RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 LRRC3CA6NJW4 275 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 SNPHO15079 494 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 RASAL1O95294 804 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 KCNJ5P48544 419 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 HOXC5Q00444 222 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 PLAURQ03405 335 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 SKP2Q13309 424 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 FXNQ16595 210 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 RNF220Q5VTB9 566 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 TIGD3Q6B0B8 471 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 FKBP9P1Q75LS8 142 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 VTCN1Q7Z7D3 282 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 MISPQ8IVT2 679 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 CMIPQ8IY22 773 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 BHLHE22Q8NFJ8 381 aaPredicted RBP15.66■□□□□ 0.1
LIME1-208ENST00000493265 RASSF5Q8WWW0 418 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 OIT3Q8WWZ8 545 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 LZICQ8WZA0 190 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 PROX1Q92786 737 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 HSH2DQ96JZ2 352 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 KLHDC3Q9BQ90 382 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 MUC13Q9H3R2 512 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 GORASP2Q9H8Y8 452 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 ZFP64Q9NPA5 681 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 KLHL28Q9NXS3 571 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 DNAJB12Q9NXW2 375 aaKnown RBP15.66■□□□□ 0.1
LIME1-208ENST00000493265 RPS6KA6Q9UK32 745 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 FBXL2Q9UKC9 423 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 BAG5Q9UL15 447 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 SH3GLB1Q9Y371 365 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 CHST2Q9Y4C5 530 aa15.66■□□□□ 0.1
LIME1-208ENST00000493265 B4DXG7 233 aa15.65■□□□□ 0.1
LIME1-208ENST00000493265 M0R3H8 397 aa15.65■□□□□ 0.1
LIME1-208ENST00000493265 ACOT8O14734 319 aa15.65■□□□□ 0.1
LIME1-208ENST00000493265 RRP9O43818 475 aaKnown RBP15.65■□□□□ 0.1
LIME1-208ENST00000493265 PRKD3O94806 890 aa15.65■□□□□ 0.1
LIME1-208ENST00000493265 EPPINO95925 133 aa15.65■□□□□ 0.1
LIME1-208ENST00000493265 FESP07332 822 aa15.65■□□□□ 0.1
LIME1-208ENST00000493265 RFPL3SP0C7P2 107 aa15.65■□□□□ 0.1
LIME1-208ENST00000493265 GP1BBP13224 206 aa15.65■□□□□ 0.1
LIME1-208ENST00000493265 PRG2P13727 222 aa15.65■□□□□ 0.1
LIME1-208ENST00000493265 ENDOUP21128 410 aaKnown RBP15.65■□□□□ 0.1
LIME1-208ENST00000493265 GDF1P27539 372 aa15.65■□□□□ 0.1
LIME1-208ENST00000493265 ADH7P40394 386 aa15.65■□□□□ 0.1
LIME1-208ENST00000493265 OR1E2P47887 323 aa15.65■□□□□ 0.1
LIME1-208ENST00000493265 SELENOWP63302 87 aa15.65■□□□□ 0.1
LIME1-208ENST00000493265 FOXO1Q12778 655 aa15.65■□□□□ 0.1
LIME1-208ENST00000493265 TRAP1Q12931 704 aaKnown RBP15.65■□□□□ 0.1
LIME1-208ENST00000493265 C1orf146Q5VVC0 180 aa15.65■□□□□ 0.1
LIME1-208ENST00000493265 ENPP6Q6UWR7 440 aa15.65■□□□□ 0.1
LIME1-208ENST00000493265 CBLL1Q75N03 491 aa15.65■□□□□ 0.1
LIME1-208ENST00000493265 LURAP1LQ8IV03 231 aa15.65■□□□□ 0.1
LIME1-208ENST00000493265 FAM86B1Q8N7N1 296 aa15.65■□□□□ 0.1
LIME1-208ENST00000493265 OR2M3Q8NG83 312 aa15.65■□□□□ 0.1
LIME1-208ENST00000493265 PNPLA2Q96AD5 504 aa15.65■□□□□ 0.1
LIME1-208ENST00000493265 RAB3IPQ96QF0 476 aaPredicted RBP15.65■□□□□ 0.1
LIME1-208ENST00000493265 TTTY12Q9BZ98 90 aa15.65■□□□□ 0.1
LIME1-208ENST00000493265 TRIM15Q9C019 465 aa15.65■□□□□ 0.1
LIME1-208ENST00000493265 LAT2Q9GZY6 243 aa15.65■□□□□ 0.1
LIME1-208ENST00000493265 DCAF13Q9NV06 445 aaKnown RBP15.65■□□□□ 0.1
LIME1-208ENST00000493265 PCDHGB6Q9Y5F9 930 aa15.65■□□□□ 0.1
LIME1-208ENST00000493265 UTP20O75691 2785 aaKnown RBP15.65■□□□□ 0.1
LIME1-208ENST00000493265 USP9YO00507 2555 aaPredicted RBP15.64■□□□□ 0.09
LIME1-208ENST00000493265 AP3D1O14617 1153 aa15.64■□□□□ 0.09
LIME1-208ENST00000493265 EIF4E2O60573 245 aaKnown RBP15.64■□□□□ 0.09
LIME1-208ENST00000493265 TRAPPC6AO75865 159 aa15.64■□□□□ 0.09
LIME1-208ENST00000493265 NQO1P15559 274 aaKnown RBP15.64■□□□□ 0.09
LIME1-208ENST00000493265 P2RX1P51575 399 aa15.64■□□□□ 0.09
LIME1-208ENST00000493265 RGS8P57771 180 aaPredicted RBP15.64■□□□□ 0.09
LIME1-208ENST00000493265 PPIAP62937 165 aaKnown RBP15.64■□□□□ 0.09
LIME1-208ENST00000493265 KLRB1Q12918 225 aa15.64■□□□□ 0.09
LIME1-208ENST00000493265 LCN8Q6JVE9 175 aa15.64■□□□□ 0.09
LIME1-208ENST00000493265 SPATA24Q86W54 205 aa15.64■□□□□ 0.09
LIME1-208ENST00000493265 LACC1Q8IV20 430 aa15.64■□□□□ 0.09
LIME1-208ENST00000493265 TOR1AIP2Q8NFQ8 470 aa15.64■□□□□ 0.09
LIME1-208ENST00000493265 NTNG2Q96CW9 530 aa15.64■□□□□ 0.09
LIME1-208ENST00000493265 RNF145Q96MT1 663 aa15.64■□□□□ 0.09
LIME1-208ENST00000493265 FRMD6Q96NE9 622 aa15.64■□□□□ 0.09
LIME1-208ENST00000493265 SEPHS2Q99611 448 aa15.64■□□□□ 0.09
LIME1-208ENST00000493265 WFDC6Q9BQY6 131 aa15.64■□□□□ 0.09
LIME1-208ENST00000493265 PRR14Q9BWN1 585 aa15.64■□□□□ 0.09
LIME1-208ENST00000493265 TSPAN10Q9H1Z9 355 aaPredicted RBP15.64■□□□□ 0.09
LIME1-208ENST00000493265 PTGES2Q9H7Z7 377 aa15.64■□□□□ 0.09
LIME1-208ENST00000493265 B4GALT7Q9UBV7 327 aa15.64■□□□□ 0.09
LIME1-208ENST00000493265 DKKL1Q9UK85 242 aa15.64■□□□□ 0.09
LIME1-208ENST00000493265 SAMD4AQ9UPU9 718 aaKnown RBP15.64■□□□□ 0.09
LIME1-208ENST00000493265 VDAC3Q9Y277 283 aa15.64■□□□□ 0.09
LIME1-208ENST00000493265 C15orf41Q9Y2V0 281 aa15.64■□□□□ 0.09
LIME1-208ENST00000493265 NINQ8N4C6 2090 aa15.64■□□□□ 0.09
LIME1-208ENST00000493265 CLEC18AA5D8T8 446 aa15.63■□□□□ 0.09
LIME1-208ENST00000493265 CFAP73A6NFT4 308 aa15.63■□□□□ 0.09
LIME1-208ENST00000493265 TMEM229AB2RXF0 380 aa15.63■□□□□ 0.09
LIME1-208ENST00000493265 ACOT7O00154 380 aa15.63■□□□□ 0.09
LIME1-208ENST00000493265 CBR3O75828 277 aa15.63■□□□□ 0.09
LIME1-208ENST00000493265 LGI1O95970 557 aa15.63■□□□□ 0.09
LIME1-208ENST00000493265 LINGO3P0C6S8 592 aa15.63■□□□□ 0.09
LIME1-208ENST00000493265 ELAVL4P26378 380 aaKnown RBP15.63■□□□□ 0.09
LIME1-208ENST00000493265 MSX1P28360 303 aa15.63■□□□□ 0.09
LIME1-208ENST00000493265 MAGEA5P43359 124 aa15.63■□□□□ 0.09
LIME1-208ENST00000493265 ZSWIM7Q19AV6 140 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms