa3.34□□□□□ -1.87
NCKAP1-208ENST00000495619 KIR2DS2P43631 304 aa3.34□□□□□ -1.87
NCKAP1-208ENST00000495619 HTD2P86397 168 aa3.34□□□□□ -1.87
NCKAP1-208ENST00000495619 SCGB2A2Q13296 93 aa3.34□□□□□ -1.87
NCKAP1-208ENST00000495619 LINC01620Q4KN68 170 aa3.34□□□□□ -1.87
NCKAP1-208ENST00000495619 ZNF311Q5JNZ3 666 aa3.34□□□□□ -1.87
NCKAP1-208ENST00000495619 KRTAP5-2Q701N4 177 aa3.34□□□□□ -1.87
NCKAP1-208ENST00000495619 OR5AU1Q8NGC0 362 aa3.34□□□□□ -1.87
NCKAP1-208ENST00000495619 ARNTL2Q8WYA1 636 aa3.34□□□□□ -1.87
NCKAP1-208ENST00000495619 DCUN1D4Q92564 292 aa3.34□□□□□ -1.87
NCKAP1-208ENST00000495619 TMEM101Q96IK0 257 aa3.34□□□□□ -1.87
NCKAP1-208ENST00000495619 NRTNQ99748 197 aa3.34□□□□□ -1.87
NCKAP1-208ENST00000495619 SLC30A2Q9BRI3 323 aa3.34□□□□□ -1.87
NCKAP1-208ENST00000495619 ZNF331Q9NQX6 463 aaPredicted RBP3.34□□□□□ -1.87
NCKAP1-208ENST00000495619 CYTL1Q9NRR1 136 aa3.34□□□□□ -1.87
NCKAP1-208ENST00000495619 UTP6Q9NYH9 597 aaKnown RBP3.34□□□□□ -1.87
NCKAP1-208ENST00000495619 SDHDO14521 159 aa3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 LANCL1O43813 399 aa3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 SUPT7LO94864 414 aa3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 OR4F21O95013 312 aa3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 CSF2P04141 144 aa3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 IGLL1P15814 213 aa3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 GCFC2P16383 781 aaKnown RBP3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 ATP5A1P25705 553 aaKnown RBP3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 CD1BP29016 333 aa3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 HPDP32754 393 aaPredicted RBP3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 CD86P42081 329 aa3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 NOVA1P51513 510 aaKnown RBP3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 MTTPP55157 894 aa3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 RPL8P62917 257 aaKnown RBP3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 MAP2K1Q02750 393 aaPredicted RBP3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 EGFEM1PQ0D2K5 195 aa3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 TRIP10Q15642 601 aa3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 TFDP3Q5H9I0 405 aa3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 PVRIGQ6DKI7 326 aa3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 ARSKQ6UWY0 536 aa3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 CENPUQ71F23 418 aa3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 GPA33Q99795 319 aa3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 POLR3FQ9H1D9 316 aaPredicted RBP3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 ZDHHC11Q9H8X9 412 aa3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 SH2D2AQ9NP31 389 aa3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 CYTH4Q9UIA0 394 aa3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 RABL2BQ9UNT1 228 aa3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 B9D1Q9UPM9 204 aa3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 IKBKGQ9Y6K9 419 aa3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 CDH10Q9Y6N8 788 aa3.33□□□□□ -1.88
NCKAP1-208ENST00000495619 LRRK1Q38SD2 2015 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 IGHV1OR15-1A0A075B7D0 117 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 A0A087WZY1 265 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 IGKV6-21A0A0C4DH24 114 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 ESYT2A0FGR8 921 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 USP27XA6NNY8 438 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 CLDN3O15551 220 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 DUX1O43812 170 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 STX11O75558 287 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 OPN1LWP04000 364 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 HBQ1P09105 142 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 PDHBP11177 359 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 PAICSP22234 425 aaKnown RBP3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 KIF5BP33176 963 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 NUP107P57740 925 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 SLC10A7Q0GE19 358 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 SYPL1Q16563 259 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 LANCL3Q6ZV70 420 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 ANKRD37Q7Z713 158 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 SKA3Q8IX90 412 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 TMEM252Q8N6L7 170 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 SELENOMQ8WWX9 145 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 VPS35Q96QK1 796 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 TXN2Q99757 166 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 PAIP2Q9BPZ3 127 aaKnown RBP3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 PPDPFQ9H3Y8 114 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms