RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 ZNF528Q3MIS6 628 aa9.51□□□□□ -0.89
BRD9-209ENST00000490814 PRAMEF14Q5SWL7 426 aa9.51□□□□□ -0.89
BRD9-209ENST00000490814 PRAMEF13Q5VWM6 474 aa9.51□□□□□ -0.89
BRD9-209ENST00000490814 FAM71E1Q6IPT2 247 aa9.51□□□□□ -0.89
BRD9-209ENST00000490814 NXPE4Q6UWF7 544 aa9.51□□□□□ -0.89
BRD9-209ENST00000490814 RBMS3Q6XE24 437 aaKnown RBP9.51□□□□□ -0.89
BRD9-209ENST00000490814 TRAM1L1Q8N609 369 aa9.51□□□□□ -0.89
BRD9-209ENST00000490814 FAM181AQ8N9Y4 354 aa9.51□□□□□ -0.89
BRD9-209ENST00000490814 OR9A1PQ8NGU1 263 aa9.51□□□□□ -0.89
BRD9-209ENST00000490814 KIAA1143Q96AT1 154 aaPredicted RBP9.51□□□□□ -0.89
BRD9-209ENST00000490814 PRAP1Q96NZ9 151 aa9.51□□□□□ -0.89
BRD9-209ENST00000490814 TBX5Q99593 518 aa9.51□□□□□ -0.89
BRD9-209ENST00000490814 ANKRD19PQ9H560 264 aa9.51□□□□□ -0.89
BRD9-209ENST00000490814 PPP1R3EQ9H7J1 279 aa9.51□□□□□ -0.89
BRD9-209ENST00000490814 CDH10Q9Y6N8 788 aa9.51□□□□□ -0.89
BRD9-209ENST00000490814 PLXNA4Q9HCM2 1894 aa9.51□□□□□ -0.89
BRD9-209ENST00000490814 LY86O95711 162 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 LATS1O95835 1130 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 LGI1O95970 557 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 C8AP07357 584 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 C8orf89P0DMQ9 161 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 PSMB5P28074 263 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 SRP9P49458 86 aaKnown RBP9.5□□□□□ -0.89
BRD9-209ENST00000490814 LGALSLQ3ZCW2 172 aaPredicted RBP9.5□□□□□ -0.89
BRD9-209ENST00000490814 ACSM5Q6NUN0 579 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 RTL10Q7L3V2 364 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 GPR32P1Q8NGA4 272 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 OR5AR1Q8NGP9 310 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 RNFT2Q96EX2 444 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 LURAP1Q96LR2 239 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 C12orf66Q96MD2 445 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 SLC6A18Q96N87 628 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 SSX3Q99909 188 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 NKX6-2Q9C056 277 aaPredicted RBP9.5□□□□□ -0.89
BRD9-209ENST00000490814 PTTG3PQ9NZH4 202 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 CNIH4Q9P003 139 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 QSOX1O00391 747 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 NTN1O95631 604 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 COX5BP10606 129 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 EPCAMP16422 314 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 CXCL3P19876 107 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 METAP1P53582 386 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 CRYZQ08257 329 aaKnown RBP9.5□□□□□ -0.89
BRD9-209ENST00000490814 RAB30Q15771 203 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 TMEM44Q2T9K0 475 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 PGBD2Q6P3X8 592 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 NLRC3Q7RTR2 1065 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 ZER1Q7Z7L7 766 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 ZNF527Q8NB42 609 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 BVESQ8NE79 360 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 AKR7LQ8NHP1 331 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 TMEM163Q8TC26 289 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 UCN3Q969E3 161 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 NXPE2Q96DL1 559 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 VRK1Q99986 396 aaPredicted RBP9.5□□□□□ -0.89
BRD9-209ENST00000490814 TRMT61BQ9BVS5 477 aaKnown RBP9.5□□□□□ -0.89
BRD9-209ENST00000490814 FAM170BA6NMN3 283 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 FAAHO00519 579 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 OR1F1O43749 312 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 LANCL1O43813 399 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 CPEP16870 476 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 CD79BP40259 229 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 RNF144AP50876 292 aaPredicted RBP9.5□□□□□ -0.89
BRD9-209ENST00000490814 PNLIPRP1P54315 467 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 TAS2R41P59536 307 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 SNRPGP62308 76 aaKnown RBP9.5□□□□□ -0.89
BRD9-209ENST00000490814 NTHL1P78549 312 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 SSPNQ14714 243 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 LASP1Q14847 261 aaKnown RBP9.5□□□□□ -0.89
BRD9-209ENST00000490814 ZNF791Q3KP31 576 aaPredicted RBP9.5□□□□□ -0.89
BRD9-209ENST00000490814 OR2B11Q5JQS5 317 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 SLC9B2Q86UD5 537 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 C17orf64Q86WR6 236 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 OR4D11Q8NGI4 311 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 ELP5Q8TE02 316 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 RFT1Q96AA3 541 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 CXorf40BQ96DE9 158 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 ZFP3Q96NJ6 502 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 THAP7Q9BT49 309 aaPredicted RBP9.5□□□□□ -0.89
BRD9-209ENST00000490814 OR51J1Q9H342 316 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 MYNNQ9NPC7 610 aa9.5□□□□□ -0.89
BRD9-209ENST00000490814 SLC5A10A0PJK1 596 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 PPM1DO15297 605 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 H2AFB1P0C5Y9 115 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 H2AFB2P0C5Z0 115 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 ATXN8OSP0DMR3 200 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 FOSL2P15408 326 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 ELK1P19419 428 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 PVALBP20472 110 aaPredicted RBP9.49□□□□□ -0.89
BRD9-209ENST00000490814 ST8SIA6P61647 398 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 ILKQ13418 452 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 RAB33AQ14088 237 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 SYT14P1Q58G82 188 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 RGS7BPQ6MZT1 257 aaPredicted RBP9.49□□□□□ -0.89
BRD9-209ENST00000490814 MTFR2Q6P444 385 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 KANSL1Q7Z3B3 1105 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 KIAA0907Q7Z7F0 614 aaPredicted RBP9.49□□□□□ -0.89
BRD9-209ENST00000490814 WDSUB1Q8N9V3 476 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 OR11H7Q8NGC8 314 aa9.49□□□□□ -0.89
BRD9-209ENST00000490814 OR2T4Q8NH00 348 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms