RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 GATSQ8NAP1 163 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 B4GALNT2Q8NHY0 566 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 GPR151Q8TDV0 419 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 ARL8AQ96BM9 186 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 SH3YL1Q96HL8 342 aaPredicted RBP6.72□□□□□ -1.33
PDPN-205ENST00000487038 FOXN4Q96NZ1 517 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 OSBPL9Q96SU4 736 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 VRK1Q99986 396 aaPredicted RBP6.72□□□□□ -1.33
PDPN-205ENST00000487038 RAB1BQ9H0U4 201 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 CXorf36Q9H7Y0 433 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 FARSBQ9NSD9 589 aaKnown RBP6.72□□□□□ -1.33
PDPN-205ENST00000487038 TAS2R16Q9NYV7 291 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 PCTPQ9UKL6 214 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 PCDHB10Q9UN67 800 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 AMDHD2Q9Y303 409 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 TRAF6Q9Y4K3 522 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 SLC25A15Q9Y619 301 aa6.72□□□□□ -1.33
PDPN-205ENST00000487038 GPC6Q9Y625 555 aaPredicted RBP6.72□□□□□ -1.33
PDPN-205ENST00000487038 IGHV3-15A0A0B4J1V0 119 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 NPIPA5A0A0B4J1W7 369 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 A0A1W2PQD3 144 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 LRP5LA4QPB2 252 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 MYO1GB0I1T2 1018 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 NPIPA7E9PJI5 369 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 UPK1AO00322 258 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 EIF3HO15372 352 aaKnown RBP eCLIP6.71□□□□□ -1.34
PDPN-205ENST00000487038 CYTIPO60759 359 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 SMIM24O75264 130 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 HSPA4LO95757 839 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 KRT6AP02538 564 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 KRT6BP04259 564 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 TACSTD2P09758 323 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 IFI6P09912 130 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 LINGO3P0C6S8 592 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 NPIPA8P0DM63 369 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 DDCP20711 480 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 TYK2P29597 1187 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 LCN1P31025 176 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 TIA1P31483 386 aaKnown RBP eCLIP6.71□□□□□ -1.34
PDPN-205ENST00000487038 STX2P32856 288 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 GABRA3P34903 492 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 KRT6CP48668 564 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 PPOXP50336 477 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 CDH15P55291 814 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 HILS1P60008 231 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 LGALS3BPQ08380 585 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 ACSM2AQ08AH3 577 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 CALCOCO2Q13137 446 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 SWI5Q1ZZU3 235 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 GLE1Q53GS7 698 aaKnown RBP6.71□□□□□ -1.34
PDPN-205ENST00000487038 FBXW9Q5XUX1 488 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 ACSM2BQ68CK6 577 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 C3orf33Q6P1S2 294 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 KLHL24Q6TFL4 600 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 SHISA2Q6UWI4 295 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 USP43Q70EL4 1123 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 IKBIPQ70UQ0 350 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 MTERF4Q7Z6M4 381 aaKnown RBP6.71□□□□□ -1.34
PDPN-205ENST00000487038 C17orf78Q8N4C9 275 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 LRRC17Q8N6Y2 441 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 POC1BQ8TC44 478 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 PIK3R3Q92569 461 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 APH1AQ96BI3 265 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 PHF21BQ96EK2 531 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 NPAS1Q99742 590 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 KCNS3Q9BQ31 491 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 SOX7Q9BT81 388 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 TRIM31Q9BZY9 425 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 IQCGQ9H095 443 aaKnown RBP6.71□□□□□ -1.34
PDPN-205ENST00000487038 COQ10BQ9H8M1 238 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 EQTNQ9NQ60 294 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 ASB6Q9NWX5 421 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 GRIP1Q9Y3R0 1128 aa6.71□□□□□ -1.34
PDPN-205ENST00000487038 A0A1W2PR80 420 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 B4DSR2 109 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 B9A039 149 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 ATP6V1G2-DDX39BF2Z307 99 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 H3BNH8 94 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 ZNF195O14628 629 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 PDE5AO76074 875 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 WNT11O96014 354 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 C2P06681 752 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 CTAGE8P0CG41 777 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 PRPS2P11908 318 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 DDX5P17844 614 aaKnown RBP6.7□□□□□ -1.34
PDPN-205ENST00000487038 GIFP27352 417 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 SHC1P29353 583 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 SERPINB4P48594 390 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 PRIM2P49643 509 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 SERPINB8P50452 374 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 P2RX1P51575 399 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 SUMO3P55854 103 aaPredicted RBP6.7□□□□□ -1.34
PDPN-205ENST00000487038 CSNK2A1P68400 391 aaPredicted RBP6.7□□□□□ -1.34
PDPN-205ENST00000487038 ZNF763Q0D2J5 394 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 TMEM176BQ3YBM2 270 aaPredicted RBP6.7□□□□□ -1.34
PDPN-205ENST00000487038 AWAT1Q58HT5 328 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 TECRLQ5HYJ1 363 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 C3orf62Q6ZUJ4 267 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 SZRD1Q7Z422 152 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 PEG10Q86TG7 708 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms