RNA–Protein interactions for RNA: ENST00000492234.5

AGAP3-223, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-223	ENST00000492234	CHERP	Q8IWX8	916 aa	Known RBP	11.92	□□□□□ -0.5
AGAP3-223	ENST00000492234	CMIP	Q8IY22	773 aa		11.92	□□□□□ -0.5
AGAP3-223	ENST00000492234	ZZZ3	Q8IYH5	903 aa		11.92	□□□□□ -0.5
AGAP3-223	ENST00000492234	ZNF563	Q8TA94	476 aa		11.92	□□□□□ -0.5
AGAP3-223	ENST00000492234	GPR119	Q8TDV5	335 aa		11.92	□□□□□ -0.5
AGAP3-223	ENST00000492234	CNOT9	Q92600	299 aa	Known RBP	11.92	□□□□□ -0.5
AGAP3-223	ENST00000492234	ARSG	Q96EG1	525 aa		11.92	□□□□□ -0.5
AGAP3-223	ENST00000492234	NSL1	Q96IY1	281 aa		11.92	□□□□□ -0.5
AGAP3-223	ENST00000492234	TIMP4	Q99727	224 aa		11.92	□□□□□ -0.5
AGAP3-223	ENST00000492234	KLHDC3	Q9BQ90	382 aa		11.92	□□□□□ -0.5
AGAP3-223	ENST00000492234	PIGQ	Q9BRB3	760 aa		11.92	□□□□□ -0.5
AGAP3-223	ENST00000492234	SPATA5L1	Q9BVQ7	753 aa		11.92	□□□□□ -0.5
AGAP3-223	ENST00000492234	UGT2B28	Q9BY64	529 aa		11.92	□□□□□ -0.5
AGAP3-223	ENST00000492234	PNPLA3	Q9NST1	481 aa		11.92	□□□□□ -0.5
AGAP3-223	ENST00000492234	RLIM	Q9NVW2	624 aa		11.92	□□□□□ -0.5
AGAP3-223	ENST00000492234	ICAM5	Q9UMF0	924 aa		11.92	□□□□□ -0.5
AGAP3-223	ENST00000492234	ZNF443	Q9Y2A4	671 aa	Predicted RBP	11.92	□□□□□ -0.5
AGAP3-223	ENST00000492234	AP3M1	Q9Y2T2	418 aa		11.92	□□□□□ -0.5
AGAP3-223	ENST00000492234	DIDO1	Q9BTC0	2240 aa	Known RBP	11.92	□□□□□ -0.5
AGAP3-223	ENST00000492234		A0A1B0GUH1	482 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	CCT8L1P	A6NM43	557 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234		H3BML4	177 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	LRRTM2	O43300	516 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	BCAS1	O75363	584 aa	Predicted RBP	11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	ACTL6A	O96019	429 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	STS	P08842	583 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	LINGO3	P0C6S8	592 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	PABPC4L	P0CB38	370 aa	Known RBP	11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	ETS2	P15036	469 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	PGC	P20142	388 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	CHM	P24386	653 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	GZMM	P51124	257 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	SLC7A2	P52569	658 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	SUMO3	P55854	103 aa	Predicted RBP	11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	PSME3	P61289	254 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	CRYZ	Q08257	329 aa	Known RBP	11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	SKP2	Q13309	424 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	KRT72	Q14CN4	511 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	TOMM34	Q15785	309 aa	Predicted RBP	11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	VMAC	Q2NL98	169 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	PLPPR5	Q32ZL2	321 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	VASN	Q6EMK4	673 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	HACD2	Q6Y1H2	254 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	ZNF836	Q6ZNA1	936 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	NET1	Q7Z628	596 aa	Predicted RBP	11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	SLC30A8	Q8IWU4	369 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	SLC15A3	Q8IY34	581 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	CLIP4	Q8N3C7	705 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	SLC26A7	Q8TE54	656 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	SMPDL3B	Q92485	455 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	ZNF583	Q96ND8	569 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	GPATCH1	Q9BRR8	931 aa	Known RBP	11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	SPATA9	Q9BWV2	254 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	CMTM6	Q9NX76	183 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	ADA2	Q9NZK5	511 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	STOML1	Q9UBI4	398 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	ZNF337	Q9Y3M9	751 aa		11.91	□□□□□ -0.5
AGAP3-223	ENST00000492234	DSPP	Q9NZW4	1301 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	FASN	P49327	2511 aa	Known RBP	11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	OR2M5	A3KFT3	312 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234		M0QX08	132 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	GSTA4	O15217	222 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	OPN1LW	P04000	364 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	THBS1	P07996	1170 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	GKN3P	P0CG01	181 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	PEPD	P12955	493 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	POU3F2	P20265	443 aa	Predicted RBP	11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	PCGF2	P35227	344 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	CA7	P43166	264 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	SLC6A8	P48029	635 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	MNAT1	P51948	309 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	GFRA1	P56159	465 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	B3GALT5-AS1	P59052	145 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	EEF1A1	P68104	462 aa	Known RBP	11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	QPRT	Q15274	297 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	C4orf17	Q53FE4	359 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	NHSL2	Q5HYW2	709 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	DCST1	Q5T197	706 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	INTS11	Q5TA45	600 aa	Known RBP	11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	FAM91A1	Q658Y4	838 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	ERICH5	Q6P6B1	374 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	CHMP1B	Q7LBR1	199 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	CALHM3	Q86XJ0	350 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	ARMC8	Q8IUR7	673 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	PM20D2	Q8IYS1	436 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	UBQLNL	Q8IYU4	475 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	EID3	Q8N140	333 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	ATP6V1C2	Q8NEY4	427 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	OR2T12	Q8NG77	320 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	FBXO27	Q8NI29	283 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	ZBTB8A	Q96BR9	441 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	WDYHV1	Q96HA8	205 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	REXO5	Q96IC2	774 aa	Known RBP	11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	RNF145	Q96MT1	663 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	PCNX1	Q96RV3	2341 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	NPAS1	Q99742	590 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	TP63	Q9H3D4	680 aa	Predicted RBP	11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	DNAJB12	Q9NXW2	375 aa	Known RBP	11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	SLC13A4	Q9UKG4	626 aa		11.9	□□□□□ -0.5
AGAP3-223	ENST00000492234	USP22	Q9UPT9	525 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms