RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 COQ10BQ9H8M1 238 aa16.4■□□□□ 0.22
HDAC6-231ENST00000488905 LAMP3Q9UQV4 416 aa16.4■□□□□ 0.22
HDAC6-231ENST00000488905 RNF115Q9Y4L5 304 aa16.4■□□□□ 0.22
HDAC6-231ENST00000488905 SNX8Q9Y5X2 465 aa16.4■□□□□ 0.22
HDAC6-231ENST00000488905 GPC6Q9Y625 555 aaPredicted RBP16.4■□□□□ 0.22
HDAC6-231ENST00000488905 FBN3Q75N90 2809 aa16.4■□□□□ 0.22
HDAC6-231ENST00000488905 FBN1P35555 2871 aaKnown RBP16.4■□□□□ 0.22
HDAC6-231ENST00000488905 GJE1A6NN92 205 aa16.39■□□□□ 0.21
HDAC6-231ENST00000488905 TMEM114B3SHH9 223 aa16.39■□□□□ 0.21
HDAC6-231ENST00000488905 OIP5O43482 229 aa16.39■□□□□ 0.21
HDAC6-231ENST00000488905 IL32P24001 234 aa16.39■□□□□ 0.21
HDAC6-231ENST00000488905 ADH6P28332 368 aa16.39■□□□□ 0.21
HDAC6-231ENST00000488905 MAPK1P28482 360 aa16.39■□□□□ 0.21
HDAC6-231ENST00000488905 RPL3P39023 403 aaKnown RBP16.39■□□□□ 0.21
HDAC6-231ENST00000488905 P2RX1P51575 399 aa16.39■□□□□ 0.21
HDAC6-231ENST00000488905 KLHL26Q53HC5 615 aa16.39■□□□□ 0.21
HDAC6-231ENST00000488905 DCST2Q5T1A1 773 aa16.39■□□□□ 0.21
HDAC6-231ENST00000488905 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.39■□□□□ 0.21
HDAC6-231ENST00000488905 ALKBH2Q6NS38 261 aa16.39■□□□□ 0.21
HDAC6-231ENST00000488905 ADAM5Q6NVV9 412 aa16.39■□□□□ 0.21
HDAC6-231ENST00000488905 FCRLAQ7L513 359 aa16.39■□□□□ 0.21
HDAC6-231ENST00000488905 NUFIP2Q7Z417 695 aaKnown RBP16.39■□□□□ 0.21
HDAC6-231ENST00000488905 HOMEZQ8IX15 550 aa16.39■□□□□ 0.21
HDAC6-231ENST00000488905 TUSC5Q8IXB3 177 aa16.39■□□□□ 0.21
HDAC6-231ENST00000488905 OR56A1Q8NGH5 318 aa16.39■□□□□ 0.21
HDAC6-231ENST00000488905 FBXO27Q8NI29 283 aa16.39■□□□□ 0.21
HDAC6-231ENST00000488905 ZFP90Q8TF47 636 aa16.39■□□□□ 0.21
HDAC6-231ENST00000488905 HDHD5Q9BXW7 423 aa16.39■□□□□ 0.21
HDAC6-231ENST00000488905 ACTRT3Q9BYD9 372 aa16.39■□□□□ 0.21
HDAC6-231ENST00000488905 GP6Q9HCN6 339 aa16.39■□□□□ 0.21
HDAC6-231ENST00000488905 MKS1Q9NXB0 559 aa16.39■□□□□ 0.21
HDAC6-231ENST00000488905 GIMAP2Q9UG22 337 aa16.39■□□□□ 0.21
HDAC6-231ENST00000488905 ICAM5Q9UMF0 924 aa16.39■□□□□ 0.21
HDAC6-231ENST00000488905 CARD8Q9Y2G2 431 aa16.39■□□□□ 0.21
HDAC6-231ENST00000488905 ACTL7BQ9Y614 415 aa16.39■□□□□ 0.21
HDAC6-231ENST00000488905 H3BNH8 94 aa16.38■□□□□ 0.21
HDAC6-231ENST00000488905 ZNF195O14628 629 aa16.38■□□□□ 0.21
HDAC6-231ENST00000488905 EFNA2O43921 213 aa16.38■□□□□ 0.21
HDAC6-231ENST00000488905 LAMP1P11279 417 aa16.38■□□□□ 0.21
HDAC6-231ENST00000488905 PRKCAP17252 672 aa16.38■□□□□ 0.21
HDAC6-231ENST00000488905 TP53BP2Q13625 1128 aa16.38■□□□□ 0.21
HDAC6-231ENST00000488905 CAPRIN1Q14444 709 aaKnown RBP16.38■□□□□ 0.21
HDAC6-231ENST00000488905 TSC22D1Q15714 1073 aa16.38■□□□□ 0.21
HDAC6-231ENST00000488905 UGT3A2Q3SY77 523 aa16.38■□□□□ 0.21
HDAC6-231ENST00000488905 XKR7Q5GH72 579 aa16.38■□□□□ 0.21
HDAC6-231ENST00000488905 SFRP5Q5T4F7 317 aa16.38■□□□□ 0.21
HDAC6-231ENST00000488905 BANPQ8N9N5 519 aa16.38■□□□□ 0.21
HDAC6-231ENST00000488905 EIF1ADQ8N9N8 165 aaKnown RBP16.38■□□□□ 0.21
HDAC6-231ENST00000488905 PSMA8Q8TAA3 256 aa16.38■□□□□ 0.21
HDAC6-231ENST00000488905 FBXW5Q969U6 566 aa16.38■□□□□ 0.21
HDAC6-231ENST00000488905 APOPT1Q96IL0 206 aa16.38■□□□□ 0.21
HDAC6-231ENST00000488905 PPP3R2Q96LZ3 170 aa16.38■□□□□ 0.21
HDAC6-231ENST00000488905 HOXD1Q9GZZ0 328 aa16.38■□□□□ 0.21
HDAC6-231ENST00000488905 CXorf36Q9H7Y0 433 aa16.38■□□□□ 0.21
HDAC6-231ENST00000488905 MXRA5Q9NR99 2828 aa16.37■□□□□ 0.21
HDAC6-231ENST00000488905 CLOCKO15516 846 aa16.37■□□□□ 0.21
HDAC6-231ENST00000488905 NPHS1O60500 1241 aa16.37■□□□□ 0.21
HDAC6-231ENST00000488905 SOX30O94993 753 aa16.37■□□□□ 0.21
HDAC6-231ENST00000488905 NTN1O95631 604 aa16.37■□□□□ 0.21
HDAC6-231ENST00000488905 FGF4P08620 206 aa16.37■□□□□ 0.21
HDAC6-231ENST00000488905 KRT16P08779 473 aa16.37■□□□□ 0.21
HDAC6-231ENST00000488905 CCT3P49368 545 aaKnown RBP16.37■□□□□ 0.21
HDAC6-231ENST00000488905 SELENBP1Q13228 472 aa16.37■□□□□ 0.21
HDAC6-231ENST00000488905 TNK1Q13470 666 aa16.37■□□□□ 0.21
HDAC6-231ENST00000488905 PTGR1Q14914 329 aa16.37■□□□□ 0.21
HDAC6-231ENST00000488905 TAB1Q15750 504 aa16.37■□□□□ 0.21
HDAC6-231ENST00000488905 TOMM34Q15785 309 aaPredicted RBP16.37■□□□□ 0.21
HDAC6-231ENST00000488905 NDUFAF6Q330K2 333 aa16.37■□□□□ 0.21
HDAC6-231ENST00000488905 TMEM176BQ3YBM2 270 aaPredicted RBP16.37■□□□□ 0.21
HDAC6-231ENST00000488905 ARL13AQ5H913 290 aaPredicted RBP16.37■□□□□ 0.21
HDAC6-231ENST00000488905 NCMAPQ5T1S8 102 aa16.37■□□□□ 0.21
HDAC6-231ENST00000488905 ZNF619Q8N2I2 560 aa16.37■□□□□ 0.21
HDAC6-231ENST00000488905 ZNF614Q8N883 585 aa16.37■□□□□ 0.21
HDAC6-231ENST00000488905 LILRB1Q8NHL6 650 aaPredicted RBP16.37■□□□□ 0.21
HDAC6-231ENST00000488905 SFXN5Q8TD22 340 aa16.37■□□□□ 0.21
HDAC6-231ENST00000488905 ADAMTS15Q8TE58 950 aa16.37■□□□□ 0.21
HDAC6-231ENST00000488905 OR5P2Q8WZ92 322 aa16.37■□□□□ 0.21
HDAC6-231ENST00000488905 KISS1RQ969F8 398 aaPredicted RBP16.37■□□□□ 0.21
HDAC6-231ENST00000488905 MDFIQ99750 246 aa16.37■□□□□ 0.21
HDAC6-231ENST00000488905 POTEKPQ9BYX7 375 aa16.37■□□□□ 0.21
HDAC6-231ENST00000488905 ESRP2Q9H6T0 727 aaKnown RBP16.37■□□□□ 0.21
HDAC6-231ENST00000488905 NGBQ9NPG2 151 aa16.37■□□□□ 0.21
HDAC6-231ENST00000488905 ATAD3AQ9NVI7 634 aa16.37■□□□□ 0.21
HDAC6-231ENST00000488905 GPATCH2Q9NW75 528 aa16.37■□□□□ 0.21
HDAC6-231ENST00000488905 FAF1Q9UNN5 650 aaPredicted RBP16.37■□□□□ 0.21
HDAC6-231ENST00000488905 TRAF6Q9Y4K3 522 aa16.37■□□□□ 0.21
HDAC6-231ENST00000488905 NPIPB9F8W1W9 429 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 PEX11AO75192 247 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 PRKD3O94806 890 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 C6orf47O95873 294 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 CD3EP07766 207 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 YES1P07947 543 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 SLC7A1P30825 629 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 ALDH3A1P30838 453 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 ATP12AP54707 1039 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 KRTAP1-1Q07627 177 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 VEZF1Q14119 521 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 ETFDHQ16134 617 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 CLEC12BQ2HXU8 276 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 SPDYE7PQ495Y7 208 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms