RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 OSTF1Q92882 214 aa15.86■□□□□ 0.13
COL6A1-204ENST00000486023 MCTS1Q9ULC4 181 aaKnown RBP15.86■□□□□ 0.13
COL6A1-204ENST00000486023 ZNF175Q9Y473 711 aa15.86■□□□□ 0.13
COL6A1-204ENST00000486023 A0A0J9YW62 118 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 CENPVL1A0A0U1RR11 272 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 A6NNC1 897 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 ZNF195O14628 629 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 CASKO14936 926 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 ZNF264O43296 627 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 SLC22A3O75751 556 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 AK1P00568 194 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 PGRP06401 933 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 LINGO3P0C6S8 592 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 UBTFL6P0CB48 400 aaPredicted RBP15.85■□□□□ 0.13
COL6A1-204ENST00000486023 UBL4AP11441 157 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 EPXP11678 715 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 CDKN2CP42773 168 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 KIR2DL2P43627 348 aaPredicted RBP15.85■□□□□ 0.13
COL6A1-204ENST00000486023 KHKP50053 298 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 POU4F3Q15319 338 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 PDSS1Q5T2R2 415 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 SAXO2Q658L1 398 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 DNAJC14Q6Y2X3 702 aaPredicted RBP15.85■□□□□ 0.13
COL6A1-204ENST00000486023 MAVSQ7Z434 540 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 RNF130Q86XS8 419 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 TRIML2Q8N7C3 387 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 GOLGA6L1Q8N7Z2 621 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 ZNF610Q8N9Z0 462 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 CHDHQ8NE62 594 aaPredicted RBP15.85■□□□□ 0.13
COL6A1-204ENST00000486023 TOR1AIP2Q8NFQ8 470 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 OR2V1Q8NHB1 315 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 PIWIL2Q8TC59 973 aaKnown RBP15.85■□□□□ 0.13
COL6A1-204ENST00000486023 GPR119Q8TDV5 335 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 DYDC1Q8WWB3 177 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 ROBO4Q8WZ75 1007 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 ROPN1LQ96C74 230 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 CCDC115Q96NT0 180 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 OR52B2Q96RD2 323 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 THUMPD3Q9BV44 507 aaKnown RBP15.85■□□□□ 0.13
COL6A1-204ENST00000486023 LIME1Q9H400 295 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 RNF122Q9H9V4 155 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 RASSF1Q9NS23 344 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 BTNL2Q9UIR0 455 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 KCNE5Q9UJ90 142 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 ICAM5Q9UMF0 924 aa15.85■□□□□ 0.13
COL6A1-204ENST00000486023 CCDC168Q8NDH2 2452 aa15.84■□□□□ 0.13
COL6A1-204ENST00000486023 NPIPB9F8W1W9 429 aa15.84■□□□□ 0.13
COL6A1-204ENST00000486023 UGT2B17O75795 530 aa15.84■□□□□ 0.13
COL6A1-204ENST00000486023 AGR2O95994 175 aa15.84■□□□□ 0.13
COL6A1-204ENST00000486023 CSTAP01040 98 aa15.84■□□□□ 0.13
COL6A1-204ENST00000486023 CRHP06850 196 aa15.84■□□□□ 0.13
COL6A1-204ENST00000486023 PSMA4P25789 261 aaKnown RBP15.84■□□□□ 0.13
COL6A1-204ENST00000486023 SHC1P29353 583 aa15.84■□□□□ 0.13
COL6A1-204ENST00000486023 EIF1P41567 113 aaKnown RBP15.84■□□□□ 0.13
COL6A1-204ENST00000486023 CTBP2P56545 445 aa15.84■□□□□ 0.13
COL6A1-204ENST00000486023 CARD18P57730 90 aa15.84■□□□□ 0.13
COL6A1-204ENST00000486023 HPCAP84074 193 aa15.84■□□□□ 0.13
COL6A1-204ENST00000486023 CBFBQ13951 182 aa15.84■□□□□ 0.13
COL6A1-204ENST00000486023 QPRTQ15274 297 aa15.84■□□□□ 0.13
COL6A1-204ENST00000486023 TMEM176BQ3YBM2 270 aaPredicted RBP15.84■□□□□ 0.13
COL6A1-204ENST00000486023 ESPNLQ6ZVH7 1005 aa15.84■□□□□ 0.13
COL6A1-204ENST00000486023 OR5W2Q8NH69 310 aa15.84■□□□□ 0.13
COL6A1-204ENST00000486023 LRRC8CQ8TDW0 803 aa15.84■□□□□ 0.13
COL6A1-204ENST00000486023 NEURL3Q96EH8 262 aa15.84■□□□□ 0.13
COL6A1-204ENST00000486023 ATP6V1G3Q96LB4 118 aa15.84■□□□□ 0.13
COL6A1-204ENST00000486023 KLHL15Q96M94 604 aa15.84■□□□□ 0.13
COL6A1-204ENST00000486023 PROCRQ9UNN8 238 aa15.84■□□□□ 0.13
COL6A1-204ENST00000486023 WDR45Q9Y484 360 aa15.84■□□□□ 0.13
COL6A1-204ENST00000486023 PCNX3Q9H6A9 2034 aa15.84■□□□□ 0.13
COL6A1-204ENST00000486023 NUP214P35658 2090 aaPredicted RBP15.83■□□□□ 0.13
COL6A1-204ENST00000486023 C7orf72A4D263 438 aa15.83■□□□□ 0.12
COL6A1-204ENST00000486023 RFXANKO14593 260 aa15.83■□□□□ 0.12
COL6A1-204ENST00000486023 MSTNO14793 375 aa15.83■□□□□ 0.12
COL6A1-204ENST00000486023 UBDO15205 165 aa15.83■□□□□ 0.12
COL6A1-204ENST00000486023 ANP32DO95626 131 aa15.83■□□□□ 0.12
COL6A1-204ENST00000486023 FCGR2AP12318 317 aa15.83■□□□□ 0.12
COL6A1-204ENST00000486023 POU2F1P14859 743 aa15.83■□□□□ 0.12
COL6A1-204ENST00000486023 IDO1P14902 403 aa15.83■□□□□ 0.12
COL6A1-204ENST00000486023 RYKP34925 604 aa15.83■□□□□ 0.12
COL6A1-204ENST00000486023 SORDQ00796 357 aa15.83■□□□□ 0.12
COL6A1-204ENST00000486023 MAPK14Q16539 360 aa15.83■□□□□ 0.12
COL6A1-204ENST00000486023 TTMPQ5BVD1 217 aa15.83■□□□□ 0.12
COL6A1-204ENST00000486023 ANKRD34AQ69YU3 496 aa15.83■□□□□ 0.12
COL6A1-204ENST00000486023 TYW3Q6IPR3 259 aaKnown RBP15.83■□□□□ 0.12
COL6A1-204ENST00000486023 EIF3MQ7L2H7 374 aaKnown RBP15.83■□□□□ 0.12
COL6A1-204ENST00000486023 FAM214BQ7L5A3 538 aa15.83■□□□□ 0.12
COL6A1-204ENST00000486023 CDC20BQ86Y33 519 aa15.83■□□□□ 0.12
COL6A1-204ENST00000486023 ZG16BQ96DA0 208 aa15.83■□□□□ 0.12
COL6A1-204ENST00000486023 REXO5Q96IC2 774 aaKnown RBP15.83■□□□□ 0.12
COL6A1-204ENST00000486023 ADGRG7Q96K78 797 aa15.83■□□□□ 0.12
COL6A1-204ENST00000486023 KLHL4Q9C0H6 718 aa15.83■□□□□ 0.12
COL6A1-204ENST00000486023 NMUR2Q9GZQ4 415 aa15.83■□□□□ 0.12
COL6A1-204ENST00000486023 QRSL1Q9H0R6 528 aaKnown RBP15.83■□□□□ 0.12
COL6A1-204ENST00000486023 NDRG3Q9UGV2 375 aa15.83■□□□□ 0.12
COL6A1-204ENST00000486023 EMC9Q9Y3B6 208 aa15.83■□□□□ 0.12
COL6A1-204ENST00000486023 USH1CQ9Y6N9 552 aa15.83■□□□□ 0.12
COL6A1-204ENST00000486023 DOCK7Q96N67 2140 aa15.82■□□□□ 0.12
COL6A1-204ENST00000486023 SH3D21A4FU49 640 aa15.82■□□□□ 0.12
COL6A1-204ENST00000486023 ADAMDEC1O15204 470 aa15.82■□□□□ 0.12
COL6A1-204ENST00000486023 EFNA2O43921 213 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms