RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ICAM5Q9UMF0 924 aa20.7■□□□□ 0.9
COL27A1-208ENST00000494780 CSPG4Q6UVK1 2322 aa20.69■□□□□ 0.9
COL27A1-208ENST00000494780 NUDT14O95848 222 aa20.69■□□□□ 0.9
COL27A1-208ENST00000494780 LAMP1P11279 417 aa20.69■□□□□ 0.9
COL27A1-208ENST00000494780 ALDH3A1P30838 453 aa20.69■□□□□ 0.9
COL27A1-208ENST00000494780 CCT3P49368 545 aaKnown RBP20.69■□□□□ 0.9
COL27A1-208ENST00000494780 ATP5J2P56134 94 aa20.69■□□□□ 0.9
COL27A1-208ENST00000494780 ARL13AQ5H913 290 aaPredicted RBP20.69■□□□□ 0.9
COL27A1-208ENST00000494780 DCST2Q5T1A1 773 aa20.69■□□□□ 0.9
COL27A1-208ENST00000494780 ADAM5Q6NVV9 412 aa20.69■□□□□ 0.9
COL27A1-208ENST00000494780 TFAP2EQ6VUC0 442 aa20.69■□□□□ 0.9
COL27A1-208ENST00000494780 GABRG1Q8N1C3 465 aa20.69■□□□□ 0.9
COL27A1-208ENST00000494780 AKAP1Q92667 903 aaKnown RBP eCLIP20.69■□□□□ 0.9
COL27A1-208ENST00000494780 APOPT1Q96IL0 206 aa20.69■□□□□ 0.9
COL27A1-208ENST00000494780 ATAD3AQ9NVI7 634 aa20.69■□□□□ 0.9
COL27A1-208ENST00000494780 FAF1Q9UNN5 650 aaPredicted RBP20.69■□□□□ 0.9
COL27A1-208ENST00000494780 CARD8Q9Y2G2 431 aa20.69■□□□□ 0.9
COL27A1-208ENST00000494780 OIP5O43482 229 aa20.68■□□□□ 0.9
COL27A1-208ENST00000494780 LYPLA1O75608 230 aaPredicted RBP20.68■□□□□ 0.9
COL27A1-208ENST00000494780 PRKD3O94806 890 aa20.68■□□□□ 0.9
COL27A1-208ENST00000494780 ATP12AP54707 1039 aa20.68■□□□□ 0.9
COL27A1-208ENST00000494780 PPP2R2BQ00005 443 aa20.68■□□□□ 0.9
COL27A1-208ENST00000494780 TP53BP2Q13625 1128 aa20.68■□□□□ 0.9
COL27A1-208ENST00000494780 LSM12Q3MHD2 195 aaKnown RBP20.68■□□□□ 0.9
COL27A1-208ENST00000494780 TMEM176BQ3YBM2 270 aaPredicted RBP20.68■□□□□ 0.9
COL27A1-208ENST00000494780 XKR7Q5GH72 579 aa20.68■□□□□ 0.9
COL27A1-208ENST00000494780 SFRP5Q5T4F7 317 aa20.68■□□□□ 0.9
COL27A1-208ENST00000494780 FCRLAQ7L513 359 aa20.68■□□□□ 0.9
COL27A1-208ENST00000494780 NUFIP2Q7Z417 695 aaKnown RBP20.68■□□□□ 0.9
COL27A1-208ENST00000494780 PRIMA1Q86XR5 153 aa20.68■□□□□ 0.9
COL27A1-208ENST00000494780 TUSC5Q8IXB3 177 aa20.68■□□□□ 0.9
COL27A1-208ENST00000494780 GPR119Q8TDV5 335 aa20.68■□□□□ 0.9
COL27A1-208ENST00000494780 CXorf36Q9H7Y0 433 aa20.68■□□□□ 0.9
COL27A1-208ENST00000494780 NGBQ9NPG2 151 aa20.68■□□□□ 0.9
COL27A1-208ENST00000494780 GPATCH2Q9NW75 528 aa20.68■□□□□ 0.9
COL27A1-208ENST00000494780 GIMAP2Q9UG22 337 aa20.68■□□□□ 0.9
COL27A1-208ENST00000494780 USF3Q68DE3 2245 aa20.68■□□□□ 0.9
COL27A1-208ENST00000494780 NPIPA5A0A0B4J1W7 369 aa20.67■□□□□ 0.9
COL27A1-208ENST00000494780 NPIPA7E9PJI5 369 aa20.67■□□□□ 0.9
COL27A1-208ENST00000494780 GTPBP1O00178 669 aaKnown RBP20.67■□□□□ 0.9
COL27A1-208ENST00000494780 PEX11AO75192 247 aa20.67■□□□□ 0.9
COL27A1-208ENST00000494780 YES1P07947 543 aa20.67■□□□□ 0.9
COL27A1-208ENST00000494780 NPIPA8P0DM63 369 aa20.67■□□□□ 0.9
COL27A1-208ENST00000494780 PRKCAP17252 672 aa20.67■□□□□ 0.9
COL27A1-208ENST00000494780 IL32P24001 234 aa20.67■□□□□ 0.9
COL27A1-208ENST00000494780 RPS4XP62701 263 aaKnown RBP20.67■□□□□ 0.9
COL27A1-208ENST00000494780 PTGR1Q14914 329 aa20.67■□□□□ 0.9
COL27A1-208ENST00000494780 SPDYE7PQ495Y7 208 aa20.67■□□□□ 0.9
COL27A1-208ENST00000494780 ATP6AP1LQ52LC2 224 aa20.67■□□□□ 0.9
COL27A1-208ENST00000494780 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.67■□□□□ 0.9
COL27A1-208ENST00000494780 ALKBH2Q6NS38 261 aa20.67■□□□□ 0.9
COL27A1-208ENST00000494780 SLC43A2Q8N370 569 aa20.67■□□□□ 0.9
COL27A1-208ENST00000494780 BANPQ8N9N5 519 aa20.67■□□□□ 0.9
COL27A1-208ENST00000494780 SFXN5Q8TD22 340 aa20.67■□□□□ 0.9
COL27A1-208ENST00000494780 ZFP90Q8TF47 636 aa20.67■□□□□ 0.9
COL27A1-208ENST00000494780 HSD17B8Q92506 261 aa20.67■□□□□ 0.9
COL27A1-208ENST00000494780 MOAP1Q96BY2 351 aa20.67■□□□□ 0.9
COL27A1-208ENST00000494780 MRGPRX4Q96LA9 322 aa20.67■□□□□ 0.9
COL27A1-208ENST00000494780 USB1Q9BQ65 265 aaKnown RBP20.67■□□□□ 0.9
COL27A1-208ENST00000494780 DTNAQ9Y4J8 743 aa20.67■□□□□ 0.9
COL27A1-208ENST00000494780 RNF115Q9Y4L5 304 aa20.67■□□□□ 0.9
COL27A1-208ENST00000494780 KCNE3Q9Y6H6 103 aa20.67■□□□□ 0.9
COL27A1-208ENST00000494780 INAFM1C9JVW0 142 aa20.66■□□□□ 0.9
COL27A1-208ENST00000494780 NPIPB9F8W1W9 429 aa20.66■□□□□ 0.9
COL27A1-208ENST00000494780 P2RY6Q15077 328 aa20.66■□□□□ 0.9
COL27A1-208ENST00000494780 TOMM34Q15785 309 aaPredicted RBP20.66■□□□□ 0.9
COL27A1-208ENST00000494780 SLC25A53Q5H9E4 307 aa20.66■□□□□ 0.9
COL27A1-208ENST00000494780 NCMAPQ5T1S8 102 aa20.66■□□□□ 0.9
COL27A1-208ENST00000494780 LRRN4CLQ8ND94 238 aa20.66■□□□□ 0.9
COL27A1-208ENST00000494780 RAB3IL1Q8TBN0 382 aa20.66■□□□□ 0.9
COL27A1-208ENST00000494780 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.66■□□□□ 0.9
COL27A1-208ENST00000494780 COQ8BQ96D53 544 aa20.66■□□□□ 0.9
COL27A1-208ENST00000494780 PRPF18Q99633 342 aaKnown RBP20.66■□□□□ 0.9
COL27A1-208ENST00000494780 ESRP2Q9H6T0 727 aaKnown RBP20.66■□□□□ 0.9
COL27A1-208ENST00000494780 COQ10BQ9H8M1 238 aa20.66■□□□□ 0.9
COL27A1-208ENST00000494780 LAMP3Q9UQV4 416 aa20.66■□□□□ 0.9
COL27A1-208ENST00000494780 PRR14LQ5THK1 2151 aa20.66■□□□□ 0.9
COL27A1-208ENST00000494780 EIF4E2O60573 245 aaKnown RBP20.65■□□□□ 0.9
COL27A1-208ENST00000494780 NTN1O95631 604 aa20.65■□□□□ 0.9
COL27A1-208ENST00000494780 C6orf47O95873 294 aa20.65■□□□□ 0.9
COL27A1-208ENST00000494780 SERPINB5P36952 375 aa20.65■□□□□ 0.9
COL27A1-208ENST00000494780 RNF144AP50876 292 aaPredicted RBP20.65■□□□□ 0.9
COL27A1-208ENST00000494780 SELENBP1Q13228 472 aa20.65■□□□□ 0.9
COL27A1-208ENST00000494780 TSC22D1Q15714 1073 aa20.65■□□□□ 0.9
COL27A1-208ENST00000494780 TAB1Q15750 504 aa20.65■□□□□ 0.9
COL27A1-208ENST00000494780 C6orf136Q5SQH8 315 aa20.65■□□□□ 0.9
COL27A1-208ENST00000494780 ATP6V1C2Q8NEY4 427 aa20.65■□□□□ 0.9
COL27A1-208ENST00000494780 LILRB1Q8NHL6 650 aaPredicted RBP20.65■□□□□ 0.9
COL27A1-208ENST00000494780 AGR3Q8TD06 166 aa20.65■□□□□ 0.9
COL27A1-208ENST00000494780 KISS1RQ969F8 398 aaPredicted RBP20.65■□□□□ 0.9
COL27A1-208ENST00000494780 C1orf50Q9BV19 199 aa20.65■□□□□ 0.9
COL27A1-208ENST00000494780 MECRQ9BV79 373 aa20.65■□□□□ 0.9
COL27A1-208ENST00000494780 ZANQ9Y493 2812 aa20.64■□□□□ 0.9
COL27A1-208ENST00000494780 TLDC2A0PJX2 215 aa20.64■□□□□ 0.89
COL27A1-208ENST00000494780 ETV2O00321 342 aaPredicted RBP20.64■□□□□ 0.89
COL27A1-208ENST00000494780 SLU7O95391 586 aaKnown RBP20.64■□□□□ 0.89
COL27A1-208ENST00000494780 ADAP00813 363 aa20.64■□□□□ 0.89
COL27A1-208ENST00000494780 CD3EP07766 207 aa20.64■□□□□ 0.89
COL27A1-208ENST00000494780 RAC3P60763 192 aa20.64■□□□□ 0.89
COL27A1-208ENST00000494780 ITGADQ13349 1161 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms