RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 CFAP46Q8IYW2 2715 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 NINQ8N4C6 2090 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 CDHR4A6H8M9 788 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 CLDN24A6NM45 220 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 J3QKU1 62 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 M0QX08 132 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 BCKDKO14874 412 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 GSTA4O15217 222 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 ZIC3O60481 467 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 GMNNO75496 209 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 ACTL6AO96019 429 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 CASP6P55212 293 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 EEF1A1P68104 462 aaKnown RBP15.52■□□□□ 0.08
HDAC6-235ENST00000495515 HSF1Q00613 529 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 NDUFAF6Q330K2 333 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 SPATS1Q496A3 300 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 SAMD4BQ5PRF9 694 aaKnown RBP15.52■□□□□ 0.08
HDAC6-235ENST00000495515 RAET1LQ5VY80 246 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 DHRS4L2Q6PKH6 230 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 ENPP6Q6UWR7 440 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 ZNF836Q6ZNA1 936 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 CCDC80Q76M96 950 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 ZNF550Q7Z398 422 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 GRAMD2AQ8IUY3 354 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 DEFB107AQ8IZN7 70 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 TMEM234Q8WY98 164 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 CNOT9Q92600 299 aaKnown RBP15.52■□□□□ 0.08
HDAC6-235ENST00000495515 SLC35B4Q969S0 331 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 KCTD14Q9BQ13 255 aaPredicted RBP15.52■□□□□ 0.08
HDAC6-235ENST00000495515 EVA1AQ9H8M9 152 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 MED17Q9NVC6 651 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 DNAJB12Q9NXW2 375 aaKnown RBP15.52■□□□□ 0.08
HDAC6-235ENST00000495515 STOML1Q9UBI4 398 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 VDAC3Q9Y277 283 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 RPH3AQ9Y2J0 694 aaPredicted RBP15.52■□□□□ 0.08
HDAC6-235ENST00000495515 LIPGQ9Y5X9 500 aa15.52■□□□□ 0.08
HDAC6-235ENST00000495515 C7orf72A4D263 438 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 CFAP73A6NFT4 308 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 B4DXG7 233 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 PRRG2O14669 202 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 OIP5O43482 229 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 SLC19A2O60779 497 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 WISP2O76076 250 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 UBOX5O94941 541 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 MFN2O95140 757 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 LINGO3P0C6S8 592 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 ZNF17P17021 662 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 CHMP24386 653 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 GSK3BP49841 420 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 CBX1P83916 185 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 NHSL2Q5HYW2 709 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 WLSQ5T9L3 541 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 ARSKQ6UWY0 536 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 SPPL2CQ8IUH8 684 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 ARHGAP24Q8N264 748 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 RBM15BQ8NDT2 890 aaKnown RBP15.51■□□□□ 0.07
HDAC6-235ENST00000495515 ZNF563Q8TA94 476 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 GPR119Q8TDV5 335 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 ABTB1Q969K4 478 aaPredicted RBP15.51■□□□□ 0.07
HDAC6-235ENST00000495515 CDRT15Q96T59 188 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 PINK1Q9BXM7 581 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 C1orf21Q9H246 121 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 ACAD8Q9UKU7 415 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 BSNQ9UPA5 3926 aa15.51■□□□□ 0.07
HDAC6-235ENST00000495515 NPIPA2E9PIF3 369 aa15.5■□□□□ 0.07
HDAC6-235ENST00000495515 NPIPA3F8WFD2 350 aa15.5■□□□□ 0.07
HDAC6-235ENST00000495515 TPOP07202 933 aa15.5■□□□□ 0.07
HDAC6-235ENST00000495515 T-ENOLP0DO92 83 aa15.5■□□□□ 0.07
HDAC6-235ENST00000495515 TCEA1P23193 301 aaKnown RBP15.5■□□□□ 0.07
HDAC6-235ENST00000495515 ADH6P28332 368 aa15.5■□□□□ 0.07
HDAC6-235ENST00000495515 RYKP34925 604 aa15.5■□□□□ 0.07
HDAC6-235ENST00000495515 COPZ1P61923 177 aa15.5■□□□□ 0.07
HDAC6-235ENST00000495515 MRPL49Q13405 166 aaKnown RBP15.5■□□□□ 0.07
HDAC6-235ENST00000495515 QPRTQ15274 297 aa15.5■□□□□ 0.07
HDAC6-235ENST00000495515 PLPPR5Q32ZL2 321 aa15.5■□□□□ 0.07
HDAC6-235ENST00000495515 VASNQ6EMK4 673 aa15.5■□□□□ 0.07
HDAC6-235ENST00000495515 PM20D2Q8IYS1 436 aa15.5■□□□□ 0.07
HDAC6-235ENST00000495515 EID3Q8N140 333 aa15.5■□□□□ 0.07
HDAC6-235ENST00000495515 GTPBP8Q8N3Z3 284 aaPredicted RBP15.5■□□□□ 0.07
HDAC6-235ENST00000495515 FBXO27Q8NI29 283 aa15.5■□□□□ 0.07
HDAC6-235ENST00000495515 FAM57AQ8TBR7 257 aa15.5■□□□□ 0.07
HDAC6-235ENST00000495515 ST8SIA1Q92185 356 aa15.5■□□□□ 0.07
HDAC6-235ENST00000495515 MRGPRX4Q96LA9 322 aa15.5■□□□□ 0.07
HDAC6-235ENST00000495515 RLIMQ9NVW2 624 aa15.5■□□□□ 0.07
HDAC6-235ENST00000495515 SLC6A5Q9Y345 797 aa15.5■□□□□ 0.07
HDAC6-235ENST00000495515 EML6Q6ZMW3 1958 aa15.49■□□□□ 0.07
HDAC6-235ENST00000495515 SYT5O00445 386 aa15.49■□□□□ 0.07
HDAC6-235ENST00000495515 FAAHO00519 579 aa15.49■□□□□ 0.07
HDAC6-235ENST00000495515 ATP5HO75947 161 aa15.49■□□□□ 0.07
HDAC6-235ENST00000495515 C8BP07358 591 aa15.49■□□□□ 0.07
HDAC6-235ENST00000495515 BMP7P18075 431 aa15.49■□□□□ 0.07
HDAC6-235ENST00000495515 GNLYP22749 145 aa15.49■□□□□ 0.07
HDAC6-235ENST00000495515 KDELR2P33947 212 aa15.49■□□□□ 0.07
HDAC6-235ENST00000495515 CPOXP36551 454 aa15.49■□□□□ 0.07
HDAC6-235ENST00000495515 RASSF2P50749 326 aa15.49■□□□□ 0.07
HDAC6-235ENST00000495515 GFRA1P56159 465 aa15.49■□□□□ 0.07
HDAC6-235ENST00000495515 SF3B4Q15427 424 aaKnown RBP eCLIP15.49■□□□□ 0.076e-7■■■■□ 22.1
HDAC6-235ENST00000495515 CLIP4Q8N3C7 705 aa15.49■□□□□ 0.07
HDAC6-235ENST00000495515 UGT2B28Q9BY64 529 aa15.49■□□□□ 0.07
HDAC6-235ENST00000495515 SPRR3Q9UBC9 169 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms