RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 RSPH10B2B2RC85 870 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 CDX4O14627 284 aaPredicted RBP3.21□□□□□ -1.9
ITGB1-214ENST00000488427 VENTXO95231 258 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 RSPH10BP0C881 870 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 CCDC192P0DO97 292 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 BTDP43251 543 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 SMSP52788 366 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 HERV-K104P63124 156 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 IL9RQ01113 521 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 PPP1R8Q12972 351 aaKnown RBP3.21□□□□□ -1.9
ITGB1-214ENST00000488427 NME3Q13232 169 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 SGCBQ16585 318 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 HKDC1Q2TB90 917 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 GPAT3Q53EU6 434 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 TMEM270Q6UE05 265 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 CLEC18BQ6UXF7 455 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 PAMR1Q6UXH9 720 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 OR4A16Q8NH70 328 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 ACER1Q8TDN7 264 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 CPXM1Q96SM3 734 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 GPR174Q9BXC1 333 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 MRPL9Q9BYD2 267 aaKnown RBP3.21□□□□□ -1.9
ITGB1-214ENST00000488427 SLITRK2Q9H156 845 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 ABCG4Q9H172 646 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 CXXC4Q9H2H0 198 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 ZNF275Q9NSD4 429 aaPredicted RBP3.21□□□□□ -1.9
ITGB1-214ENST00000488427 EPS15L1Q9UBC2 864 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 ACANP16112 2415 aa3.21□□□□□ -1.9
ITGB1-214ENST00000488427 MYO16Q9Y6X6 1858 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 K7ERI5 159 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 SH2D1BO14796 132 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 BUB1O43683 1085 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 FMO6PO60774 539 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 N4BP1O75113 896 aaKnown RBP3.2□□□□□ -1.9
ITGB1-214ENST00000488427 AKAP3O75969 853 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 PDE5AO76074 875 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 PNPP00491 289 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 GHRP10912 638 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 PVRP15151 417 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 AREGP15514 252 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 UCP1P25874 307 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 CA8P35219 290 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 TNFRSF4P43489 277 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 MEOX2P50222 304 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 METAP1P53582 386 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 CASP9P55211 416 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 NME5P56597 212 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 CD47Q08722 323 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 GK2Q14410 553 aaPredicted RBP3.2□□□□□ -1.9
ITGB1-214ENST00000488427 SLC10A1Q14973 349 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 LTB4RQ15722 352 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 RNF212Q495C1 297 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 GCNT7Q6ZNI0 430 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 PYROXD2Q8N2H3 581 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 CADM2Q8N3J6 435 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 ZNF491Q8N8L2 437 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 MLKLQ8NB16 471 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 GPR137Q96N19 417 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 TSPAN18Q96SJ8 248 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 NACA2Q9H009 215 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 ASB8Q9H765 288 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 HOMER3Q9NSC5 361 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 CELA1Q9UNI1 258 aa3.2□□□□□ -1.9
ITGB1-214ENST00000488427 ZNF256Q9Y2P7 627 aaPredicted RBP3.2□□□□□ -1.9
ITGB1-214ENST00000488427 VWA8A3KMH1 1905 aa3.19□□□□□ -1.9
ITGB1-214ENST00000488427 HELZP42694 1942 aaKnown RBP3.19□□□□□ -1.9
ITGB1-214ENST00000488427 MYH4Q9Y623 1939 aa3.19□□□□□ -1.9
ITGB1-214ENST00000488427 ESPL1Q14674 2120 aa3.19□□□□□ -1.9
ITGB1-214ENST00000488427 CCT8L1PA6NM43 557 aa3.19□□□□□ -1.9
ITGB1-214ENST00000488427 NME2P1O60361 137 aa3.19□□□□□ -1.9
ITGB1-214ENST00000488427 APBB3O95704 486 aa3.19□□□□□ -1.9
ITGB1-214ENST00000488427 B4GALT1P15291 398 aa3.19□□□□□ -1.9
ITGB1-214ENST00000488427 GDF1P27539 372 aa3.19□□□□□ -1.9
ITGB1-214ENST00000488427 HTR4Q13639 388 aa3.19□□□□□ -1.9
ITGB1-214ENST00000488427 SMC1AQ14683 1233 aaKnown RBP3.19□□□□□ -1.9
ITGB1-214ENST00000488427 CCDC57Q2TAC2 916 aa3.19□□□□□ -1.9
ITGB1-214ENST00000488427 FAM219BQ5XKK7 198 aa3.19□□□□□ -1.9
ITGB1-214ENST00000488427 TSEN54Q7Z6J9 526 aaKnown RBP3.19□□□□□ -1.9
ITGB1-214ENST00000488427 FBXO16Q8IX29 292 aaPredicted RBP3.19□□□□□ -1.9
ITGB1-214ENST00000488427 HDDC3Q8N4P3 179 aa3.19□□□□□ -1.9
ITGB1-214ENST00000488427 PTP4A1Q93096 173 aa3.19□□□□□ -1.9
ITGB1-214ENST00000488427 MAGEB18Q96M61 343 aa3.19□□□□□ -1.9
ITGB1-214ENST00000488427 CCT8L2Q96SF2 557 aa3.19□□□□□ -1.9
ITGB1-214ENST00000488427 TEX13BQ9BXU2 312 aa3.19□□□□□ -1.9
ITGB1-214ENST00000488427 YTHDF1Q9BYJ9 559 aaKnown RBP3.19□□□□□ -1.9
ITGB1-214ENST00000488427 CENPMQ9NSP4 180 aa3.19□□□□□ -1.9
ITGB1-214ENST00000488427 PIGVQ9NUD9 493 aa3.19□□□□□ -1.9
ITGB1-214ENST00000488427 HMG20BQ9P0W2 317 aa3.19□□□□□ -1.9
ITGB1-214ENST00000488427 CCPG1Q9ULG6 757 aa3.19□□□□□ -1.9
ITGB1-214ENST00000488427 NDRG2Q9UN36 371 aaKnown RBP3.19□□□□□ -1.9
ITGB1-214ENST00000488427 NTNG1Q9Y2I2 539 aa3.19□□□□□ -1.9
ITGB1-214ENST00000488427 DHRS7Q9Y394 339 aa3.19□□□□□ -1.9
ITGB1-214ENST00000488427 NBEAL2Q6ZNJ1 2754 aa3.19□□□□□ -1.9
ITGB1-214ENST00000488427 COL4A2P08572 1712 aa3.19□□□□□ -1.9
ITGB1-214ENST00000488427 CLUHO75153 1309 aa3.19□□□□□ -1.9
ITGB1-214ENST00000488427 TGP01266 2768 aa3.18□□□□□ -1.9
ITGB1-214ENST00000488427 MYO5AQ9Y4I1 1855 aaKnown RBP3.18□□□□□ -1.9
ITGB1-214ENST00000488427 TRBV2A0A0J9YWF9 115 aa3.18□□□□□ -1.9
ITGB1-214ENST00000488427 SH3PXD2BA1X283 911 aa3.18□□□□□ -1.9
ITGB1-214ENST00000488427 SMIM30A4D0T7 59 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms