RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 MEAF6Q9HAF1 191 aa16.11■□□□□ 0.17
HMGN1-219ENST00000491183 C6orf203Q9P0P8 240 aaPredicted RBP16.11■□□□□ 0.17
HMGN1-219ENST00000491183 MCTS1Q9ULC4 181 aaKnown RBP16.11■□□□□ 0.17
HMGN1-219ENST00000491183 CENPVL1A0A0U1RR11 272 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 PRSS51A0A1B0GVH4 220 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 DUXAA6NLW8 204 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 DEFB108AA8MXU0 73 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 ESPNB1AK53 854 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 C16orf97H3BN30 126 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 H3BNH8 94 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 ZNF195O14628 629 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 SYNGR4O95473 234 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 NTN1O95631 604 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 CPSF4O95639 269 aaKnown RBP16.1■□□□□ 0.17
HMGN1-219ENST00000491183 NUDT14O95848 222 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 C1QCP02747 245 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 TUBBP07437 444 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 PRKCAP17252 672 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 ME2P23368 584 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 ADH6P28332 368 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 SFTPDP35247 375 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 KCNJ5P48544 419 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 SUMO3P55854 103 aaPredicted RBP16.1■□□□□ 0.17
HMGN1-219ENST00000491183 CARD18P57730 90 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 ARHGAP11BQ3KRB8 267 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 PDZK1Q5T2W1 519 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 ZNF550Q7Z398 422 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 CROCCP2Q86T23 111 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 LRRC34Q8IZ02 419 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 ZNF614Q8N883 585 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 ANKRD42Q8N9B4 389 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 OR6K3Q8NGY3 331 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 MIPOL1Q8TD10 442 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 ROBO4Q8WZ75 1007 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 TESCQ96BS2 214 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 SLC35G5Q96KT7 338 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 TEX37Q96LM6 180 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 OR51I1Q9H343 314 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 PCDHGB4Q9UN71 923 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 EMC9Q9Y3B6 208 aa16.1■□□□□ 0.17
HMGN1-219ENST00000491183 SERINC4A6NH21 518 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 SDHDO14521 159 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 ZNF264O43296 627 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 PLGP00747 810 aaPredicted RBP16.09■□□□□ 0.17
HMGN1-219ENST00000491183 ALDOCP09972 364 aaKnown RBP16.09■□□□□ 0.17
HMGN1-219ENST00000491183 KEAP1Q14145 624 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 CASP8Q14790 479 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 GPR68Q15743 365 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 ZNF141Q15928 474 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 EXOC3L2Q2M3D2 409 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 DEFB113Q30KQ7 82 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 SLC25A53Q5H9E4 307 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 SPANXN4Q5MJ08 99 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 PDSS1Q5T2R2 415 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 ANXA8L1Q5VT79 327 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 ANKRD34AQ69YU3 496 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 HEPHL1Q6MZM0 1159 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 TGIF2LYQ8IUE0 185 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 KIRREL3Q8IZU9 778 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 RFWD2Q8NHY2 731 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 ARSGQ96EG1 525 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 MARK4Q96L34 752 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 ALPK1Q96QP1 1244 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 MED18Q9BUE0 208 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 SRXN1Q9BYN0 137 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 KLHL4Q9C0H6 718 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 NMUR2Q9GZQ4 415 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 MKLN1Q9UL63 735 aa16.09■□□□□ 0.17
HMGN1-219ENST00000491183 GPC6Q9Y625 555 aaPredicted RBP16.09■□□□□ 0.17
HMGN1-219ENST00000491183 TMEM120BA0PK00 339 aa16.08■□□□□ 0.16
HMGN1-219ENST00000491183 EIF4E2O60573 245 aaKnown RBP16.08■□□□□ 0.16
HMGN1-219ENST00000491183 STX11O75558 287 aa16.08■□□□□ 0.16
HMGN1-219ENST00000491183 UGT2B17O75795 530 aa16.08■□□□□ 0.16
HMGN1-219ENST00000491183 AK1P00568 194 aa16.08■□□□□ 0.16
HMGN1-219ENST00000491183 OR12D1P0DN82 309 aa16.08■□□□□ 0.16
HMGN1-219ENST00000491183 UBL4AP11441 157 aa16.08■□□□□ 0.16
HMGN1-219ENST00000491183 CD99P14209 185 aa16.08■□□□□ 0.16
HMGN1-219ENST00000491183 CD53P19397 219 aa16.08■□□□□ 0.16
HMGN1-219ENST00000491183 UQCRC2P22695 453 aa16.08■□□□□ 0.16
HMGN1-219ENST00000491183 CRYGSP22914 178 aa16.08■□□□□ 0.16
HMGN1-219ENST00000491183 ELK4P28324 431 aa16.08■□□□□ 0.16
HMGN1-219ENST00000491183 CTBP2P56545 445 aa16.08■□□□□ 0.16
HMGN1-219ENST00000491183 UFM1P61960 85 aa16.08■□□□□ 0.16
HMGN1-219ENST00000491183 TMEM176BQ3YBM2 270 aaPredicted RBP16.08■□□□□ 0.16
HMGN1-219ENST00000491183 HHATQ5VTY9 493 aa16.08■□□□□ 0.16
HMGN1-219ENST00000491183 SAXO2Q658L1 398 aa16.08■□□□□ 0.16
HMGN1-219ENST00000491183 OGFOD2Q6N063 350 aa16.08■□□□□ 0.16
HMGN1-219ENST00000491183 OR5W2Q8NH69 310 aa16.08■□□□□ 0.16
HMGN1-219ENST00000491183 XAGE5Q8WWM1 108 aa16.08■□□□□ 0.16
HMGN1-219ENST00000491183 RAB8BQ92930 207 aa16.08■□□□□ 0.16
HMGN1-219ENST00000491183 MRGPRX4Q96LA9 322 aa16.08■□□□□ 0.16
HMGN1-219ENST00000491183 ZNF350Q9GZX5 532 aa16.08■□□□□ 0.16
HMGN1-219ENST00000491183 GLRX2Q9NS18 164 aa16.08■□□□□ 0.16
HMGN1-219ENST00000491183 ZNF226Q9NYT6 803 aa16.08■□□□□ 0.16
HMGN1-219ENST00000491183 ETV2O00321 342 aaPredicted RBP16.07■□□□□ 0.16
HMGN1-219ENST00000491183 DNAJA2O60884 412 aa16.07■□□□□ 0.16
HMGN1-219ENST00000491183 KLK2P20151 261 aa16.07■□□□□ 0.16
HMGN1-219ENST00000491183 IL12AP29459 219 aa16.07■□□□□ 0.16
HMGN1-219ENST00000491183 S100A3P33764 101 aa16.07■□□□□ 0.16
HMGN1-219ENST00000491183 NME5P56597 212 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms