RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 UBQLN3Q9H347 655 aa10.36□□□□□ -0.75
NUP50-216ENST00000486184 ZDHHC11Q9H8X9 412 aa10.36□□□□□ -0.75
NUP50-216ENST00000486184 EXOSC3Q9NQT5 275 aaKnown RBP10.36□□□□□ -0.75
NUP50-216ENST00000486184 ADPRHL2Q9NX46 363 aa10.36□□□□□ -0.75
NUP50-216ENST00000486184 TAS2R10Q9NYW0 307 aa10.36□□□□□ -0.75
NUP50-216ENST00000486184 PRPF19Q9UMS4 504 aaKnown RBP10.36□□□□□ -0.75
NUP50-216ENST00000486184 USP22Q9UPT9 525 aa10.36□□□□□ -0.75
NUP50-216ENST00000486184 VDAC3Q9Y277 283 aa10.36□□□□□ -0.75
NUP50-216ENST00000486184 SVILO95425 2214 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 SHANK1Q9Y566 2161 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 CDHR4A6H8M9 788 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 CLDN24A6NM45 220 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 CXCR6O00574 342 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 HCN1O60741 890 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 CELA3AP09093 270 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 LINGO3P0C6S8 592 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 RYKP34925 604 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 CPOXP36551 454 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 PCBP3P57721 371 aaKnown RBP10.35□□□□□ -0.75
NUP50-216ENST00000486184 COPZ1P61923 177 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 BNIP1Q12981 228 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 SKP2Q13309 424 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 CMPK2Q5EBM0 449 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 WIPI1Q5MNZ9 446 aaPredicted RBP10.35□□□□□ -0.75
NUP50-216ENST00000486184 ZNF324BQ6AW86 544 aaPredicted RBP10.35□□□□□ -0.75
NUP50-216ENST00000486184 ARHGAP11AQ6P4F7 1023 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 DHRS4L2Q6PKH6 230 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 CBLN3Q6UW01 205 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 CCDC80Q76M96 950 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 ZNF550Q7Z398 422 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 YRDCQ86U90 279 aaKnown RBP10.35□□□□□ -0.75
NUP50-216ENST00000486184 SIAH3Q8IW03 269 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 TMEM234Q8WY98 164 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 LZICQ8WZA0 190 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 PROX1Q92786 737 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 MCUR1Q96AQ8 359 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 ZBTB8AQ96BR9 441 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 SFXN2Q96NB2 322 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 SLX1AQ9BQ83 275 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 PIGQQ9BRB3 760 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 PINK1Q9BXM7 581 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 OR2B2Q9GZK3 357 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 SLC6A15Q9H2J7 730 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 EVA1AQ9H8M9 152 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 ACKR4Q9NPB9 350 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 DNAJB12Q9NXW2 375 aaKnown RBP10.35□□□□□ -0.75
NUP50-216ENST00000486184 TAS2R1Q9NYW7 299 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 MAGEL2Q9UJ55 1249 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 PACSIN3Q9UKS6 424 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 BAG5Q9UL15 447 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 ICAM5Q9UMF0 924 aa10.35□□□□□ -0.75
NUP50-216ENST00000486184 RPH3AQ9Y2J0 694 aaPredicted RBP10.35□□□□□ -0.75
NUP50-216ENST00000486184 MRPS18CQ9Y3D5 142 aaKnown RBP10.35□□□□□ -0.75
NUP50-216ENST00000486184 ZNF407Q9C0G0 2248 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 CHD6Q8TD26 2715 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 CFAP73A6NFT4 308 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 ADAM10O14672 748 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 OIP5O43482 229 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 SUSD5O60279 629 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 MFN2O95140 757 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 ZNF682O95780 498 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 HSD17B1P14061 328 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 ABOP16442 354 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 GGT1P19440 569 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 HTR1EP28566 365 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 KDELR2P33947 212 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 EIF1P41567 113 aaKnown RBP10.34□□□□□ -0.75
NUP50-216ENST00000486184 TDGF1P3P51864 188 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 RGS8P57771 180 aaPredicted RBP10.34□□□□□ -0.75
NUP50-216ENST00000486184 EEF1A1P68104 462 aaKnown RBP10.34□□□□□ -0.75
NUP50-216ENST00000486184 DMTNQ08495 405 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 BNIP2Q12982 314 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 GLYR1Q49A26 553 aaPredicted RBP10.34□□□□□ -0.75
NUP50-216ENST00000486184 AAGABQ6PD74 315 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 C6orf89Q6UWU4 347 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 ARSKQ6UWY0 536 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 TRILQ7L0X0 811 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 ZNF605Q86T29 641 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 RANBP3LQ86VV4 465 aaPredicted RBP10.34□□□□□ -0.75
NUP50-216ENST00000486184 SPPL2CQ8IUH8 684 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 GRAMD2AQ8IUY3 354 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 SMYD1Q8NB12 490 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 FAM156AQ8NDB6 213 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 ST6GALNAC3Q8NDV1 305 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 FAM71CQ8NEG0 241 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 NEIL3Q8TAT5 605 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 CNOT9Q92600 299 aaKnown RBP10.34□□□□□ -0.75
NUP50-216ENST00000486184 SARAFQ96BY9 339 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 ARSGQ96EG1 525 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 RNF145Q96MT1 663 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 BTBD10Q9BSF8 475 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 THTPAQ9BU02 230 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 MED17Q9NVC6 651 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 RLIMQ9NVW2 624 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 STOML1Q9UBI4 398 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 RPS6KB2Q9UBS0 482 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 EGFL7Q9UHF1 273 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 RPS6KA6Q9UK32 745 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 HRH3Q9Y5N1 445 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 LIPGQ9Y5X9 500 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms