RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 FAM168AQ92567 244 aa16.98■□□□□ 0.31
CHRD-216ENST00000486066 REXO5Q96IC2 774 aaKnown RBP16.98■□□□□ 0.31
CHRD-216ENST00000486066 RAB17Q9H0T7 212 aa16.98■□□□□ 0.31
CHRD-216ENST00000486066 EQTNQ9NQ60 294 aa16.98■□□□□ 0.31
CHRD-216ENST00000486066 UBQLN4Q9NRR5 601 aa16.98■□□□□ 0.31
CHRD-216ENST00000486066 ICAM5Q9UMF0 924 aa16.98■□□□□ 0.31
CHRD-216ENST00000486066 KIF2AO00139 706 aaPredicted RBP16.97■□□□□ 0.31
CHRD-216ENST00000486066 IMPDH1P20839 514 aa16.97■□□□□ 0.31
CHRD-216ENST00000486066 USF1P22415 310 aaPredicted RBP16.97■□□□□ 0.31
CHRD-216ENST00000486066 SERPINB9P50453 376 aa16.97■□□□□ 0.31
CHRD-216ENST00000486066 PKNOX1P55347 436 aa16.97■□□□□ 0.31
CHRD-216ENST00000486066 RAC3P60763 192 aa16.97■□□□□ 0.31
CHRD-216ENST00000486066 BTKQ06187 659 aa16.97■□□□□ 0.31
CHRD-216ENST00000486066 LCP2Q13094 533 aa16.97■□□□□ 0.31
CHRD-216ENST00000486066 STK11Q15831 433 aa16.97■□□□□ 0.31
CHRD-216ENST00000486066 VPS26BQ4G0F5 336 aa16.97■□□□□ 0.31
CHRD-216ENST00000486066 SLC25A53Q5H9E4 307 aa16.97■□□□□ 0.31
CHRD-216ENST00000486066 FAM120AOSQ5T036 256 aa16.97■□□□□ 0.31
CHRD-216ENST00000486066 CBLN3Q6UW01 205 aa16.97■□□□□ 0.31
CHRD-216ENST00000486066 TRIM46Q7Z4K8 759 aa16.97■□□□□ 0.31
CHRD-216ENST00000486066 MUC15Q8N387 334 aa16.97■□□□□ 0.31
CHRD-216ENST00000486066 ZNF433Q8N7K0 673 aaPredicted RBP16.97■□□□□ 0.31
CHRD-216ENST00000486066 FBXO27Q8NI29 283 aa16.97■□□□□ 0.31
CHRD-216ENST00000486066 DCAKDQ8WVC6 231 aa16.97■□□□□ 0.31
CHRD-216ENST00000486066 L3HYPDHQ96EM0 354 aa16.97■□□□□ 0.31
CHRD-216ENST00000486066 EGLN2Q96KS0 407 aa16.97■□□□□ 0.31
CHRD-216ENST00000486066 PAFAH2Q99487 392 aa16.97■□□□□ 0.31
CHRD-216ENST00000486066 KLHL9Q9P2J3 617 aa16.97■□□□□ 0.31
CHRD-216ENST00000486066 ZNF180Q9UJW8 692 aa16.97■□□□□ 0.31
CHRD-216ENST00000486066 CCL27Q9Y4X3 112 aa16.97■□□□□ 0.31
CHRD-216ENST00000486066 ZNF724A8MTY0 619 aa16.96■□□□□ 0.31
CHRD-216ENST00000486066 UBFD1O14562 309 aaKnown RBP16.96■□□□□ 0.31
CHRD-216ENST00000486066 SMAD9O15198 467 aaKnown RBP16.96■□□□□ 0.31
CHRD-216ENST00000486066 CYTIPO60759 359 aa16.96■□□□□ 0.31
CHRD-216ENST00000486066 PGRP06401 933 aa16.96■□□□□ 0.31
CHRD-216ENST00000486066 PYGBP11216 843 aa16.96■□□□□ 0.31
CHRD-216ENST00000486066 GGT1P19440 569 aa16.96■□□□□ 0.31
CHRD-216ENST00000486066 PHBP35232 272 aa16.96■□□□□ 0.31
CHRD-216ENST00000486066 GZMKP49863 264 aa16.96■□□□□ 0.31
CHRD-216ENST00000486066 LSM11P83369 360 aaKnown RBP eCLIP16.96■□□□□ 0.312e-7■□□□□ 9.9
CHRD-216ENST00000486066 KIAA0040Q15053 153 aa16.96■□□□□ 0.31
CHRD-216ENST00000486066 RAB35Q15286 201 aa16.96■□□□□ 0.31
CHRD-216ENST00000486066 TOMM34Q15785 309 aaPredicted RBP16.96■□□□□ 0.31
CHRD-216ENST00000486066 TMEM176BQ3YBM2 270 aaPredicted RBP16.96■□□□□ 0.31
CHRD-216ENST00000486066 ARL13AQ5H913 290 aaPredicted RBP16.96■□□□□ 0.31
CHRD-216ENST00000486066 IL17RELQ6ZVW7 336 aa16.96■□□□□ 0.31
CHRD-216ENST00000486066 MUCL1Q96DR8 90 aa16.96■□□□□ 0.31
CHRD-216ENST00000486066 PRR14Q9BWN1 585 aa16.96■□□□□ 0.31
CHRD-216ENST00000486066 TMEM216Q9P0N5 145 aa16.96■□□□□ 0.31
CHRD-216ENST00000486066 MGAT4BQ9UQ53 548 aa16.96■□□□□ 0.31
CHRD-216ENST00000486066 POLR3HQ9Y535 204 aaPredicted RBP16.96■□□□□ 0.31
CHRD-216ENST00000486066 SLC25A15Q9Y619 301 aa16.96■□□□□ 0.31
CHRD-216ENST00000486066 GPC6Q9Y625 555 aaPredicted RBP16.96■□□□□ 0.31
CHRD-216ENST00000486066 IGHV3-15A0A0B4J1V0 119 aa16.95■□□□□ 0.3
CHRD-216ENST00000486066 ESYT3A0FGR9 886 aa16.95■□□□□ 0.3
CHRD-216ENST00000486066 TRIM49D1C9J1S8 452 aa16.95■□□□□ 0.3
CHRD-216ENST00000486066 TBX19O60806 448 aa16.95■□□□□ 0.3
CHRD-216ENST00000486066 INHBAP08476 426 aa16.95■□□□□ 0.3
CHRD-216ENST00000486066 CSF3P09919 207 aa16.95■□□□□ 0.3
CHRD-216ENST00000486066 PRKCAP17252 672 aa16.95■□□□□ 0.3
CHRD-216ENST00000486066 CD40P25942 277 aa16.95■□□□□ 0.3
CHRD-216ENST00000486066 EFNA4P52798 201 aa16.95■□□□□ 0.3
CHRD-216ENST00000486066 PRKAA2P54646 552 aa16.95■□□□□ 0.3
CHRD-216ENST00000486066 HSPB3Q12988 150 aa16.95■□□□□ 0.3
CHRD-216ENST00000486066 ZNF385BQ569K4 471 aa16.95■□□□□ 0.3
CHRD-216ENST00000486066 ZNF544Q6NX49 715 aa16.95■□□□□ 0.3
CHRD-216ENST00000486066 NOXRED1Q6NXP6 359 aa16.95■□□□□ 0.3
CHRD-216ENST00000486066 MTERF4Q7Z6M4 381 aaKnown RBP16.95■□□□□ 0.3
CHRD-216ENST00000486066 MMGT1Q8N4V1 131 aa16.95■□□□□ 0.3
CHRD-216ENST00000486066 CEP70Q8NHQ1 597 aa16.95■□□□□ 0.3
CHRD-216ENST00000486066 CDC26Q8NHZ8 85 aa16.95■□□□□ 0.3
CHRD-216ENST00000486066 GPR119Q8TDV5 335 aa16.95■□□□□ 0.3
CHRD-216ENST00000486066 MSI2Q96DH6 328 aaKnown RBP16.95■□□□□ 0.3
CHRD-216ENST00000486066 MS4A4EQ96PG1 132 aa16.95■□□□□ 0.3
CHRD-216ENST00000486066 ZNF300Q96RE9 604 aaPredicted RBP16.95■□□□□ 0.3
CHRD-216ENST00000486066 GSTO2Q9H4Y5 243 aa16.95■□□□□ 0.3
CHRD-216ENST00000486066 STK38LQ9Y2H1 464 aa16.95■□□□□ 0.3
CHRD-216ENST00000486066 DYSFO75923 2080 aa16.95■□□□□ 0.3
CHRD-216ENST00000486066 TRRAPQ9Y4A5 3859 aa16.95■□□□□ 0.3
CHRD-216ENST00000486066 GJE1A6NN92 205 aa16.94■□□□□ 0.3
CHRD-216ENST00000486066 SCDO00767 359 aa16.94■□□□□ 0.3
CHRD-216ENST00000486066 PTAFRP25105 342 aa16.94■□□□□ 0.3
CHRD-216ENST00000486066 SUMO3P55854 103 aaPredicted RBP16.94■□□□□ 0.3
CHRD-216ENST00000486066 KLHL26Q53HC5 615 aa16.94■□□□□ 0.3
CHRD-216ENST00000486066 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.94■□□□□ 0.32e-8■■□□□ 13.3
CHRD-216ENST00000486066 CCNJQ5T5M9 372 aa16.94■□□□□ 0.3
CHRD-216ENST00000486066 FAM166AQ6J272 317 aa16.94■□□□□ 0.3
CHRD-216ENST00000486066 TMEM108Q6UXF1 575 aa16.94■□□□□ 0.3
CHRD-216ENST00000486066 NUP43Q8NFH3 380 aa16.94■□□□□ 0.3
CHRD-216ENST00000486066 FBXO30Q8TB52 745 aa16.94■□□□□ 0.3
CHRD-216ENST00000486066 CIDECQ96AQ7 238 aaPredicted RBP16.94■□□□□ 0.3
CHRD-216ENST00000486066 C16orf58Q96GQ5 468 aa16.94■□□□□ 0.3
CHRD-216ENST00000486066 MRGPRX4Q96LA9 322 aa16.94■□□□□ 0.3
CHRD-216ENST00000486066 KCNS2Q9ULS6 477 aa16.94■□□□□ 0.3
CHRD-216ENST00000486066 IGKV3D-15A0A087WSY6 115 aa16.93■□□□□ 0.3
CHRD-216ENST00000486066 ESPNB1AK53 854 aa16.93■□□□□ 0.3
CHRD-216ENST00000486066 NPIPB9F8W1W9 429 aa16.93■□□□□ 0.3
CHRD-216ENST00000486066 RSL1D1O76021 490 aaKnown RBP16.93■□□□□ 0.3
CHRD-216ENST00000486066 LY6HO94772 140 aa16.93■□□□□ 0.3
CHRD-216ENST00000486066 HSPA4LO95757 839 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms