RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 FOXA1P55317 472 aa12.33□□□□□ -0.44
VARS-227ENST00000489979 PKNOX1P55347 436 aa12.33□□□□□ -0.44
VARS-227ENST00000489979 ZNF117Q03924 483 aa12.33□□□□□ -0.44
VARS-227ENST00000489979 DUSP5Q16690 384 aa12.33□□□□□ -0.44
VARS-227ENST00000489979 IMPG1Q17R60 797 aa12.33□□□□□ -0.44
VARS-227ENST00000489979 CCNJQ5T5M9 372 aa12.33□□□□□ -0.44
VARS-227ENST00000489979 IL17RELQ6ZVW7 336 aa12.33□□□□□ -0.44
VARS-227ENST00000489979 SZRD1Q7Z422 152 aa12.33□□□□□ -0.44
VARS-227ENST00000489979 FBXL14Q8N1E6 418 aa12.33□□□□□ -0.44
VARS-227ENST00000489979 MUC15Q8N387 334 aa12.33□□□□□ -0.44
VARS-227ENST00000489979 SLC16A11Q8NCK7 471 aa12.33□□□□□ -0.44
VARS-227ENST00000489979 NUP43Q8NFH3 380 aa12.33□□□□□ -0.44
VARS-227ENST00000489979 C10orf105Q8TEF2 133 aa12.33□□□□□ -0.44
VARS-227ENST00000489979 ZFP90Q8TF47 636 aa12.33□□□□□ -0.44
VARS-227ENST00000489979 DCAKDQ8WVC6 231 aa12.33□□□□□ -0.44
VARS-227ENST00000489979 CIDECQ96AQ7 238 aaPredicted RBP12.33□□□□□ -0.44
VARS-227ENST00000489979 OTUB1Q96FW1 271 aaPredicted RBP12.33□□□□□ -0.44
VARS-227ENST00000489979 RADILQ96JH8 1075 aa12.33□□□□□ -0.44
VARS-227ENST00000489979 PSD2Q9BQI7 771 aa12.33□□□□□ -0.44
VARS-227ENST00000489979 TMEM216Q9P0N5 145 aa12.33□□□□□ -0.44
VARS-227ENST00000489979 KLHL9Q9P2J3 617 aa12.33□□□□□ -0.44
VARS-227ENST00000489979 POU2F3Q9UKI9 436 aa12.33□□□□□ -0.44
VARS-227ENST00000489979 STK38LQ9Y2H1 464 aa12.33□□□□□ -0.44
VARS-227ENST00000489979 GOLGA8QA0A0J9YX86 632 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 A0A1W2PQD3 144 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 GOLGA8OA6NCC3 632 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 GOLGA8NF8WBI6 632 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 GOLGA8RI6L899 631 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 PDPK1O15530 556 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 OIP5O43482 229 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 RGS14O43566 566 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 PGM3O95394 542 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 NUDT14O95848 222 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 GGT1P19440 569 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 ATP5F1P24539 256 aaPredicted RBP12.32□□□□□ -0.44
VARS-227ENST00000489979 RNF144AP50876 292 aaPredicted RBP12.32□□□□□ -0.44
VARS-227ENST00000489979 FABP6P51161 128 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 PRKAA2P54646 552 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 LSM11P83369 360 aaKnown RBP eCLIP12.32□□□□□ -0.44
VARS-227ENST00000489979 SPOCK1Q08629 439 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 ANKRD26P1Q6NSI1 321 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 NOXRED1Q6NXP6 359 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 SLC22A25Q6T423 547 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 CBLN3Q6UW01 205 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 IKBIPQ70UQ0 350 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 SSX8Q7RTT4 187 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 P2RY8Q86VZ1 359 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 FAM76AQ8TAV0 307 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 PHOSPHO1Q8TCT1 267 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 PROX1Q92786 737 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 C16orf58Q96GQ5 468 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 EGLN2Q96KS0 407 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 MS4A4EQ96PG1 132 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 ZNF300Q96RE9 604 aaPredicted RBP12.32□□□□□ -0.44
VARS-227ENST00000489979 CDC42EP4Q9H3Q1 356 aaKnown RBP12.32□□□□□ -0.44
VARS-227ENST00000489979 CHODLQ9H9P2 273 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 MID1IP1Q9NPA3 183 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 ZNF180Q9UJW8 692 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 MGAT4BQ9UQ53 548 aa12.32□□□□□ -0.44
VARS-227ENST00000489979 A0A1W2PNR3 127 aa12.31□□□□□ -0.44
VARS-227ENST00000489979 OR5H1A6NKK0 313 aa12.31□□□□□ -0.44
VARS-227ENST00000489979 KIF2AO00139 706 aaPredicted RBP12.31□□□□□ -0.44
VARS-227ENST00000489979 ALOX5P09917 674 aa12.31□□□□□ -0.44
VARS-227ENST00000489979 COX5AP20674 150 aa12.31□□□□□ -0.44
VARS-227ENST00000489979 USF1P22415 310 aaPredicted RBP12.31□□□□□ -0.44
VARS-227ENST00000489979 LCN1P31025 176 aa12.31□□□□□ -0.44
VARS-227ENST00000489979 SERPINB4P48594 390 aa12.31□□□□□ -0.44
VARS-227ENST00000489979 RAC3P60763 192 aa12.31□□□□□ -0.44
VARS-227ENST00000489979 RASGEF1BQ0VAM2 473 aa12.31□□□□□ -0.44
VARS-227ENST00000489979 TOMM34Q15785 309 aaPredicted RBP12.31□□□□□ -0.44
VARS-227ENST00000489979 ARL13AQ5H913 290 aaPredicted RBP12.31□□□□□ -0.44
VARS-227ENST00000489979 TMEM108Q6UXF1 575 aa12.31□□□□□ -0.44
VARS-227ENST00000489979 B3GLCTQ6Y288 498 aa12.31□□□□□ -0.44
VARS-227ENST00000489979 SLC22A9Q8IVM8 553 aa12.31□□□□□ -0.44
VARS-227ENST00000489979 COX18Q8N8Q8 333 aa12.31□□□□□ -0.44
VARS-227ENST00000489979 OR52N5Q8NH56 324 aa12.31□□□□□ -0.44
VARS-227ENST00000489979 L3HYPDHQ96EM0 354 aa12.31□□□□□ -0.44
VARS-227ENST00000489979 NTMQ9P121 344 aa12.31□□□□□ -0.44
VARS-227ENST00000489979 KCNS2Q9ULS6 477 aa12.31□□□□□ -0.44
VARS-227ENST00000489979 GPC6Q9Y625 555 aaPredicted RBP12.31□□□□□ -0.44
VARS-227ENST00000489979 NPIPA5A0A0B4J1W7 369 aa12.3□□□□□ -0.44
VARS-227ENST00000489979 SLC35F4A4IF30 521 aa12.3□□□□□ -0.44
VARS-227ENST00000489979 NPIPA7E9PJI5 369 aa12.3□□□□□ -0.44
VARS-227ENST00000489979 H7C417 338 aa12.3□□□□□ -0.44
VARS-227ENST00000489979 CYTIPO60759 359 aa12.3□□□□□ -0.44
VARS-227ENST00000489979 SNRPAP09012 282 aaKnown RBP12.3□□□□□ -0.44
VARS-227ENST00000489979 CSF3P09919 207 aa12.3□□□□□ -0.44
VARS-227ENST00000489979 DHRS4L1P0CG22 281 aa12.3□□□□□ -0.44
VARS-227ENST00000489979 NPIPA8P0DM63 369 aa12.3□□□□□ -0.44
VARS-227ENST00000489979 CD40P25942 277 aa12.3□□□□□ -0.44
VARS-227ENST00000489979 SLC7A1P30825 629 aa12.3□□□□□ -0.44
VARS-227ENST00000489979 GZMKP49863 264 aa12.3□□□□□ -0.44
VARS-227ENST00000489979 ZNF83P51522 516 aa12.3□□□□□ -0.44
VARS-227ENST00000489979 P2RX1P51575 399 aa12.3□□□□□ -0.44
VARS-227ENST00000489979 CHRNEQ04844 493 aa12.3□□□□□ -0.44
VARS-227ENST00000489979 ZNF385BQ569K4 471 aa12.3□□□□□ -0.44
VARS-227ENST00000489979 FAM120AOSQ5T036 256 aa12.3□□□□□ -0.44
VARS-227ENST00000489979 FAM166AQ6J272 317 aa12.3□□□□□ -0.44
VARS-227ENST00000489979 LRIG3Q6UXM1 1119 aa12.3□□□□□ -0.44
VARS-227ENST00000489979 TRIM46Q7Z4K8 759 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms