RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.06□□□□□ -2.08
CCDC66-221ENST00000487739 GPRASP1Q5JY77 1395 aa2.06□□□□□ -2.08
CCDC66-221ENST00000487739 RLFQ13129 1914 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 IGHV1OR15-1A0A075B7D0 117 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 RNF103-CHMP3A0A140T963 221 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 PSMB11A5LHX3 300 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 NKX2-6A6NCS4 301 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 H3BTX0 84 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 TM9SF1O15321 606 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 SSX5O60225 188 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 NDUFA7O95182 113 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 IGLV3-19P01714 112 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 CA3P07451 260 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 RCC1P18754 421 aaPredicted RBP2.05□□□□□ -2.08
CCDC66-221ENST00000487739 RPL4P36578 427 aaKnown RBP2.05□□□□□ -2.08
CCDC66-221ENST00000487739 LONP1P36776 959 aaKnown RBP2.05□□□□□ -2.08
CCDC66-221ENST00000487739 ZNF136P52737 540 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 UNC119Q13432 240 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 PKN2Q16513 984 aaKnown RBP2.05□□□□□ -2.08
CCDC66-221ENST00000487739 ADPRMQ3LIE5 342 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 CFAP221Q4G0U5 840 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 RAET1GQ6H3X3 334 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 ARSKQ6UWY0 536 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 DNM1P46Q6ZS02 220 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 CYS1Q717R9 158 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 C17orf82Q86X59 251 aaPredicted RBP2.05□□□□□ -2.08
CCDC66-221ENST00000487739 FAM71CQ8NEG0 241 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 OR8H1Q8NGG4 311 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 ELMO2Q96JJ3 720 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 FAM111AQ96PZ2 611 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 TBC1D10AQ9BXI6 508 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 RAB17Q9H0T7 212 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 HSD3B7Q9H2F3 369 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 ACTR8Q9H981 624 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 GPN2Q9H9Y4 310 aaPredicted RBP2.05□□□□□ -2.08
CCDC66-221ENST00000487739 FANCFQ9NPI8 374 aa2.05□□□□□ -2.08
CCDC66-221ENST00000487739 RBM28Q9NW13 759 aaKnown RBP2.05□□□□□ -2.08
CCDC66-221ENST00000487739 PIN4Q9Y237 131 aaKnown RBP2.05□□□□□ -2.08
CCDC66-221ENST00000487739 SAGE2PA6NJ88 616 aa2.04□□□□□ -2.08
CCDC66-221ENST00000487739 WASHC1A8K0Z3 465 aa2.04□□□□□ -2.08
CCDC66-221ENST00000487739 WASH3PC4AMC7 463 aa2.04□□□□□ -2.08
CCDC66-221ENST00000487739 CUX2O14529 1486 aa2.04□□□□□ -2.08
CCDC66-221ENST00000487739 EFNA2O43921 213 aa2.04□□□□□ -2.08
CCDC66-221ENST00000487739 CHRNA1P02708 482 aa2.04□□□□□ -2.08
CCDC66-221ENST00000487739 PCCAP05165 728 aaPredicted RBP2.04□□□□□ -2.08
CCDC66-221ENST00000487739 XRCC1P18887 633 aaPredicted RBP2.04□□□□□ -2.08
CCDC66-221ENST00000487739 CYLC1P35663 651 aaPredicted RBP2.04□□□□□ -2.08
CCDC66-221ENST00000487739 CAMLGP49069 296 aa2.04□□□□□ -2.08
CCDC66-221ENST00000487739 DHPSP49366 369 aaPredicted RBP2.04□□□□□ -2.08
CCDC66-221ENST00000487739 NOVA1P51513 510 aaKnown RBP2.04□□□□□ -2.08
CCDC66-221ENST00000487739 APOC4P55056 127 aa2.04□□□□□ -2.08
CCDC66-221ENST00000487739 LIM2P55344 173 aa2.04□□□□□ -2.08
CCDC66-221ENST00000487739 MRPS11P82912 194 aaKnown RBP2.04□□□□□ -2.08
CCDC66-221ENST00000487739 IL1RL1Q01638 556 aa2.04□□□□□ -2.08
CCDC66-221ENST00000487739 ZNF154Q13106 437 aa2.04□□□□□ -2.08
CCDC66-221ENST00000487739 CDKN3Q16667 212 aa2.04□□□□□ -2.08
CCDC66-221ENST00000487739 CYBRD1Q53TN4 286 aa2.04□□□□□ -2.08
CCDC66-221ENST00000487739 WASH2PQ6VEQ5 465 aa2.04□□□□□ -2.08
CCDC66-221ENST00000487739 STAC2Q6ZMT1 411 aa2.04□□□□□ -2.08
CCDC66-221ENST00000487739 SKA3Q8IX90 412 aa2.04□□□□□ -2.08
CCDC66-221ENST00000487739 TMEM252Q8N6L7 170 aa2.04□□□□□ -2.08
CCDC66-221ENST00000487739 MRPL43Q8N983 215 aaKnown RBP2.04□□□□□ -2.08
CCDC66-221ENST00000487739 OR2T33Q8NG76 320 aa2.04□□□□□ -2.08
CCDC66-221ENST00000487739 OR52B4Q8NGK2 314 aa2.04□□□□□ -2.08
CCDC66-221ENST00000487739 FAM210BQ96KR6 192 aa2.04□□□□□ -2.08
CCDC66-221ENST00000487739 TMEM121Q9BTD3 319 aa2.04□□□□□ -2.08
CCDC66-221ENST00000487739 WRAP53Q9BUR4 548 aaKnown RBP2.04□□□□□ -2.08
CCDC66-221ENST00000487739 RPAP3Q9H6T3 665 aaPredicted RBP2.04□□□□□ -2.08
CCDC66-221ENST00000487739 NGBQ9NPG2 151 aa2.04□□□□□ -2.08
CCDC66-221ENST00000487739 PRPF19Q9UMS4 504 aaKnown RBP2.04□□□□□ -2.08
CCDC66-221ENST00000487739 FOXJ3Q9UPW0 622 aa2.04□□□□□ -2.08
CCDC66-221ENST00000487739 CLCA3PQ9Y6N3 262 aa2.04□□□□□ -2.08
CCDC66-221ENST00000487739 MTCL1Q9Y4B5 1905 aaKnown RBP2.03□□□□□ -2.08
CCDC66-221ENST00000487739 A0A0U1RQV5 110 aa2.03□□□□□ -2.08
CCDC66-221ENST00000487739 FAM230AA0A1W2PPH8 454 aa2.03□□□□□ -2.08
CCDC66-221ENST00000487739 TMEM150BA6NC51 233 aa2.03□□□□□ -2.08
CCDC66-221ENST00000487739 FAM74A7A6NL05 159 aa2.03□□□□□ -2.08
CCDC66-221ENST00000487739 LRRC30A6NM36 301 aa2.03□□□□□ -2.08
CCDC66-221ENST00000487739 A8MUA0 341 aa2.03□□□□□ -2.08
CCDC66-221ENST00000487739 RASGRF2O14827 1237 aa2.03□□□□□ -2.08
CCDC66-221ENST00000487739 ZNF264O43296 627 aa2.03□□□□□ -2.08
CCDC66-221ENST00000487739 RIPK2O43353 540 aa2.03□□□□□ -2.08
CCDC66-221ENST00000487739 TOM1L1O75674 476 aa2.03□□□□□ -2.08
CCDC66-221ENST00000487739 RRASP10301 218 aa2.03□□□□□ -2.08
CCDC66-221ENST00000487739 PAICSP22234 425 aaKnown RBP2.03□□□□□ -2.08
CCDC66-221ENST00000487739 HPDP32754 393 aaPredicted RBP2.03□□□□□ -2.08
CCDC66-221ENST00000487739 GCKP35557 465 aa2.03□□□□□ -2.08
CCDC66-221ENST00000487739 STARP49675 285 aa2.03□□□□□ -2.08
CCDC66-221ENST00000487739 RND3P61587 244 aa2.03□□□□□ -2.08
CCDC66-221ENST00000487739 MOBPQ13875 183 aa2.03□□□□□ -2.08
CCDC66-221ENST00000487739 GGTLC2Q14390 218 aa2.03□□□□□ -2.08
CCDC66-221ENST00000487739 FAM74A3Q4VXF1 159 aa2.03□□□□□ -2.08
CCDC66-221ENST00000487739 PARP10Q53GL7 1025 aa2.03□□□□□ -2.08
CCDC66-221ENST00000487739 FAM120AOSQ5T036 256 aa2.03□□□□□ -2.08
CCDC66-221ENST00000487739 KPRPQ5T749 579 aaPredicted RBP2.03□□□□□ -2.08
CCDC66-221ENST00000487739 FAM71E1Q6IPT2 247 aa2.03□□□□□ -2.08
CCDC66-221ENST00000487739 CNSTQ6PJW8 725 aa2.03□□□□□ -2.08
CCDC66-221ENST00000487739 RBM43Q6ZSC3 357 aaKnown RBP2.03□□□□□ -2.08
CCDC66-221ENST00000487739 ABHD12BQ7Z5M8 362 aaPredicted RBP2.03□□□□□ -2.08
CCDC66-221ENST00000487739 VPS36Q86VN1 386 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms