RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	COL28A1	Q2UY09	1125 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	TIGD3	Q6B0B8	471 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	WBP2NL	Q6ICG8	309 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	SPINK14	Q6IE38	97 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	DEF8	Q6ZN54	512 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	PLEKHM3	Q6ZWE6	761 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	MDGA2	Q7Z553	956 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	FAM86B1	Q8N7N1	296 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	PIK3C3	Q8NEB9	887 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	OR6T1	Q8NGN1	323 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	ZNF563	Q8TA94	476 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	C9orf43	Q8TAL5	461 aa	Predicted RBP	12.36	□□□□□ -0.43
APTX-231	ENST00000494973	DUSP19	Q8WTR2	217 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	CNOT9	Q92600	299 aa	Known RBP	12.36	□□□□□ -0.43
APTX-231	ENST00000494973	NTNG2	Q96CW9	530 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	SIGLEC12	Q96PQ1	595 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	MCHR1	Q99705	422 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	PIP5K1A	Q99755	562 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	BDH2	Q9BUT1	245 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	C12orf10	Q9HB07	376 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	GALNT9	Q9HCQ5	603 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	ZFP64	Q9NPA5	681 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	RLIM	Q9NVW2	624 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	QPCTL	Q9NXS2	382 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	PLA2G3	Q9NZ20	509 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	C6orf203	Q9P0P8	240 aa	Predicted RBP	12.36	□□□□□ -0.43
APTX-231	ENST00000494973	ZMIZ1	Q9ULJ6	1067 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	CHST2	Q9Y4C5	530 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	CNTRL	Q7Z7A1	2325 aa		12.36	□□□□□ -0.43
APTX-231	ENST00000494973	CHD8	Q9HCK8	2581 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	TRAPPC13	A5PLN9	417 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	GNGT2	O14610	69 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	PEX1	O43933	1283 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	CDC40	O60508	579 aa	Known RBP eCLIP	12.35	□□□□□ -0.43
APTX-231	ENST00000494973	EPPIN	O95925	133 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	CST1	P01037	141 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	LDLR	P01130	860 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	GCK	P35557	465 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	OR1E2	P47887	323 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	MAP2K6	P52564	334 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	ARHGDIA	P52565	204 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	DSCR4	P56555	118 aa	Predicted RBP	12.35	□□□□□ -0.43
APTX-231	ENST00000494973	VLDLR	P98155	873 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	ST3GAL3	Q11203	375 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	ZNF169	Q14929	603 aa	Predicted RBP	12.35	□□□□□ -0.43
APTX-231	ENST00000494973	GLYR1	Q49A26	553 aa	Predicted RBP	12.35	□□□□□ -0.43
APTX-231	ENST00000494973	GLIPR1L2	Q4G1C9	344 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	DESI1	Q6ICB0	168 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	ZNF227	Q86WZ6	799 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	OFCC1	Q8IZS5	231 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	FADS6	Q8N9I5	356 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	OR2M7	Q8NG81	312 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	OR2M3	Q8NG83	312 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	PYDC1	Q8WXC3	89 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	EXTL1	Q92935	676 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	ZBTB8A	Q96BR9	441 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	SH3YL1	Q96HL8	342 aa	Predicted RBP	12.35	□□□□□ -0.43
APTX-231	ENST00000494973	MPP4	Q96JB8	637 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	C7orf34	Q96L11	122 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	FNDC11	Q9BVV2	318 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	AMBRA1	Q9C0C7	1298 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	PRORY	Q9H606	182 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	REEP1	Q9H902	201 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	KRCC1	Q9NPI7	259 aa	Predicted RBP	12.35	□□□□□ -0.43
APTX-231	ENST00000494973	TAS2R10	Q9NYW0	307 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	NDUFAF4	Q9P032	175 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	DNAJB9	Q9UBS3	223 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	ACAD8	Q9UKU7	415 aa		12.35	□□□□□ -0.43
APTX-231	ENST00000494973	NIN	Q8N4C6	2090 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	C7orf72	A4D263	438 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	HTR3E	A5X5Y0	456 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	hCG_2039718	K7EN88	272 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	PNMT	P11086	282 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	GP1BB	P13224	206 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	ZNF17	P17021	662 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	FKBP2	P26885	142 aa	Known RBP	12.34	□□□□□ -0.43
APTX-231	ENST00000494973	ADH6	P28332	368 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	SRD5A2	P31213	254 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	SLC1A3	P43003	542 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	ZNF136	P52737	540 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	DLX5	P56178	289 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	ATP6AP1	Q15904	470 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	HYAL4	Q2M3T9	481 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	12.34	□□□□□ -0.43
APTX-231	ENST00000494973	COLEC12	Q5KU26	742 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	ENTPD8	Q5MY95	495 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	BICRAL	Q6AI39	1079 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	OR2T5	Q6IEZ7	315 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	RPUSD3	Q6P087	351 aa	Known RBP	12.34	□□□□□ -0.43
APTX-231	ENST00000494973	ULK3	Q6PHR2	472 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	C5orf46	Q6UWT4	87 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973		Q6ZS92	163 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	GRINA	Q7Z429	371 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	GALNTL5	Q7Z4T8	443 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	SLC22A16	Q86VW1	577 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	LINC00471	Q8N535	108 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	ZFP62	Q8NB50	900 aa	Predicted RBP	12.34	□□□□□ -0.43
APTX-231	ENST00000494973	OR10Q1	Q8NGQ4	319 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	OR2T29	Q8NH02	315 aa		12.34	□□□□□ -0.43
APTX-231	ENST00000494973	PHF10	Q8WUB8	498 aa	Known RBP	12.34	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms