RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-241	ENST00000487169	FAM71F1	Q96KD3	344 aa	Predicted RBP	12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	SLC6A18	Q96N87	628 aa		12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	LMF1	Q96S06	567 aa		12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	USP22	Q9UPT9	525 aa		12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	POM121B	A6NF01	834 aa		12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	SYT7	O43581	403 aa		12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	IFNA7	P01567	189 aa		12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	ITGB8	P26012	769 aa		12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	UGT2B10	P36537	528 aa		12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	VASP	P50552	380 aa	Predicted RBP	12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	ART1	P52961	327 aa		12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	TMEM52B	Q4KMG9	183 aa		12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	ENTPD8	Q5MY95	495 aa		12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	MRPL2	Q5T653	305 aa	Known RBP	12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	BCL2L15	Q5TBC7	163 aa		12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	TRIM46	Q7Z4K8	759 aa		12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	OR2T11	Q8NH01	316 aa		12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	SLC38A5	Q8WUX1	472 aa		12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	ATOH1	Q92858	354 aa	Predicted RBP	12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	QRSL1	Q9H0R6	528 aa	Known RBP	12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	C1GALT1	Q9NS00	363 aa		12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	NME7	Q9Y5B8	376 aa		12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	FTCDNL1	E5RQL4	147 aa		12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169		K7ESM1	405 aa		12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	UBFD1	O14562	309 aa	Known RBP	12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	ANKRD28	O15084	1053 aa		12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	ZP2	Q05996	745 aa		12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	KEAP1	Q14145	624 aa		12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	HENMT1	Q5T8I9	393 aa	Known RBP	12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	OTUD1	Q5VV17	481 aa	Predicted RBP	12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	ZNF431	Q8TF32	576 aa	Predicted RBP	12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	SPRYD4	Q8WW59	207 aa	Predicted RBP	12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	CPPED1	Q9BRF8	314 aa	Predicted RBP	12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	PLEKHM1	Q9Y4G2	1056 aa		12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	ALG5	Q9Y673	324 aa		12.51	□□□□□ -0.41
HDLBP-241	ENST00000487169	SIGLEC6	O43699	453 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	GALR3	O60755	368 aa	Predicted RBP	12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	XKRX	Q6PP77	449 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	GALNT11	Q8NCW6	608 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	ZNF597	Q96LX8	424 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	DDX31	Q9H8H2	851 aa	Known RBP	12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	MBNL1	Q9NR56	388 aa	Known RBP	12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	INIP	Q9NRY2	104 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	GMPR2	Q9P2T1	348 aa	Known RBP	12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	TRAV27	A0A087WT01	109 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	HMX2	A2RU54	273 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169		A8MV72	311 aa	Predicted RBP	12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169		H0Y8X5	98 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	SLC16A7	O60669	478 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	IGLV3-25	P01717	112 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	CD63	P08962	238 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	MTHFD2	P13995	350 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	AMY2B	P19961	511 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	CR2	P20023	1033 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	POLR2I	P36954	125 aa	Known RBP	12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	EEF1A1	P68104	462 aa	Known RBP	12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	CSNK1G2	P78368	415 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	ZMYND11	Q15326	602 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	CCBE1	Q6UXH8	406 aa	Predicted RBP	12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	PLPP6	Q8IY26	295 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	B3GNT7	Q8NFL0	401 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	ULBP3	Q9BZM4	244 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	FN3K	Q9H479	309 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	WNK3	Q9BYP7	1800 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	SFTPB	P07988	381 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	FURIN	P09958	794 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	TNFRSF17	Q02223	184 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	LEXM	Q3ZCV2	418 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	PGM2L1	Q6PCE3	622 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	TMEM207	Q6UWW9	146 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	SSX6	Q7RTT6	188 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	NPRL2	Q8WTW4	380 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	PHF7	Q9BWX1	381 aa	Predicted RBP	12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	C1QTNF2	Q9BXJ5	285 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	GAREM1	Q9H706	876 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169	HIF3A	Q9Y2N7	669 aa		12.5	□□□□□ -0.41
HDLBP-241	ENST00000487169		A0A1W2PQL4	384 aa	Predicted RBP	12.49	□□□□□ -0.41
HDLBP-241	ENST00000487169	ZNF850	A8MQ14	1090 aa		12.49	□□□□□ -0.41
HDLBP-241	ENST00000487169	RAB38	P57729	211 aa		12.49	□□□□□ -0.41
HDLBP-241	ENST00000487169	DCAF7	P61962	342 aa		12.49	□□□□□ -0.41
HDLBP-241	ENST00000487169	OR1Q1	Q15612	314 aa		12.49	□□□□□ -0.41
HDLBP-241	ENST00000487169	METRNL	Q641Q3	311 aa		12.49	□□□□□ -0.41
HDLBP-241	ENST00000487169	GPR148	Q8TDV2	347 aa		12.49	□□□□□ -0.41
HDLBP-241	ENST00000487169	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	12.49	□□□□□ -0.41
HDLBP-241	ENST00000487169	CDH20	Q9HBT6	801 aa		12.49	□□□□□ -0.41
HDLBP-241	ENST00000487169	THSD1	Q9NS62	852 aa		12.49	□□□□□ -0.41
HDLBP-241	ENST00000487169	MRPL15	Q9P015	296 aa	Known RBP	12.49	□□□□□ -0.41
HDLBP-241	ENST00000487169	MCTS1	Q9ULC4	181 aa	Known RBP	12.49	□□□□□ -0.41
HDLBP-241	ENST00000487169	CACNA1E	Q15878	2313 aa		12.49	□□□□□ -0.41
HDLBP-241	ENST00000487169	TRAV18	A0A075B6X5	111 aa		12.49	□□□□□ -0.41
HDLBP-241	ENST00000487169		A6NIZ1	184 aa		12.49	□□□□□ -0.41
HDLBP-241	ENST00000487169	TOX	O94900	526 aa		12.49	□□□□□ -0.41
HDLBP-241	ENST00000487169	B3GALT4	O96024	378 aa		12.49	□□□□□ -0.41
HDLBP-241	ENST00000487169	HRG	P04196	525 aa		12.49	□□□□□ -0.41
HDLBP-241	ENST00000487169	MMP2	P08253	660 aa		12.49	□□□□□ -0.41
HDLBP-241	ENST00000487169	CD27	P26842	260 aa		12.49	□□□□□ -0.41
HDLBP-241	ENST00000487169	C21orf33	P30042	268 aa	Predicted RBP	12.49	□□□□□ -0.41
HDLBP-241	ENST00000487169	RAP1B	P61224	184 aa		12.49	□□□□□ -0.41
HDLBP-241	ENST00000487169	RAP1A	P62834	184 aa		12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms