RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 CALHM2Q9HA72 323 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 FANCFQ9NPI8 374 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 SLC35D1Q9NTN3 355 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 RIMS3Q9UJD0 308 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 CELA1Q9UNI1 258 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 USP16Q9Y5T5 823 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 A0A0C4DFX4 3053 aa2.79□□□□□ -1.96
VTA1-204ENST00000491881 PCF11O94913 1555 aaKnown RBP2.78□□□□□ -1.96
VTA1-204ENST00000491881 LOC100131303A0A0U1RQF7 123 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.78□□□□□ -1.96
VTA1-204ENST00000491881 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.78□□□□□ -1.96
VTA1-204ENST00000491881 ESYT2A0FGR8 921 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 UFL1O94874 794 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 F10P00742 488 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 IGF1P05019 195 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 PCCBP05166 539 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 OR8U8P0C7N1 319 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 KRT13P13646 458 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 GCFC2P16383 781 aaKnown RBP2.78□□□□□ -1.96
VTA1-204ENST00000491881 ZNF19P17023 458 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 ACAA2P42765 397 aaKnown RBP2.78□□□□□ -1.96
VTA1-204ENST00000491881 C1QTNF8P60827 252 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 EWSR1Q01844 656 aaKnown RBP eCLIP2.78□□□□□ -1.96
VTA1-204ENST00000491881 RAB40BQ12829 278 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 LAGE3Q14657 143 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 LRRC36Q1X8D7 754 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 LIPNQ5VXI9 398 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 SCARA5Q6ZMJ2 495 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 DNM1P46Q6ZS02 220 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 C16orf62Q7Z3J2 963 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 HSD17B13Q7Z5P4 300 aaPredicted RBP2.78□□□□□ -1.96
VTA1-204ENST00000491881 DENND6BQ8NEG7 585 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 LINC01006Q8NI28 216 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 UBE2Q2Q8WVN8 375 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 MARC2Q969Z3 335 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 SYAP1Q96A49 352 aaPredicted RBP2.78□□□□□ -1.96
VTA1-204ENST00000491881 C16orf74Q96GX8 76 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 SMIM14Q96QK8 99 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 IL4I1Q96RQ9 567 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 CYP2S1Q96SQ9 504 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 RIBC2Q9H4K1 309 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 PDFQ9HBH1 243 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 AIPL1Q9NZN9 384 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 ADAM22Q9P0K1 906 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 LAMP5Q9UJQ1 280 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 GSTK1Q9Y2Q3 226 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 PLLPQ9Y342 182 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 WDR45Q9Y484 360 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 ALG6Q9Y672 507 aa2.78□□□□□ -1.96
VTA1-204ENST00000491881 KIF13AQ9H1H9 1805 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 AGRNO00468 2067 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 IGHV7-81A0A0B4J1V7 117 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 TM7SF2O76062 418 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 B3GAT3O94766 335 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 SEMG1P04279 462 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 DUX4L4P0CJ87 422 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 TSPY4P0CV99 314 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 TSPY10P0CW01 314 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 CD1EP15812 388 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 TBXA2RP21731 343 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 NMT1P30419 496 aaKnown RBP2.77□□□□□ -1.97
VTA1-204ENST00000491881 PLA2G16P53816 162 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 RIPPLY3P57055 190 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 PJVKQ0ZLH3 352 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 AANATQ16613 207 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 SLC5A12Q1EHB4 618 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 SLC36A3Q495N2 470 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 RABGAP1LQ5R372 815 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 NCR3LG1Q68D85 454 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 ACOT1Q86TX2 421 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 ZNF589Q86UQ0 364 aaPredicted RBP2.77□□□□□ -1.97
VTA1-204ENST00000491881 PPP1R27Q86WC6 154 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 GRAMD2AQ8IUY3 354 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 SKA3Q8IX90 412 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 CEND1Q8N111 149 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 C15orf54Q8N8G6 183 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 STXBP6Q8NFX7 210 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 OR9A1PQ8NGU1 263 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 PNPT1Q8TCS8 783 aaKnown RBP2.77□□□□□ -1.97
VTA1-204ENST00000491881 RAET1EQ8TD07 263 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 SETD7Q8WTS6 366 aaKnown RBP2.77□□□□□ -1.97
VTA1-204ENST00000491881 THRSPQ92748 146 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 ZNF184Q99676 751 aaPredicted RBP2.77□□□□□ -1.97
VTA1-204ENST00000491881 MCHR1Q99705 422 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 CITED1Q99966 193 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 NICN1Q9BSH3 213 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 NXF5Q9H1B4 397 aaKnown RBP2.77□□□□□ -1.97
VTA1-204ENST00000491881 ONECUT1Q9UBC0 465 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 GNG12Q9UBI6 72 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 OR10H1Q9Y4A9 318 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 ZNF318Q5VUA4 2279 aa2.77□□□□□ -1.97
VTA1-204ENST00000491881 UTRNP46939 3433 aa2.76□□□□□ -1.97
VTA1-204ENST00000491881 A0A1B0GWJ7 208 aa2.76□□□□□ -1.97
VTA1-204ENST00000491881 TUBAL3A6NHL2 446 aa2.76□□□□□ -1.97
VTA1-204ENST00000491881 PP2D1A8MPX8 630 aa2.76□□□□□ -1.97
VTA1-204ENST00000491881 PPIAL4DF5H284 164 aa2.76□□□□□ -1.97
VTA1-204ENST00000491881 MSH4O15457 936 aa2.76□□□□□ -1.97
VTA1-204ENST00000491881 ZSCAN12O43309 604 aa2.76□□□□□ -1.97
VTA1-204ENST00000491881 TPST2O60704 377 aa2.76□□□□□ -1.97
VTA1-204ENST00000491881 PEX11AO75192 247 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms