RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 SFT2D3Q587I9 215 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 MEDAGQ5VYS4 303 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 SLC22A18ASQ8N1D0 253 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 C15orf54Q8N8G6 183 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 OR51G2Q8NGK0 314 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 OR6T1Q8NGN1 323 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 SCFD1Q8WVM8 642 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 ITLN1Q8WWA0 313 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 IL1F10Q8WWZ1 152 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 TMEM80Q96HE8 168 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 OR5B2Q96R09 309 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 ATOH8Q96SQ7 321 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 CCDC77Q9BR77 488 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 TUBGCP2Q9BSJ2 902 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 ZBP1Q9H171 429 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 VPS37BQ9H9H4 285 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 SGK2Q9HBY8 427 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 PAK5Q9P286 719 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 ARMCX1Q9P291 453 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 WRAP73Q9P2S5 460 aaPredicted RBP3.38□□□□□ -1.87
XRN1-213ENST00000489241 ADAM28Q9UKQ2 775 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 SCML2Q9UQR0 700 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 PIGLQ9Y2B2 252 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 L3MBTL1Q9Y468 752 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 STYXL1Q9Y6J8 313 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 NSD2O96028 1365 aa3.38□□□□□ -1.87
XRN1-213ENST00000489241 IGHV2-70DA0A0C4DH43 119 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 A0A1B0GVY2 172 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 CTAGE15A4D2H0 777 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 ARHGEF35A5YM69 484 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 ZNF840PA6NDX5 716 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 FAM47DPA6NHR8 397 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 CCT8L1PA6NM43 557 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 OR52A4PA6NMU1 304 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 SNTNA6NMZ2 147 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 ZNF716A6NP11 495 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 G3V3Y1 287 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 SAP18O00422 153 aaKnown RBP3.37□□□□□ -1.87
XRN1-213ENST00000489241 FCN1O00602 326 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 SLC17A2O00624 439 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 RS1O15537 224 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 TIMM8AO60220 97 aaPredicted RBP3.37□□□□□ -1.87
XRN1-213ENST00000489241 N4BP1O75113 896 aaKnown RBP3.37□□□□□ -1.87
XRN1-213ENST00000489241 UQCRFS1P1P0C7P4 283 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 ZNF735P0CB33 412 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 CT45A10P0DMU9 189 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 POU2F1P14859 743 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 ACADSP16219 412 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 CYP2B6P20813 491 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 PTBP1P26599 531 aaKnown RBP eCLIP3.37□□□□□ -1.87
XRN1-213ENST00000489241 ATP5IP56385 69 aaPredicted RBP3.37□□□□□ -1.87
XRN1-213ENST00000489241 ERVPABLB-1P60509 514 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 VLDLRP98155 873 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 CRMP1Q14194 572 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 SLC25A52Q3SY17 297 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 PDZK1Q5T2W1 519 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 ATL3Q6DD88 541 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 KRTAP5-4Q6L8H1 288 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 PAQR6Q6TCH4 344 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 TRPM8Q7Z2W7 1104 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 CTAGE6Q86UF2 777 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 SERPINA9Q86WD7 417 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 NBPF5PQ86XG9 351 aaPredicted RBP3.37□□□□□ -1.87
XRN1-213ENST00000489241 DHRSXQ8N5I4 330 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 KIR3DL3Q8N743 410 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 Q8N9G6 341 aaPredicted RBP3.37□□□□□ -1.87
XRN1-213ENST00000489241 TRUB1Q8WWH5 349 aaKnown RBP3.37□□□□□ -1.87
XRN1-213ENST00000489241 ARNTL2Q8WYA1 636 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 TCEANC2Q96MN5 208 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 RPRD1AQ96P16 312 aaPredicted RBP3.37□□□□□ -1.87
XRN1-213ENST00000489241 RBM14Q96PK6 669 aaKnown RBP3.37□□□□□ -1.87
XRN1-213ENST00000489241 MTMR9Q96QG7 549 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 CITED1Q99966 193 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 PARD6BQ9BYG5 372 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 GPR61Q9BZJ8 451 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 ROPN1BQ9BZX4 212 aaPredicted RBP3.37□□□□□ -1.87
XRN1-213ENST00000489241 OPN3Q9H1Y3 402 aaPredicted RBP3.37□□□□□ -1.87
XRN1-213ENST00000489241 GNB4Q9HAV0 340 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 MCCC2Q9HCC0 563 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 TIGARQ9NQ88 270 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 ETNK2Q9NVF9 386 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 SEC14L3Q9UDX4 400 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 SLC2A6Q9UGQ3 507 aa3.37□□□□□ -1.87
XRN1-213ENST00000489241 AK6Q9Y3D8 172 aaKnown RBP3.37□□□□□ -1.87
XRN1-213ENST00000489241 SGK1O00141 431 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 ERLIN1O75477 346 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 RHBDL1O75783 438 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 SLC2A10O95528 541 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 CD55P08174 381 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 LAMP1P11279 417 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 CD80P33681 288 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 EFNB2P52799 333 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 IDI1Q13907 227 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 KCNJ11Q14654 390 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 SLC10A1Q14973 349 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 FAM199XQ6PEV8 388 aaPredicted RBP3.36□□□□□ -1.87
XRN1-213ENST00000489241 GPRIN3Q6ZVF9 776 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 NANOGNBQ7Z5D8 188 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 DHDDSQ86SQ9 333 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 CSNK1A1LQ8N752 337 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms