RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 GINS1Q14691 196 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 LTB4RQ15722 352 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 ZNF750Q32MQ0 723 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 SYT14P1Q58G82 188 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 OGFOD3Q6PK18 319 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 COMTD1Q86VU5 262 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 MCATQ8IVS2 390 aaKnown RBP7.84□□□□□ -1.15
VTI1A-207ENST00000489357 CDK20Q8IZL9 346 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 OR4N4Q8N0Y3 316 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 SLC15A4Q8N697 577 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 NANOGP1Q8N7R0 232 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 COX18Q8N8Q8 333 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 MCFD2Q8NI22 146 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 BRIX1Q8TDN6 353 aaKnown RBP7.84□□□□□ -1.15
VTI1A-207ENST00000489357 JPH3Q8WXH2 748 aaPredicted RBP7.84□□□□□ -1.15
VTI1A-207ENST00000489357 SLC9A6Q92581 669 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 TTC9Q92623 222 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 KAT2AQ92830 837 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 CDS1Q92903 461 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 MVB12AQ96EY5 273 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 SLC41A3Q96GZ6 507 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 FCRL4Q96PJ5 515 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 MCHR1Q99705 422 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 ZNF559Q9BR84 538 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 RHNO1Q9BSD3 238 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 YIPF4Q9BSR8 244 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 G6PC3Q9BUM1 346 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 EQTNQ9NQ60 294 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 FAIMQ9NVQ4 179 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 NDUFB11Q9NX14 153 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 ETAA1Q9NY74 926 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 PLCL2Q9UPR0 1127 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 LSM2Q9Y333 95 aaKnown RBP7.84□□□□□ -1.15
VTI1A-207ENST00000489357 EXOSC1Q9Y3B2 195 aaKnown RBP7.84□□□□□ -1.15
VTI1A-207ENST00000489357 PEX16Q9Y5Y5 336 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 KCNE3Q9Y6H6 103 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 CSNK1G3Q9Y6M4 447 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 CDH10Q9Y6N8 788 aa7.84□□□□□ -1.15
VTI1A-207ENST00000489357 TRBV23OR9-2A0A075B6M9 112 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 A0A075B6Q4 140 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 METTL15A6NJ78 407 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 LMO7DNF2Z398 122 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 MYL12BO14950 172 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 CHST10O43529 356 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 FGF17O60258 216 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 OR10H2O60403 315 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 FCMRO60667 390 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 PRAMEF2O60811 474 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 SULT1C4O75897 302 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 PIAS2O75928 621 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 RCBTB2O95199 551 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 SNX4O95219 450 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 SOX14O95416 240 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 PTHP01270 115 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 IGF2P01344 180 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 STATHP02808 62 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 EIF2S1P05198 315 aaKnown RBP7.83□□□□□ -1.16
VTI1A-207ENST00000489357 EDN3P14138 238 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 TNNI3P19429 210 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 NT5EP21589 574 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 DRD5P21918 477 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 GADD45AP24522 165 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 EPHA8P29322 1005 aaPredicted RBP7.83□□□□□ -1.16
VTI1A-207ENST00000489357 S100A5P33763 92 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 OPRL1P41146 370 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 ETV6P41212 452 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 AVPR1BP47901 424 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 LSSP48449 732 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 ZNF136P52737 540 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 PPP5CP53041 499 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 NUDT6P53370 316 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 CTBP2P56545 445 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 VBP1P61758 197 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 NCS1P62166 190 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 PSPHP78330 225 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 SHC2P98077 582 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 BDH1Q02338 343 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 PRKCDQ05655 676 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 ACSM1Q08AH1 577 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 MGAT2Q10469 447 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 MED22Q15528 200 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 SNAPC1Q16533 368 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 YOD1Q5VVQ6 348 aaPredicted RBP7.83□□□□□ -1.16
VTI1A-207ENST00000489357 TMEM236Q5W0B7 351 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 ZNF836Q6ZNA1 936 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 ZNF620Q6ZNG0 422 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 C8orf86Q6ZUL3 223 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 TMPRSS11FQ6ZWK6 438 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 GDF7Q7Z4P5 450 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 GLRX5Q86SX6 157 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 VRK2Q86Y07 508 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 GID4Q8IVV7 300 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 GALNT12Q8IXK2 581 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 ZNF440Q8IYI8 595 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 TCEANCQ8N8B7 351 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 LSMEM1Q8N8F7 131 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 POGLUT1Q8NBL1 392 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 OR2T33Q8NG76 320 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 NDNFQ8TB73 568 aa7.83□□□□□ -1.16
VTI1A-207ENST00000489357 ANKRD9Q96BM1 317 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms