RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 GJE1A6NN92 205 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 EEF1E1-BLOC1S5C9J1V9 151 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 SYT5O00445 386 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 EEF1E1O43324 174 aaKnown RBP12.87□□□□□ -0.35
BRCA1-218ENST00000489037 KIAA0513O60268 411 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 EDF1O60869 148 aaKnown RBP12.87□□□□□ -0.35
BRCA1-218ENST00000489037 UGT2B17O75795 530 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 SYNGR4O95473 234 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 H6PDO95479 791 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 CRHP06850 196 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 FCGR2AP12318 317 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 NCF2P19878 526 aaPredicted RBP12.87□□□□□ -0.35
BRCA1-218ENST00000489037 PGCP20142 388 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 ADH6P28332 368 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 UQCRC1P31930 480 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 EIF1AXP47813 144 aaKnown RBP12.87□□□□□ -0.35
BRCA1-218ENST00000489037 AGFG1P52594 562 aaKnown RBP12.87□□□□□ -0.35
BRCA1-218ENST00000489037 SUCLG1P53597 346 aaKnown RBP12.87□□□□□ -0.35
BRCA1-218ENST00000489037 CLDN15P56746 228 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 CLDN20P56880 219 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 CBLN3Q6UW01 205 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 LRRC74BQ6ZQY2 392 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 METTL25Q8N6Q8 603 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 RELL2Q8NC24 303 aaPredicted RBP12.87□□□□□ -0.35
BRCA1-218ENST00000489037 GPR119Q8TDV5 335 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 STON2Q8WXE9 905 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 TMEM234Q8WY98 164 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 PMM1Q92871 262 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 RNASE6Q93091 150 aaKnown RBP12.87□□□□□ -0.35
BRCA1-218ENST00000489037 SPDL1Q96EA4 605 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 ARSGQ96EG1 525 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 THOC1Q96FV9 657 aaKnown RBP12.87□□□□□ -0.35
BRCA1-218ENST00000489037 SAP130Q9H0E3 1048 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 PIGMQ9H3S5 423 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 MTHFD2LQ9H903 347 aaPredicted RBP12.87□□□□□ -0.35
BRCA1-218ENST00000489037 TPT1P8Q9HAU6 139 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 NPHS2Q9NP85 383 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 NPDC1Q9NQX5 325 aaPredicted RBP12.87□□□□□ -0.35
BRCA1-218ENST00000489037 CALML5Q9NZT1 146 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 P2RX2Q9UBL9 471 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 DCTN4Q9UJW0 460 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 ZNF175Q9Y473 711 aa12.87□□□□□ -0.35
BRCA1-218ENST00000489037 MAST4O15021 2626 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 CRYBG3Q68DQ2 2970 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 NR5A2O00482 541 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 LINGO3P0C6S8 592 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 UBTFL6P0CB48 400 aaPredicted RBP12.86□□□□□ -0.35
BRCA1-218ENST00000489037 TROVE2P10155 538 aaKnown RBP eCLIP12.86□□□□□ -0.35
BRCA1-218ENST00000489037 ELK4P28324 431 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 CPA2P48052 419 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 DSTNP60981 165 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 CHRNEQ04844 493 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 FOXF1Q12946 379 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 FGFBP1Q14512 234 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 SYPL1Q16563 259 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 NDUFAF6Q330K2 333 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 AGKQ53H12 422 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 COX20Q5RI15 118 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 BLOC1S3Q6QNY0 202 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 FRRS1Q6ZNA5 592 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 ESPNLQ6ZVH7 1005 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 OLIG3Q7RTU3 272 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 KIF18BQ86Y91 864 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 DMRTC2Q8IXT2 367 aaPredicted RBP12.86□□□□□ -0.35
BRCA1-218ENST00000489037 GCNT2Q8N0V5 402 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 LILRA2Q8N149 483 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 ANKFN1Q8N957 763 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 FBXO27Q8NI29 283 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 GTF2H4Q92759 462 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 MRGPRX4Q96LA9 322 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 THUMPD3Q9BV44 507 aaKnown RBP12.86□□□□□ -0.35
BRCA1-218ENST00000489037 MED4Q9NPJ6 270 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 TIGARQ9NQ88 270 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 ZNF446Q9NWS9 450 aa12.86□□□□□ -0.35
BRCA1-218ENST00000489037 MCTS1Q9ULC4 181 aaKnown RBP12.86□□□□□ -0.35
BRCA1-218ENST00000489037 A0A096LPI6 279 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 A0A0G2JND7 137 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 H0YC42 278 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 CLIC1O00299 241 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 OIP5O43482 229 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 TGM6O95932 706 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 IL7RP16871 459 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 PRKCAP17252 672 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 PPIBP23284 216 aaKnown RBP12.85□□□□□ -0.35
BRCA1-218ENST00000489037 SLC6A8P48029 635 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 CRISP3P54108 245 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 TPD52P55327 224 aaPredicted RBP12.85□□□□□ -0.35
BRCA1-218ENST00000489037 KCNJ10P78508 379 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 FOXF2Q12947 444 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 MYBPHQ13203 477 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 PON3Q15166 354 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 QPRTQ15274 297 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 FBXL19-AS1Q494R0 122 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 AP1ARQ63HQ0 302 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 HBMQ6B0K9 141 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 GTF2IRD2BQ6EKJ0 949 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 SLC2A7Q6PXP3 512 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 PLXDC2Q6UX71 529 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 GTF2IRD2Q86UP8 949 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms