RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 GPR68Q15743 365 aa15.02■□□□□ -0
CBX4-204ENST00000495122 ZNF141Q15928 474 aa15.02■□□□□ -0
CBX4-204ENST00000495122 GPR107Q5VW38 600 aa15.02■□□□□ -0
CBX4-204ENST00000495122 RNLSQ5VYX0 342 aa15.02■□□□□ -0
CBX4-204ENST00000495122 TMEM71Q6P5X7 295 aa15.02■□□□□ -0
CBX4-204ENST00000495122 ZNF613Q6PF04 617 aa15.02■□□□□ -0
CBX4-204ENST00000495122 ZNF730Q6ZMV8 503 aa15.02■□□□□ -0
CBX4-204ENST00000495122 ZER1Q7Z7L7 766 aa15.02■□□□□ -0
CBX4-204ENST00000495122 CLIP4Q8N3C7 705 aa15.02■□□□□ -0
CBX4-204ENST00000495122 PMEPA1Q969W9 287 aa15.02■□□□□ -0
CBX4-204ENST00000495122 ZG16BQ96DA0 208 aa15.02■□□□□ -0
CBX4-204ENST00000495122 HS6ST2Q96MM7 605 aa15.02■□□□□ -0
CBX4-204ENST00000495122 COG8Q96MW5 612 aa15.02■□□□□ -0
CBX4-204ENST00000495122 HOXD1Q9GZZ0 328 aa15.02■□□□□ -0
CBX4-204ENST00000495122 SPRTNQ9H040 489 aaPredicted RBP15.02■□□□□ -0
CBX4-204ENST00000495122 ACOT13Q9NPJ3 140 aa15.02■□□□□ -0
CBX4-204ENST00000495122 LANCL2Q9NS86 450 aa15.02■□□□□ -0
CBX4-204ENST00000495122 ENPP5Q9UJA9 477 aa15.02■□□□□ -0
CBX4-204ENST00000495122 NINQ8N4C6 2090 aa15.02□□□□□ -0.01
CBX4-204ENST00000495122 NUP210LQ5VU65 1888 aa15.01□□□□□ -0.01
CBX4-204ENST00000495122 HTR3EA5X5Y0 456 aa15.01□□□□□ -0.01
CBX4-204ENST00000495122 TP53P04637 393 aaPredicted RBP15.01□□□□□ -0.01
CBX4-204ENST00000495122 PLA2G2AP14555 144 aa15.01□□□□□ -0.01
CBX4-204ENST00000495122 DRD5P21918 477 aa15.01□□□□□ -0.01
CBX4-204ENST00000495122 PEX19P40855 299 aa15.01□□□□□ -0.01
CBX4-204ENST00000495122 DCAF7P61962 342 aa15.01□□□□□ -0.01
CBX4-204ENST00000495122 CDK5Q00535 292 aa15.01□□□□□ -0.01
CBX4-204ENST00000495122 PSG6Q00889 435 aa15.01□□□□□ -0.01
CBX4-204ENST00000495122 ACY1Q03154 408 aa15.01□□□□□ -0.01
CBX4-204ENST00000495122 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.01□□□□□ -0.01
CBX4-204ENST00000495122 FLYWCH1Q4VC44 716 aa15.01□□□□□ -0.01
CBX4-204ENST00000495122 MRPL2Q5T653 305 aaKnown RBP15.01□□□□□ -0.01
CBX4-204ENST00000495122 RPL13AP3Q6NVV1 102 aa15.01□□□□□ -0.01
CBX4-204ENST00000495122 AHSA2Q719I0 299 aa15.01□□□□□ -0.01
CBX4-204ENST00000495122 OLIG3Q7RTU3 272 aa15.01□□□□□ -0.01
CBX4-204ENST00000495122 ZNF550Q7Z398 422 aa15.01□□□□□ -0.01
CBX4-204ENST00000495122 GDF7Q7Z4P5 450 aa15.01□□□□□ -0.01
CBX4-204ENST00000495122 VASH2Q86V25 355 aa15.01□□□□□ -0.01
CBX4-204ENST00000495122 CCDC103Q8IW40 242 aa15.01□□□□□ -0.01
CBX4-204ENST00000495122 ZNF440Q8IYI8 595 aa15.01□□□□□ -0.01
CBX4-204ENST00000495122 FAM26EQ8N5C1 309 aa15.01□□□□□ -0.01
CBX4-204ENST00000495122 TEX47Q8TBZ9 253 aa15.01□□□□□ -0.01
CBX4-204ENST00000495122 PIK3R3Q92569 461 aa15.01□□□□□ -0.01
CBX4-204ENST00000495122 OSTF1Q92882 214 aa15.01□□□□□ -0.01
CBX4-204ENST00000495122 CDCA4Q9BXL8 241 aa15.01□□□□□ -0.01
CBX4-204ENST00000495122 MED17Q9NVC6 651 aa15.01□□□□□ -0.01
CBX4-204ENST00000495122 MRTO4Q9UKD2 239 aaKnown RBP15.01□□□□□ -0.01
CBX4-204ENST00000495122 GPR55Q9Y2T6 319 aaPredicted RBP15.01□□□□□ -0.01
CBX4-204ENST00000495122 RPL36Q9Y3U8 105 aaKnown RBP15.01□□□□□ -0.01
CBX4-204ENST00000495122 PCDHGA3Q9Y5H0 932 aa15.01□□□□□ -0.01
CBX4-204ENST00000495122 IGKV3D-11A0A0A0MRZ8 115 aa15□□□□□ -0.01
CBX4-204ENST00000495122 A0A1B0GX78 115 aa15□□□□□ -0.01
CBX4-204ENST00000495122 CPSF4LA6NMK7 179 aaKnown RBP15□□□□□ -0.01
CBX4-204ENST00000495122 NPIPB9F8W1W9 429 aa15□□□□□ -0.01
CBX4-204ENST00000495122 TGFBR3LH3BV60 316 aa15□□□□□ -0.01
CBX4-204ENST00000495122 SLC22A1O15245 554 aa15□□□□□ -0.01
CBX4-204ENST00000495122 TPST2O60704 377 aa15□□□□□ -0.01
CBX4-204ENST00000495122 WT1P19544 449 aaPredicted RBP15□□□□□ -0.01
CBX4-204ENST00000495122 FBLP22087 321 aaKnown RBP15□□□□□ -0.01
CBX4-204ENST00000495122 POU1F1P28069 291 aa15□□□□□ -0.01
CBX4-204ENST00000495122 RBM34P42696 430 aaKnown RBP15□□□□□ -0.01
CBX4-204ENST00000495122 SLC15A1P46059 708 aa15□□□□□ -0.01
CBX4-204ENST00000495122 OMPP47874 163 aa15□□□□□ -0.01
CBX4-204ENST00000495122 GIPRP48546 466 aa15□□□□□ -0.01
CBX4-204ENST00000495122 GP2P55259 537 aaKnown RBP15□□□□□ -0.01
CBX4-204ENST00000495122 ZNF267Q14586 743 aaPredicted RBP15□□□□□ -0.01
CBX4-204ENST00000495122 SMN1Q16637 294 aaKnown RBP15□□□□□ -0.01
CBX4-204ENST00000495122 TMEM164Q5U3C3 297 aa15□□□□□ -0.01
CBX4-204ENST00000495122 Q6ZPB1 254 aaPredicted RBP15□□□□□ -0.01
CBX4-204ENST00000495122 DGAT2L6Q6ZPD8 337 aa15□□□□□ -0.01
CBX4-204ENST00000495122 LINC00299Q6ZSB3 139 aa15□□□□□ -0.01
CBX4-204ENST00000495122 WDR53Q7Z5U6 358 aaPredicted RBP15□□□□□ -0.01
CBX4-204ENST00000495122 STX19Q8N4C7 294 aa15□□□□□ -0.01
CBX4-204ENST00000495122 ZNF615Q8N8J6 731 aa15□□□□□ -0.01
CBX4-204ENST00000495122 AGBL5Q8NDL9 886 aa15□□□□□ -0.01
CBX4-204ENST00000495122 SIMC1Q8NDZ2 872 aa15□□□□□ -0.01
CBX4-204ENST00000495122 GGHQ92820 318 aa15□□□□□ -0.01
CBX4-204ENST00000495122 SLC38A2Q96QD8 506 aa15□□□□□ -0.01
CBX4-204ENST00000495122 TAAR9Q96RI9 348 aa15□□□□□ -0.01
CBX4-204ENST00000495122 DDA1Q9BW61 102 aa15□□□□□ -0.01
CBX4-204ENST00000495122 TRIM2Q9C040 744 aa15□□□□□ -0.01
CBX4-204ENST00000495122 OR10A5Q9H207 317 aa15□□□□□ -0.01
CBX4-204ENST00000495122 TMEM27Q9HBJ8 222 aa15□□□□□ -0.01
CBX4-204ENST00000495122 MKKSQ9NPJ1 570 aaPredicted RBP15□□□□□ -0.01
CBX4-204ENST00000495122 NECTIN3Q9NQS3 549 aa15□□□□□ -0.01
CBX4-204ENST00000495122 WDR70Q9NW82 654 aa15□□□□□ -0.01
CBX4-204ENST00000495122 WARS2Q9UGM6 360 aaKnown RBP15□□□□□ -0.01
CBX4-204ENST00000495122 TLN1Q9Y490 2541 aaKnown RBP14.99□□□□□ -0.01
CBX4-204ENST00000495122 GXYLT2A0PJZ3 443 aa14.99□□□□□ -0.01
CBX4-204ENST00000495122 CLDN24A6NM45 220 aa14.99□□□□□ -0.01
CBX4-204ENST00000495122 STMND1H3BQB6 276 aa14.99□□□□□ -0.01
CBX4-204ENST00000495122 POLR1CO15160 346 aaPredicted RBP14.99□□□□□ -0.01
CBX4-204ENST00000495122 KLF4O43474 513 aa14.99□□□□□ -0.01
CBX4-204ENST00000495122 GABARAPO95166 117 aa14.99□□□□□ -0.01
CBX4-204ENST00000495122 CYC1P08574 325 aa14.99□□□□□ -0.01
CBX4-204ENST00000495122 FUT4P22083 530 aa14.99□□□□□ -0.01
CBX4-204ENST00000495122 CSTF2P33240 577 aaKnown RBP eCLIP14.99□□□□□ -0.01
CBX4-204ENST00000495122 PCYT1AP49585 367 aa14.99□□□□□ -0.01
CBX4-204ENST00000495122 ATP12AP54707 1039 aa14.99□□□□□ -0.01
CBX4-204ENST00000495122 MAT1AQ00266 395 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms