RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 ZCCHC2Q9C0B9 1178 aaKnown RBP7.13□□□□□ -1.27
BEST3-205ENST00000488961 MED20Q9H944 212 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 BRF2Q9HAW0 419 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 MRPS30Q9NP92 439 aaKnown RBP7.13□□□□□ -1.27
BEST3-205ENST00000488961 WSB2Q9NYS7 404 aaPredicted RBP7.13□□□□□ -1.27
BEST3-205ENST00000488961 MIOXQ9UGB7 285 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 APOBEC3BQ9UH17 382 aaKnown RBP7.13□□□□□ -1.27
BEST3-205ENST00000488961 ADAM30Q9UKF2 790 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 SESN1Q9Y6P5 492 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 LOC105369274A0A096LPK9 316 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 LOC102723532A0A0G2JNH3 316 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 A0A0G2JPF8 293 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 PQLC2LA1A4F0 135 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 HNRNPCL3B7ZW38 293 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 GTPBP1O00178 669 aaKnown RBP7.13□□□□□ -1.27
BEST3-205ENST00000488961 ABCD4O14678 606 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 GPX5O75715 221 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 NCR1O76036 304 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 LY86O95711 162 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 EGFP01133 1207 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 RLN2P04090 185 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 SRPRAP08240 638 aaKnown RBP7.13□□□□□ -1.27
BEST3-205ENST00000488961 HNRNPCL4P0DMR1 293 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 PRPH2P23942 346 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 IGFALSP35858 605 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 ACTR1BP42025 376 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 CCR8P51685 355 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 ACTR1AP61163 376 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 IKZF1Q13422 519 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 LGALSLQ3ZCW2 172 aaPredicted RBP7.13□□□□□ -1.27
BEST3-205ENST00000488961 FAM46CQ5VWP2 391 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 SLC6A19Q695T7 634 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 REEP3Q6NUK4 255 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 FAHD1Q6P587 224 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 OVCH2Q7RTZ1 564 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 KANSL1Q7Z3B3 1105 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 LHFPL3Q86UP9 236 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 OR4N4Q8N0Y3 316 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 ZFP82Q8N141 532 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 KRT78Q8N1N4 520 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 FBLIM1Q8WUP2 373 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 IPCEF1Q8WWN9 437 aaPredicted RBP7.13□□□□□ -1.27
BEST3-205ENST00000488961 MYDGFQ969H8 173 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 FAM46AQ96IP4 442 aaKnown RBP7.13□□□□□ -1.27
BEST3-205ENST00000488961 AIF1LQ9BQI0 150 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 CRB3Q9BUF7 120 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 BARHL1Q9BZE3 327 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 MBD2Q9UBB5 411 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 GLS2Q9UI32 602 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 ING4Q9UNL4 249 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 ICKQ9UPZ9 632 aa7.13□□□□□ -1.27
BEST3-205ENST00000488961 ATG2AQ2TAZ0 1938 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 C17orf113A0A1B0GUU1 675 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 C1QTNF3-AMACRE9PGA6 284 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 MAGEB4O15481 346 aaPredicted RBP7.12□□□□□ -1.27
BEST3-205ENST00000488961 TRIM3O75382 744 aaPredicted RBP7.12□□□□□ -1.27
BEST3-205ENST00000488961 KLF8O95600 359 aaPredicted RBP7.12□□□□□ -1.27
BEST3-205ENST00000488961 AIFM1O95831 613 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 RB1P06400 928 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 CEACAM5P06731 702 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 CD63P08962 238 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 CBR1P16152 277 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 SOX18P35713 384 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 MAP2K3P46734 347 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 ERVK-25P63136 954 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 ALKBH1Q13686 389 aaKnown RBP7.12□□□□□ -1.27
BEST3-205ENST00000488961 GXYLT1Q4G148 440 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 PYDC2Q56P42 97 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 TMEM196Q5HYL7 178 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 C9orf152Q5JTZ5 239 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 METRNLQ641Q3 311 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 ACSM5Q6NUN0 579 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 PODNL1Q6PEZ8 512 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 FAM111BQ6SJ93 734 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 LAS2Q8IYD9 372 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 DNAJC22Q8N4W6 341 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 ACOT4Q8N9L9 421 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 HMGB4Q8WW32 186 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 TMEM68Q96MH6 324 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 GAL3ST1Q99999 423 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 CMSS1Q9BQ75 279 aaKnown RBP7.12□□□□□ -1.27
BEST3-205ENST00000488961 BHLHE41Q9C0J9 482 aaPredicted RBP7.12□□□□□ -1.27
BEST3-205ENST00000488961 C8orf33Q9H7E9 229 aaPredicted RBP7.12□□□□□ -1.27
BEST3-205ENST00000488961 ABCB9Q9NP78 766 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 ADAP2Q9NPF8 381 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 SNTG1Q9NSN8 517 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 WBP1LQ9NX94 342 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 NDRG2Q9UN36 371 aaKnown RBP7.12□□□□□ -1.27
BEST3-205ENST00000488961 PPIEQ9UNP9 301 aaKnown RBP7.12□□□□□ -1.27
BEST3-205ENST00000488961 ADAMDEC1O15204 470 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 P2RX6O15547 441 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 PRKYO43930 277 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 KDM4BO94953 1096 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 EPPINO95925 133 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 SYPP08247 313 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 ZNF888P0CJ79 500 aaPredicted RBP7.12□□□□□ -1.27
BEST3-205ENST00000488961 GGT2P36268 569 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 DEFA5Q01523 94 aa7.12□□□□□ -1.27
BEST3-205ENST00000488961 EXOSC7Q15024 291 aaKnown RBP7.12□□□□□ -1.27
BEST3-205ENST00000488961 TEAD4Q15561 434 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms