RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 RNF32Q9H0A6 362 aa13.17□□□□□ -0.3
ABCB1-207ENST00000488737 C20orf141Q9NUB4 165 aa13.17□□□□□ -0.3
ABCB1-207ENST00000488737 EVA1BQ9NVM1 165 aa13.17□□□□□ -0.3
ABCB1-207ENST00000488737 FBXO34Q9NWN3 711 aa13.17□□□□□ -0.3
ABCB1-207ENST00000488737 NDRG2Q9UN36 371 aaKnown RBP13.17□□□□□ -0.3
ABCB1-207ENST00000488737 N6AMT1Q9Y5N5 214 aa13.17□□□□□ -0.3
ABCB1-207ENST00000488737 SHISA3A0PJX4 238 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 SMIM30A4D0T7 59 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 OR5K4A6NMS3 321 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 PRR23D1E9PI22 279 aaPredicted RBP13.16□□□□□ -0.3
ABCB1-207ENST00000488737 IDH3BO43837 385 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 HPGDSO60760 199 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 PRR23D2P0DMB1 279 aaPredicted RBP13.16□□□□□ -0.3
ABCB1-207ENST00000488737 SLC2A2P11168 524 aaPredicted RBP13.16□□□□□ -0.3
ABCB1-207ENST00000488737 DRD1P21728 446 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 F8A1P23610 371 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 MYL9P24844 172 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 RBM34P42696 430 aaKnown RBP13.16□□□□□ -0.3
ABCB1-207ENST00000488737 LSSP48449 732 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 TAS2R43P59537 309 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 FOXK2Q01167 660 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 IFITM2Q01629 132 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.16□□□□□ -0.3
ABCB1-207ENST00000488737 KIAA1324Q6UXG2 1013 aaKnown RBP13.16□□□□□ -0.3
ABCB1-207ENST00000488737 PRSS41Q7RTY9 318 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 GPALPP1Q8IXQ4 340 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 Q8N402 240 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 CSNK1A1LQ8N752 337 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 SLC37A3Q8NCC5 494 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 C19orf18Q8NEA5 215 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 ENKURQ8TC29 256 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 SLC2A12Q8TD20 617 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 KCTD12Q96CX2 325 aaKnown RBP13.16□□□□□ -0.3
ABCB1-207ENST00000488737 AHCYL2Q96HN2 611 aaKnown RBP13.16□□□□□ -0.3
ABCB1-207ENST00000488737 FRMD6Q96NE9 622 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 UBL7Q96S82 380 aaPredicted RBP13.16□□□□□ -0.3
ABCB1-207ENST00000488737 TIMP4Q99727 224 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 S1PR5Q9H228 398 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 MMP28Q9H239 520 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 RNF121Q9H920 327 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 ATP13A2Q9NQ11 1180 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 CPNE7Q9UBL6 633 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 SLC35A3Q9Y2D2 325 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 A0A0B4J2E0 115 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 KIR2DS5A0A0G2JLQ3 304 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 A0A0G2JNG1 304 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 LINC00854A0A1B0GVQ3 168 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 A0A1B0GX12 115 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 DAPL1A0PJW8 107 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 CD8B2A6NJW9 211 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 RIIAD1A6NNX1 92 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 A8MU76 341 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 KIR2DS3K7RE56 304 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 CHP2O43745 196 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 PTP4A3O75365 173 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 TNFP01375 233 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 MT-ND5P03915 603 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 SLC35E2P0CK97 266 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 CD8BP10966 210 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 APEX1P27695 318 aaKnown RBP13.16□□□□□ -0.3
ABCB1-207ENST00000488737 GABRA3P34903 492 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 MAP2K3P46734 347 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 TPMTP51580 245 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 HTR4Q13639 388 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 KIR2DS5Q14953 304 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 EXOSC7Q15024 291 aaKnown RBP13.16□□□□□ -0.3
ABCB1-207ENST00000488737 QPRTQ15274 297 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 ZSWIM7Q19AV6 140 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 ZFP69Q49AA0 526 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 MZT2BQ6NZ67 158 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 TMEFF1Q8IYR6 380 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 TMEM99Q8N816 258 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 CAPSLQ8WWF8 208 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 ANKRD9Q96BM1 317 aaPredicted RBP13.16□□□□□ -0.3
ABCB1-207ENST00000488737 IFT27Q9BW83 186 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 GSDMCQ9BYG8 508 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 ISG20L2Q9H9L3 353 aaKnown RBP13.16□□□□□ -0.3
ABCB1-207ENST00000488737 HAO2Q9NYQ3 351 aa13.16□□□□□ -0.3
ABCB1-207ENST00000488737 NPIPA5A0A0B4J1W7 369 aa13.15□□□□□ -0.3
ABCB1-207ENST00000488737 GXYLT2A0PJZ3 443 aa13.15□□□□□ -0.3
ABCB1-207ENST00000488737 FAM172BPA6NC97 362 aa13.15□□□□□ -0.3
ABCB1-207ENST00000488737 NPIPA7E9PJI5 369 aa13.15□□□□□ -0.3
ABCB1-207ENST00000488737 SGK494L7N484 410 aa13.15□□□□□ -0.3
ABCB1-207ENST00000488737 TFECO14948 347 aaPredicted RBP13.15□□□□□ -0.3
ABCB1-207ENST00000488737 CT62P0C5K7 136 aa13.15□□□□□ -0.3
ABCB1-207ENST00000488737 NPIPA8P0DM63 369 aa13.15□□□□□ -0.3
ABCB1-207ENST00000488737 PRKAR1AP10644 381 aa13.15□□□□□ -0.3
ABCB1-207ENST00000488737 PVRP15151 417 aa13.15□□□□□ -0.3
ABCB1-207ENST00000488737 HLA-DMAP28067 261 aa13.15□□□□□ -0.3
ABCB1-207ENST00000488737 MLLT3P42568 568 aaPredicted RBP13.15□□□□□ -0.3
ABCB1-207ENST00000488737 KIR2DL3P43628 341 aa13.15□□□□□ -0.3
ABCB1-207ENST00000488737 RABIFP47224 123 aa13.15□□□□□ -0.3
ABCB1-207ENST00000488737 PLAURQ03405 335 aa13.15□□□□□ -0.3
ABCB1-207ENST00000488737 POU4F2Q12837 409 aa13.15□□□□□ -0.3
ABCB1-207ENST00000488737 IL18Q14116 193 aa13.15□□□□□ -0.3
ABCB1-207ENST00000488737 RAB30Q15771 203 aa13.15□□□□□ -0.3
ABCB1-207ENST00000488737 TBRG1Q3YBR2 411 aa13.15□□□□□ -0.3
ABCB1-207ENST00000488737 HBMQ6B0K9 141 aa13.15□□□□□ -0.3
ABCB1-207ENST00000488737 FIGNL1Q6PIW4 674 aa13.15□□□□□ -0.3
ABCB1-207ENST00000488737 THSD4Q6ZMP0 1018 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms