RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 ZC3HAV1LQ96H79 300 aaKnown RBP7.4□□□□□ -1.22
LSM2-213ENST00000491421 REXO5Q96IC2 774 aaKnown RBP7.4□□□□□ -1.22
LSM2-213ENST00000491421 KLHL15Q96M94 604 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 DPY30Q9C005 99 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 KLHL4Q9C0H6 718 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 C20orf27Q9GZN8 174 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 KCNK9Q9NPC2 374 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 TIGARQ9NQ88 270 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 PLSCR4Q9NRQ2 329 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 GLRX2Q9NS18 164 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 ICAM5Q9UMF0 924 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 PCDHGB4Q9UN71 923 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.4□□□□□ -1.22
LSM2-213ENST00000491421 DTNAQ9Y4J8 743 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 ACTL7BQ9Y614 415 aa7.4□□□□□ -1.22
LSM2-213ENST00000491421 GPC6Q9Y625 555 aaPredicted RBP7.4□□□□□ -1.22
LSM2-213ENST00000491421 AKAP6Q13023 2319 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 DOCK7Q96N67 2140 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 DUXAA6NLW8 204 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 GJE1A6NN92 205 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 DEFB108AA8MXU0 73 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 ZNF195O14628 629 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 SIAH2O43255 324 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 ZNF264O43296 627 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 EIF4E2O60573 245 aaKnown RBP7.39□□□□□ -1.23
LSM2-213ENST00000491421 STX11O75558 287 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 AK1P00568 194 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 TUBBP07437 444 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 PABPC4LP0CB38 370 aaKnown RBP7.39□□□□□ -1.23
LSM2-213ENST00000491421 UBL4AP11441 157 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 LBPP18428 481 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 CD53P19397 219 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 MATN1P21941 496 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 CRYGSP22914 178 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 ADH6P28332 368 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 SHC1P29353 583 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 CCR4P51679 360 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 CLNS1AP54105 237 aaKnown RBP7.39□□□□□ -1.23
LSM2-213ENST00000491421 FOXD4Q12950 439 aaPredicted RBP7.39□□□□□ -1.23
LSM2-213ENST00000491421 STX3Q13277 289 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 MPP2Q14168 576 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 GPR68Q15743 365 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 TOMM34Q15785 309 aaPredicted RBP7.39□□□□□ -1.23
LSM2-213ENST00000491421 ZNF239Q16600 458 aaKnown RBP7.39□□□□□ -1.23
LSM2-213ENST00000491421 PDZK1Q5T2W1 519 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 ANXA8L1Q5VT79 327 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 ANKRD34AQ69YU3 496 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 GTF2IRD2BQ6EKJ0 949 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 C16orf62Q7Z3J2 963 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 C6orf120Q7Z4R8 191 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 CROCCP2Q86T23 111 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 GTF2IRD2Q86UP8 949 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 STK32CQ86UX6 486 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 ANKRD42Q8N9B4 389 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 ATP6V1C2Q8NEY4 427 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 VPS37AQ8NEZ2 397 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 TOR1AIP2Q8NFQ8 470 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 OR8J2Q8NGG1 315 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 RFWD2Q8NHY2 731 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 GPR119Q8TDV5 335 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 CPNE4Q96A23 557 aaPredicted RBP7.39□□□□□ -1.23
LSM2-213ENST00000491421 SLC35G5Q96KT7 338 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 MRGPRX4Q96LA9 322 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 SDF2Q99470 211 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 SORT1Q99523 831 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 PAIP2Q9BPZ3 127 aaKnown RBP7.39□□□□□ -1.23
LSM2-213ENST00000491421 NUF2Q9BZD4 464 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 NMUR2Q9GZQ4 415 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 SERHL2Q9H4I8 314 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 FANCFQ9NPI8 374 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 EXD2Q9NVH0 621 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 BEX4Q9NWD9 120 aaPredicted RBP7.39□□□□□ -1.23
LSM2-213ENST00000491421 HAO1Q9UJM8 370 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 RAB21Q9UL25 225 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 C2CD3Q4AC94 2353 aa7.39□□□□□ -1.23
LSM2-213ENST00000491421 PRSS51A0A1B0GVH4 220 aa7.38□□□□□ -1.23
LSM2-213ENST00000491421 SERINC4A6NH21 518 aa7.38□□□□□ -1.23
LSM2-213ENST00000491421 EFNA2O43921 213 aa7.38□□□□□ -1.23
LSM2-213ENST00000491421 FCMRO60667 390 aa7.38□□□□□ -1.23
LSM2-213ENST00000491421 DIAPH2O60879 1101 aa7.38□□□□□ -1.23
LSM2-213ENST00000491421 CYP7B1O75881 506 aa7.38□□□□□ -1.23
LSM2-213ENST00000491421 CPSF4O95639 269 aaKnown RBP7.38□□□□□ -1.23
LSM2-213ENST00000491421 AGR2O95994 175 aa7.38□□□□□ -1.23
LSM2-213ENST00000491421 PPP3CBP16298 524 aa7.38□□□□□ -1.23
LSM2-213ENST00000491421 PRKCAP17252 672 aa7.38□□□□□ -1.23
LSM2-213ENST00000491421 UQCRC2P22695 453 aa7.38□□□□□ -1.23
LSM2-213ENST00000491421 AGTR1P30556 359 aa7.38□□□□□ -1.23
LSM2-213ENST00000491421 SLC7A1P30825 629 aa7.38□□□□□ -1.23
LSM2-213ENST00000491421 CHI3L1P36222 383 aaPredicted RBP7.38□□□□□ -1.23
LSM2-213ENST00000491421 CASP9P55211 416 aa7.38□□□□□ -1.23
LSM2-213ENST00000491421 ADAM8P78325 824 aa7.38□□□□□ -1.23
LSM2-213ENST00000491421 BST1Q10588 318 aa7.38□□□□□ -1.23
LSM2-213ENST00000491421 SELENBP1Q13228 472 aa7.38□□□□□ -1.23
LSM2-213ENST00000491421 SKP2Q13309 424 aa7.38□□□□□ -1.23
LSM2-213ENST00000491421 CBFBQ13951 182 aa7.38□□□□□ -1.23
LSM2-213ENST00000491421 QPRTQ15274 297 aa7.38□□□□□ -1.23
LSM2-213ENST00000491421 RNPS1Q15287 305 aaKnown RBP7.38□□□□□ -1.23
LSM2-213ENST00000491421 ZNF141Q15928 474 aa7.38□□□□□ -1.23
LSM2-213ENST00000491421 DPY19L1Q2PZI1 675 aa7.38□□□□□ -1.23
LSM2-213ENST00000491421 ARHGAP11BQ3KRB8 267 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms