RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 PIWIL2Q8TC59 973 aaKnown RBP14.09□□□□□ -0.15
PLOD3-216ENST00000489927 CDS1Q92903 461 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 CHMP6Q96FZ7 201 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 STACQ99469 402 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 POTEKPQ9BYX7 375 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 TUBB1Q9H4B7 451 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 COQ10BQ9H8M1 238 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 GP6Q9HCN6 339 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 DUSP22Q9NRW4 184 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 SIRT3Q9NTG7 399 aaPredicted RBP14.09□□□□□ -0.15
PLOD3-216ENST00000489927 ZCCHC3Q9NUD5 404 aaKnown RBP14.09□□□□□ -0.15
PLOD3-216ENST00000489927 GIN1Q9NXP7 522 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 ICAM5Q9UMF0 924 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 CARD8Q9Y2G2 431 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 FIS1Q9Y3D6 152 aa14.09□□□□□ -0.15
PLOD3-216ENST00000489927 CHD3Q12873 2000 aaKnown RBP14.08□□□□□ -0.15
PLOD3-216ENST00000489927 IGHV3-15A0A0B4J1V0 119 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 NPIPA5A0A0B4J1W7 369 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 DPRXA6NFQ7 191 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 GJE1A6NN92 205 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 ZNF814B7Z6K7 855 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 NPIPA7E9PJI5 369 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 AZIN1O14977 448 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 NDUFS7O75251 213 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 TP53P04637 393 aaPredicted RBP14.08□□□□□ -0.16
PLOD3-216ENST00000489927 THBS1P07996 1170 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 LINC00032P0C843 101 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 NPIPA8P0DM63 369 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 CPA3P15088 417 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 ENPP1P22413 925 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 ITGADQ13349 1161 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 LASP1Q14847 261 aaKnown RBP14.08□□□□□ -0.16
PLOD3-216ENST00000489927 KLHL26Q53HC5 615 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 HMBOX1Q6NT76 420 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 LRIG3Q6UXM1 1119 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 DNAJC14Q6Y2X3 702 aaPredicted RBP14.08□□□□□ -0.16
PLOD3-216ENST00000489927 DNM1P46Q6ZS02 220 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 MTERF4Q7Z6M4 381 aaKnown RBP14.08□□□□□ -0.16
PLOD3-216ENST00000489927 TDRPQ86YL5 185 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 ATP6V1C2Q8NEY4 427 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 ZFP90Q8TF47 636 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 ZNF524Q96C55 264 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 TXLNGYQ9BZA5 131 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 TRIM2Q9C040 744 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 PIGUQ9H490 435 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 GDF2Q9UK05 429 aaPredicted RBP14.08□□□□□ -0.16
PLOD3-216ENST00000489927 ING1Q9UK53 422 aaPredicted RBP14.08□□□□□ -0.16
PLOD3-216ENST00000489927 RTTNQ86VV8 2226 aa14.08□□□□□ -0.16
PLOD3-216ENST00000489927 LSM1O15116 133 aaKnown RBP14.07□□□□□ -0.16
PLOD3-216ENST00000489927 TLX2O43763 284 aaPredicted RBP14.07□□□□□ -0.16
PLOD3-216ENST00000489927 CD5LO43866 347 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 ADAM11O75078 769 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 NEFHP12036 1026 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 PRKCAP17252 672 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 ATP6V1C1P21283 382 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 CRHR1P34998 444 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 CCT5P48643 541 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 P2RX1P51575 399 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 MLC1Q15049 377 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 NDUFAF6Q330K2 333 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 GALNTL6Q49A17 601 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.07□□□□□ -0.16
PLOD3-216ENST00000489927 LIPMQ5VYY2 423 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 KANK2Q63ZY3 851 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 RNF165Q6ZSG1 346 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 Q6ZT83 130 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 BHLHA15Q7RTS1 189 aaPredicted RBP14.07□□□□□ -0.16
PLOD3-216ENST00000489927 IFT20Q8IY31 132 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 CNPY4Q8N129 248 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 CCDC63Q8NA47 563 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 ZNF527Q8NB42 609 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 GPR119Q8TDV5 335 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 MTERF3Q96E29 417 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 USB1Q9BQ65 265 aaKnown RBP14.07□□□□□ -0.16
PLOD3-216ENST00000489927 PSD2Q9BQI7 771 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 TRAF4Q9BUZ4 470 aaPredicted RBP14.07□□□□□ -0.16
PLOD3-216ENST00000489927 HOXD1Q9GZZ0 328 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 CXorf36Q9H7Y0 433 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 BCO1Q9HAY6 547 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 PRSS50Q9UI38 385 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 TMED5Q9Y3A6 229 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 DNAJC15Q9Y5T4 150 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 ACTL7BQ9Y614 415 aa14.07□□□□□ -0.16
PLOD3-216ENST00000489927 GPC6Q9Y625 555 aaPredicted RBP14.07□□□□□ -0.16
PLOD3-216ENST00000489927 KIF2AO00139 706 aaPredicted RBP14.06□□□□□ -0.16
PLOD3-216ENST00000489927 RAMP1O60894 148 aa14.06□□□□□ -0.16
PLOD3-216ENST00000489927 LYZL6O75951 148 aa14.06□□□□□ -0.16
PLOD3-216ENST00000489927 CD8AP01732 235 aa14.06□□□□□ -0.16
PLOD3-216ENST00000489927 BCKDHAP12694 445 aa14.06□□□□□ -0.16
PLOD3-216ENST00000489927 EDNRAP25101 427 aa14.06□□□□□ -0.16
PLOD3-216ENST00000489927 ASMTP46597 345 aa14.06□□□□□ -0.16
PLOD3-216ENST00000489927 SUMO3P55854 103 aaPredicted RBP14.06□□□□□ -0.16
PLOD3-216ENST00000489927 STK11Q15831 433 aa14.06□□□□□ -0.16
PLOD3-216ENST00000489927 DCST2Q5T1A1 773 aa14.06□□□□□ -0.16
PLOD3-216ENST00000489927 CDC73Q6P1J9 531 aa14.06□□□□□ -0.16
PLOD3-216ENST00000489927 R3HCC1LQ7Z5L2 792 aaKnown RBP14.06□□□□□ -0.16
PLOD3-216ENST00000489927 C10orf107Q8IVU9 208 aa14.06□□□□□ -0.16
PLOD3-216ENST00000489927 SLC43A2Q8N370 569 aa14.06□□□□□ -0.16
PLOD3-216ENST00000489927 OR7A2PQ8NGA2 310 aa14.06□□□□□ -0.16
PLOD3-216ENST00000489927 MRGPRX4Q96LA9 322 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms