RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 EIF4E2O60573 245 aaKnown RBP12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 PABPC4LP0CB38 370 aaKnown RBP12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 UBL4AP11441 157 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 POU2F1P14859 743 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 S100A3P33764 101 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 KCNJ5P48544 419 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 KHKP50053 298 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 IST1P53990 364 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 CTBP2P56545 445 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 RPS26P62854 115 aaKnown RBP12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 LRRC74AQ0VAA2 488 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 FOXF1Q12946 379 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 CBFBQ13951 182 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 GUSBP1Q15486 140 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 CTU2Q2VPK5 515 aaKnown RBP12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 ARHGAP11BQ3KRB8 267 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 SPANXN4Q5MJ08 99 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 HBMQ6B0K9 141 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 GTF2IRD2BQ6EKJ0 949 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 SPATA19Q7Z5L4 167 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 GTF2IRD2Q86UP8 949 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 ANKRD46Q86W74 232 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 LILRA2Q8N149 483 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 ARFGAP2Q8N6H7 521 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 TRIML2Q8N7C3 387 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 TOR1AIP2Q8NFQ8 470 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 POC1BQ8TC44 478 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 MGARPQ8TDB4 240 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 FOXC2Q99958 501 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 OPN3Q9H1Y3 402 aaPredicted RBP12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 TMEM185BQ9H7F4 350 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 AIG1Q9NVV5 245 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 ZNF226Q9NYT6 803 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 ICAM5Q9UMF0 924 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 TESMINQ9Y4I5 508 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 KCNE3Q9Y6H6 103 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 HEATR5AQ86XA9 2040 aa12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 SDHDO14521 159 aa12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 TNFSF11O14788 317 aa12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 CXCL13O43927 109 aa12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 SCN2BO60939 215 aa12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 SS18L1O75177 396 aaPredicted RBP12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 SNNO75324 88 aaPredicted RBP12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 AQP8O94778 261 aa12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 CPSF4O95639 269 aaKnown RBP12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 GUSBP08236 651 aa12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 SFTPDP35247 375 aa12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 CHI3L1P36222 383 aaPredicted RBP12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 CCR4P51679 360 aa12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 WDR4P57081 412 aaKnown RBP12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 PPP2R2AP63151 447 aa12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 HPCAP84074 193 aa12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 SELENBP1Q13228 472 aa12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 GPR68Q15743 365 aa12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 FAM174BQ3ZCQ3 159 aa12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 PDZK1Q5T2W1 519 aa12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 CBLN3Q6UW01 205 aa12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 PAMR1Q6UXH9 720 aa12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 CPNE4Q96A23 557 aaPredicted RBP12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 REXO5Q96IC2 774 aaKnown RBP12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 MRGPRX4Q96LA9 322 aa12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 ZBTB18Q99592 522 aa12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 ZNF350Q9GZX5 532 aa12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 OR51I1Q9H343 314 aa12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 SERHL2Q9H4I8 314 aa12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 POLE3Q9NRF9 147 aa12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 BTNL2Q9UIR0 455 aa12.38□□□□□ -0.43
SPTLC1-207ENST00000488921 F8P00451 2351 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 SPG11Q96JI7 2443 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 A0A0J9YW62 118 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 SERINC4A6NH21 518 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 CGAP01215 116 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 RAF1P04049 648 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 HRGP04196 525 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 ALDOCP09972 364 aaKnown RBP12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 PRKCAP17252 672 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 UGT2B10P36537 528 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 ANXA11P50995 505 aaKnown RBP12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 CARD18P57730 90 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 TXNL4AP83876 142 aaKnown RBP12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 FAM27E3Q08E93 113 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 ZNF141Q15928 474 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 SAXO2Q658L1 398 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 HEPHL1Q6MZM0 1159 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 ZNF474Q6S9Z5 364 aaPredicted RBP12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 EIF3MQ7L2H7 374 aaKnown RBP12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 STK32CQ86UX6 486 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 CLEC4FQ8N1N0 589 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 GLB1L3Q8NCI6 653 aaPredicted RBP12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 OR5W2Q8NH69 310 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 RFWD2Q8NHY2 731 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 FBXO27Q8NI29 283 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 GPR119Q8TDV5 335 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 DYDC1Q8WWB3 177 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 ARSGQ96EG1 525 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 NEURL3Q96EH8 262 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 CCDC115Q96NT0 180 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 NPAS1Q99742 590 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 SLC35A5Q9BS91 424 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms