RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 CD1DP15813 335 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 CSNK1A1P48729 337 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 RAP2BP61225 183 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 LSAMPQ13449 338 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 EIF4HQ15056 248 aaKnown RBP7.42□□□□□ -1.22
BRCA1-221ENST00000493795 IRF4Q15306 451 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 GPR19Q15760 415 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 ZNF805Q5CZA5 627 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 SLC6A19Q695T7 634 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 FCRLBQ6BAA4 426 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 TECPR1Q7Z6L1 1165 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 F2RL3Q96RI0 385 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 NIPSNAP3BQ9BS92 247 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 METTL9Q9H1A3 318 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 ARV1Q9H2C2 271 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 NIPAL2Q9H841 368 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 COQ4Q9Y3A0 265 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 TEX264Q9Y6I9 313 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 TNS2Q63HR2 1409 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 RAD1O60671 282 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 USP2O75604 605 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-221ENST00000493795 FABP1P07148 127 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 ACRP10323 421 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 SSTR2P30874 369 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 PSMB3P49720 205 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 PCBD1P61457 104 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 SRPXP78539 464 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 FLI1Q01543 452 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-221ENST00000493795 NSDHLQ15738 373 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 AAK1Q2M2I8 961 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 SLC10A6Q3KNW5 377 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 ZNF718Q3SXZ3 478 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 PAGE3Q5JUK9 113 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 ENPP6Q6UWR7 440 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 HIST2H3AQ71DI3 136 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 CMTM8Q8IZV2 173 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 SPARTQ8N0X7 666 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 TXNDC5Q8NBS9 432 aaKnown RBP7.42□□□□□ -1.22
BRCA1-221ENST00000493795 B3GNT7Q8NFL0 401 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 OR52N2Q8NGI0 321 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 ADAMTS16Q8TE57 1224 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 AMDHD1Q96NU7 426 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 INTS14Q96SY0 518 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 FEVQ99581 238 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 VSX1Q9NZR4 365 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-221ENST00000493795 CACNG4Q9UBN1 327 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 SUSD2Q9UGT4 822 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 MED16Q9Y2X0 877 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 V9GY05 133 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 UNC13BO14795 1591 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 TET3O43151 1660 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 PRAMEF27A3QJZ7 478 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 BTBD17A6NE02 478 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 SCO1O75880 301 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 GSRP00390 522 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 SMPD1P17405 629 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 CNR1P21554 472 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 IL1R2P27930 398 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 HLA-DMAP28067 261 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 TGFBR3Q03167 851 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 BEX5Q5H9J7 111 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 TCTE1Q5JU00 501 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 PRAMEF9Q5VWM5 478 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 CDHR3Q6ZTQ4 885 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 PLXDC1Q8IUK5 500 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 GLB1L2Q8IW92 636 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 OR52H1Q8NGJ2 320 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 OR8U1Q8NH10 309 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 MUL1Q969V5 352 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 ZNF689Q96CS4 500 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-221ENST00000493795 LPAR4Q99677 370 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 ZNF416Q9BWM5 594 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 DPH1Q9BZG8 443 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 PURGQ9UJV8 347 aaKnown RBP7.42□□□□□ -1.22
BRCA1-221ENST00000493795 ADAMTS6Q9UKP5 1117 aa7.42□□□□□ -1.22
BRCA1-221ENST00000493795 YTHDF2Q9Y5A9 579 aaKnown RBP7.42□□□□□ -1.22
BRCA1-221ENST00000493795 FEZF1A0PJY2 475 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 MROH6A6NGR9 719 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 FAM171A2A8MVW0 826 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 LEFTY2O00292 366 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 EIF3FO00303 357 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-221ENST00000493795 GPR39O43194 453 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 INHAP05111 366 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 IL3RAP26951 378 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 HOXA11P31270 313 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-221ENST00000493795 KCNQ1P51787 676 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 PTTG1IPP53801 180 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 SLC7A9P82251 487 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 SLC9A3R2Q15599 337 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 C3orf38Q5JPI3 329 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 CTSL3PQ5NE16 218 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 SLC7A5P1Q8MH63 180 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 NHLRC2Q8NBF2 726 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 DBF4BQ8NFT6 615 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 ABHD11Q8NFV4 315 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 CMASQ8NFW8 434 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-221ENST00000493795 RHEBL1Q8TAI7 183 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 ZMYND19Q96E35 227 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-221ENST00000493795 PEX11GQ96HA9 241 aa7.41□□□□□ -1.22
BRCA1-221ENST00000493795 DPH7Q9BTV6 452 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms