RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 LY6DQ14210 128 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 DPYSL2Q16555 572 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 TP53I3Q53FA7 332 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 MEDAGQ5VYS4 303 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 CARD17Q5XLA6 110 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 ARMCX5Q6P1M9 558 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 RFWD3Q6PCD5 774 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 PAQR6Q6TCH4 344 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 H2BFWTQ7Z2G1 175 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 DHDDSQ86SQ9 333 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 PHC2Q8IXK0 858 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 SLC35F2Q8IXU6 374 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 KLHDC8BQ8IXV7 354 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 GPR137CQ8N3F9 429 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 AGR3Q8TD06 166 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 TMEM80Q96HE8 168 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 ART5Q96L15 291 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 C9orf85Q96MD7 179 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 DUX3Q96PT4 197 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 MTG1Q9BT17 334 aaPredicted RBP3.65□□□□□ -1.83
VPS13A-211ENST00000484581 FGFBP2Q9BYJ0 223 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 SLC2A8Q9NY64 477 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 WRAP73Q9P2S5 460 aaPredicted RBP3.65□□□□□ -1.83
VPS13A-211ENST00000484581 CA5BQ9Y2D0 317 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 PPIAL4AQ9Y536 164 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 IGHV3-16A0A0C4DH30 117 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 IGHV2-70DA0A0C4DH43 119 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 SAGE2PA6NJ88 616 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 TCP11X1B4DZS4 312 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 H3BMQ9 156 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 POLR2DO15514 142 aaKnown RBP3.64□□□□□ -1.83
VPS13A-211ENST00000484581 EDIL3O43854 480 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 RAMP3O60896 148 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 SEMA4FO95754 770 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 HPP00738 406 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 KRT14P02533 472 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 CRYGBP07316 175 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 H2AFZP0C0S5 128 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 PABPC4LP0CB38 370 aaKnown RBP3.64□□□□□ -1.83
VPS13A-211ENST00000484581 TRIM49P0CI25 452 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 TRIM49CP0CI26 452 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 TROVE2P10155 538 aaKnown RBP eCLIP3.64□□□□□ -1.83
VPS13A-211ENST00000484581 ANXA8P13928 327 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 CDH5P33151 784 aaPredicted RBP3.64□□□□□ -1.83
VPS13A-211ENST00000484581 GSK3BP49841 420 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 TPMTP51580 245 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 OC90Q02509 493 aaPredicted RBP3.64□□□□□ -1.83
VPS13A-211ENST00000484581 ACY1Q03154 408 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 TGM3Q08188 693 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 KLRB1Q12918 225 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 ZNF154Q13106 437 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 IL18R1Q13478 541 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 TEX44Q53QW1 395 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 FAM120AOSQ5T036 256 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 C1orf185Q5T7R7 199 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 ANXA8L1Q5VT79 327 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 LRRC49Q8IUZ0 686 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 ALLCQ8N6M5 410 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 Q8NBF4 154 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 C17orf47Q8NEP4 570 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 SPATA4Q8NEY3 305 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 OR9A4Q8NGU2 314 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 HCAR2Q8TDS4 363 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 NPRL2Q8WTW4 380 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 GTF3AQ92664 365 aaKnown RBP3.64□□□□□ -1.83
VPS13A-211ENST00000484581 SLC45A3Q96JT2 553 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 CCDC28BQ9BUN5 200 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 SPATA16Q9BXB7 569 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 PPDPFQ9H3Y8 114 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 GLIPR2Q9H4G4 154 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 CRLF2Q9HC73 371 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 POLE4Q9NR33 117 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 PISDQ9UG56 409 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 RNF24Q9Y225 148 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 MRPL11Q9Y3B7 192 aaKnown RBP3.64□□□□□ -1.83
VPS13A-211ENST00000484581 GON4LQ3T8J9 2241 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 WDR19Q8NEZ3 1342 aa3.64□□□□□ -1.83
VPS13A-211ENST00000484581 RPAP1Q9BWH6 1393 aaPredicted RBP3.63□□□□□ -1.83
VPS13A-211ENST00000484581 SERTM2A0A1B0GWG4 89 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 A0A1W2PPE3 182 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 PP2D1A8MPX8 630 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.63□□□□□ -1.83
VPS13A-211ENST00000484581 H0YC42 278 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 GOLGA8SH3BPF8 625 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 L7N2F9 121 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 SOCS3O14543 225 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 CASC3O15234 703 aaKnown RBP3.63□□□□□ -1.83
VPS13A-211ENST00000484581 RS1O15537 224 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 UGT2B17O75795 530 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 DIRAS1O95057 198 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 CD55P08174 381 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 OXTRP30559 389 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 OR1D4P47884 311 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 CRYBB1P53674 252 aaPredicted RBP3.63□□□□□ -1.83
VPS13A-211ENST00000484581 OGDHQ02218 1023 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 ARHGAP19Q14CB8 494 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 CNPY1Q3B7I2 92 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 C1orf220Q5T0J3 134 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 LIPNQ5VXI9 398 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 LRRC66Q68CR7 880 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms