RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 OR14I1A6ND48 311 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 CLDN24A6NM45 220 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 PYCARD-AS1I3L0S3 204 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 ADAM10O14672 748 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 BCKDKO14874 412 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 ZIC3O60481 467 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 SLC19A2O60779 497 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 GMNNO75496 209 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 PABPC4LP0CB38 370 aaKnown RBP14.28□□□□□ -0.12
C9orf3-219ENST00000488186 PGCP20142 388 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 RPS4Y1P22090 263 aaKnown RBP14.28□□□□□ -0.12
C9orf3-219ENST00000488186 CALB2P22676 271 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 RYKP34925 604 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 PCGF2P35227 344 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 PGM1P36871 562 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 SLC6A8P48029 635 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 LIPEQ05469 1076 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 GLYR1Q49A26 553 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-219ENST00000488186 MRPL2Q5T653 305 aaKnown RBP14.28□□□□□ -0.12
C9orf3-219ENST00000488186 CBLN3Q6UW01 205 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 ENPP6Q6UWR7 440 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 ARSKQ6UWY0 536 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 CLEC18BQ6UXF7 455 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 PATL1Q86TB9 770 aaKnown RBP14.28□□□□□ -0.12
C9orf3-219ENST00000488186 CALHM3Q86XJ0 350 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 ARMC8Q8IUR7 673 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 SLC15A3Q8IY34 581 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 ZNF440Q8IYI8 595 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 CLEC18CQ8NCF0 446 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 BHLHE22Q8NFJ8 381 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-219ENST00000488186 TNIP2Q8NFZ5 429 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 ZNF563Q8TA94 476 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 ZBTB8AQ96BR9 441 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 ZNF583Q96ND8 569 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 PLSCR2Q9NRY7 297 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 MED17Q9NVC6 651 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 KLHL28Q9NXS3 571 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 DSPPQ9NZW4 1301 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 LRRK2Q5S007 2527 aa14.28□□□□□ -0.12
C9orf3-219ENST00000488186 FAM220BPB1ANY3 271 aa14.27□□□□□ -0.13
C9orf3-219ENST00000488186 LINC01387J3KSC0 135 aa14.27□□□□□ -0.13
C9orf3-219ENST00000488186 M0QX08 132 aa14.27□□□□□ -0.13
C9orf3-219ENST00000488186 ZNHIT1O43257 154 aa14.27□□□□□ -0.13
C9orf3-219ENST00000488186 OIP5O43482 229 aa14.27□□□□□ -0.13
C9orf3-219ENST00000488186 ACTL6AO96019 429 aa14.27□□□□□ -0.13
C9orf3-219ENST00000488186 IFNA14P01570 189 aa14.27□□□□□ -0.13
C9orf3-219ENST00000488186 LINGO3P0C6S8 592 aa14.27□□□□□ -0.13
C9orf3-219ENST00000488186 EIF1P41567 113 aaKnown RBP14.27□□□□□ -0.13
C9orf3-219ENST00000488186 GZMMP51124 257 aa14.27□□□□□ -0.13
C9orf3-219ENST00000488186 EEFSECP57772 596 aaKnown RBP14.27□□□□□ -0.13
C9orf3-219ENST00000488186 SLC25A3Q00325 362 aa14.27□□□□□ -0.13
C9orf3-219ENST00000488186 SKP2Q13309 424 aa14.27□□□□□ -0.13
C9orf3-219ENST00000488186 ZNF836Q6ZNA1 936 aa14.27□□□□□ -0.13
C9orf3-219ENST00000488186 ZNF550Q7Z398 422 aa14.27□□□□□ -0.13
C9orf3-219ENST00000488186 MICU2Q8IYU8 434 aa14.27□□□□□ -0.13
C9orf3-219ENST00000488186 FAM57AQ8TBR7 257 aa14.27□□□□□ -0.13
C9orf3-219ENST00000488186 GPR119Q8TDV5 335 aa14.27□□□□□ -0.13
C9orf3-219ENST00000488186 TMEM234Q8WY98 164 aa14.27□□□□□ -0.13
C9orf3-219ENST00000488186 CNOT9Q92600 299 aaKnown RBP14.27□□□□□ -0.13
C9orf3-219ENST00000488186 KCTD14Q9BQ13 255 aaPredicted RBP14.27□□□□□ -0.13
C9orf3-219ENST00000488186 ALG2Q9H553 416 aa14.27□□□□□ -0.13
C9orf3-219ENST00000488186 EXOSC3Q9NQT5 275 aaKnown RBP14.27□□□□□ -0.13
C9orf3-219ENST00000488186 TNFRSF10DQ9UBN6 386 aa14.27□□□□□ -0.13
C9orf3-219ENST00000488186 SH3BGRL2Q9UJC5 107 aa14.27□□□□□ -0.13
C9orf3-219ENST00000488186 ICAM5Q9UMF0 924 aa14.27□□□□□ -0.13
C9orf3-219ENST00000488186 GPC6Q9Y625 555 aaPredicted RBP14.27□□□□□ -0.13
C9orf3-219ENST00000488186 DNAJC13O75165 2243 aa14.27□□□□□ -0.13
C9orf3-219ENST00000488186 USP9XQ93008 2570 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-219ENST00000488186 NME4O00746 187 aa14.26□□□□□ -0.13
C9orf3-219ENST00000488186 DNAJA2O60884 412 aa14.26□□□□□ -0.13
C9orf3-219ENST00000488186 GP1BBP13224 206 aa14.26□□□□□ -0.13
C9orf3-219ENST00000488186 BMP7P18075 431 aa14.26□□□□□ -0.13
C9orf3-219ENST00000488186 CHMP24386 653 aa14.26□□□□□ -0.13
C9orf3-219ENST00000488186 PRKAR1BP31321 381 aa14.26□□□□□ -0.13
C9orf3-219ENST00000488186 UQCRFS1P47985 274 aa14.26□□□□□ -0.13
C9orf3-219ENST00000488186 COPZ1P61923 177 aa14.26□□□□□ -0.13
C9orf3-219ENST00000488186 VEZF1Q14119 521 aa14.26□□□□□ -0.13
C9orf3-219ENST00000488186 QPRTQ15274 297 aa14.26□□□□□ -0.13
C9orf3-219ENST00000488186 GXYLT1Q4G148 440 aa14.26□□□□□ -0.13
C9orf3-219ENST00000488186 C8orf82Q6P1X6 216 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-219ENST00000488186 ZNF585AQ6P3V2 769 aa14.26□□□□□ -0.13
C9orf3-219ENST00000488186 PM20D2Q8IYS1 436 aa14.26□□□□□ -0.13
C9orf3-219ENST00000488186 PGAM4Q8N0Y7 254 aa14.26□□□□□ -0.13
C9orf3-219ENST00000488186 EID3Q8N140 333 aa14.26□□□□□ -0.13
C9orf3-219ENST00000488186 OR5M9Q8NGP3 310 aa14.26□□□□□ -0.13
C9orf3-219ENST00000488186 OR5M1Q8NGP8 315 aa14.26□□□□□ -0.13
C9orf3-219ENST00000488186 RASSF5Q8WWW0 418 aa14.26□□□□□ -0.13
C9orf3-219ENST00000488186 CDRT15Q96T59 188 aa14.26□□□□□ -0.13
C9orf3-219ENST00000488186 RLIMQ9NVW2 624 aa14.26□□□□□ -0.13
C9orf3-219ENST00000488186 SPRR3Q9UBC9 169 aa14.26□□□□□ -0.13
C9orf3-219ENST00000488186 CAMK2AQ9UQM7 478 aa14.26□□□□□ -0.13
C9orf3-219ENST00000488186 CDHR4A6H8M9 788 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 CFAP73A6NFT4 308 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 B4DXG7 233 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 H3BML4 177 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 PEPDP12955 493 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 POU3F2P20265 443 aaPredicted RBP14.25□□□□□ -0.13
C9orf3-219ENST00000488186 ME2P23368 584 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 EEF1A1P68104 462 aaKnown RBP14.25□□□□□ -0.13
C9orf3-219ENST00000488186 CBX1P83916 185 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms