RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 NUDT9Q9BW91 350 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 YIPF2Q9BWQ6 316 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 TRIM2Q9C040 744 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 VN1R1Q9GZP7 353 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 OR52D1Q9H346 318 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 TMEM27Q9HBJ8 222 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 MEPEQ9NQ76 525 aaPredicted RBP9.81□□□□□ -0.84
CLCN6-208ENST00000494028 SLC22A11Q9NSA0 550 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 MED17Q9NVC6 651 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 DIMT1Q9UNQ2 313 aaKnown RBP9.81□□□□□ -0.84
CLCN6-208ENST00000494028 GPR52Q9Y2T5 361 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 MED31Q9Y3C7 131 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 MPDZO75970 2070 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 KMT2EQ8IZD2 1858 aa9.81□□□□□ -0.84
CLCN6-208ENST00000494028 MUC3AQ02505 3323 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 CPED1A4D0V7 1026 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 EFCAB7A8K855 629 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 EFCAB9A8MZ26 197 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 BHLHE40O14503 412 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 POLR1CO15160 346 aaPredicted RBP9.8□□□□□ -0.84
CLCN6-208ENST00000494028 OIP5O43482 229 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 FOXD2O60548 495 aaPredicted RBP9.8□□□□□ -0.84
CLCN6-208ENST00000494028 CNOT3O75175 753 aaKnown RBP9.8□□□□□ -0.84
CLCN6-208ENST00000494028 RFPL3O75679 317 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 TIAF1O95411 115 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 IL33O95760 270 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 CSTAP01040 98 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 CFIP05156 583 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 ENDOUP21128 410 aaKnown RBP9.8□□□□□ -0.84
CLCN6-208ENST00000494028 ALAS2P22557 587 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 RORAP35398 523 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 PPICP45877 212 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 LIMK1P53667 647 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 CCL7P80098 99 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 CD226Q15762 336 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 TSTQ16762 297 aaKnown RBP9.8□□□□□ -0.84
CLCN6-208ENST00000494028 TMEM44Q2T9K0 475 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 VWA2Q5GFL6 755 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 ARMCX4Q5H9R4 360 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 C3orf38Q5JPI3 329 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 RHBDD2Q6NTF9 364 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 C19orf48Q6RUI8 117 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 PAQR6Q6TCH4 344 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 THSD4Q6ZMP0 1018 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 LANCL3Q6ZV70 420 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 TMPRSS11FQ6ZWK6 438 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 ATCAYQ86WG3 371 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 C9orf40Q8IXQ3 194 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 LSMEM1Q8N8F7 131 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 OR2T33Q8NG76 320 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 OR4D9Q8NGE8 314 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 OR52L1Q8NGH7 329 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 OR2I1PQ8NGU4 316 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 OR14A16Q8NHC5 309 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 EDAQ92838 391 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 NAT6Q93015 286 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 ADIPOR1Q96A54 375 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 ART5Q96L15 291 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 CCDC74BQ96LY2 380 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 HS6ST2Q96MM7 605 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 OR8D2Q9GZM6 311 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 UBQLN3Q9H347 655 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 OCEL1Q9H607 264 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 SYNDIG1Q9H7V2 258 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 HHATLQ9HCP6 504 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 FGF20Q9NP95 211 aaPredicted RBP9.8□□□□□ -0.84
CLCN6-208ENST00000494028 MKKSQ9NPJ1 570 aaPredicted RBP9.8□□□□□ -0.84
CLCN6-208ENST00000494028 HINT3Q9NQE9 182 aaKnown RBP9.8□□□□□ -0.84
CLCN6-208ENST00000494028 MRPS18AQ9NVS2 196 aaKnown RBP9.8□□□□□ -0.84
CLCN6-208ENST00000494028 CLEC2DQ9UHP7 191 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 SERTAD3Q9UJW9 196 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 SIGLEC7Q9Y286 467 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 SLC35A3Q9Y2D2 325 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 PMF1-BGLAPU3KQ54 211 aa9.8□□□□□ -0.84
CLCN6-208ENST00000494028 IGLV3-12A0A075B6K2 115 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 IGHV5-10-1A0A0J9YXX1 117 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 IRGMA1A4Y4 181 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 MYL12BO14950 172 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 AIREO43918 545 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 PRKNO60260 465 aaPredicted RBP9.79□□□□□ -0.84
CLCN6-208ENST00000494028 APOL3O95236 402 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 UTS2O95399 124 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 SLC2A10O95528 541 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 CH25HO95992 272 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 HBQ1P09105 142 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 CKMT1AP12532 417 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 HOXD12P35452 270 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 RGS6P49758 472 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 CDH11P55287 796 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 ACY1Q03154 408 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 SKP2Q13309 424 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 MED22Q15528 200 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 KLHL26Q53HC5 615 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 ALG10BQ5I7T1 473 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 RPL13AP3Q6NVV1 102 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 NIPAL3Q6P499 406 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 RABEPKQ7Z6M1 372 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 ZNF440Q8IYI8 595 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 PRSS58Q8IYP2 241 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 SLC34A3Q8N130 599 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms