RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 GPR32P1Q8NGA4 272 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 OR52P1PQ8NH57 321 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 PSMF1Q92530 271 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 PMM1Q92871 262 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 RIT1Q92963 219 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 GIMAP5Q96F15 307 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 OTUB1Q96FW1 271 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-216ENST00000484087 SLC35A4Q96G79 324 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 FEVQ99581 238 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 SMAD5Q99717 465 aaKnown RBP6.39□□□□□ -1.39
BRCA1-216ENST00000484087 PSD2Q9BQI7 771 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 EVA1AQ9H8M9 152 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 NECTIN3Q9NQS3 549 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 POLE3Q9NRF9 147 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 DUSP22Q9NRW4 184 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 ACER3Q9NUN7 267 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 C14orf105Q9NVL8 296 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 SCN3BQ9NY72 215 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 NXT1Q9UKK6 140 aaKnown RBP6.39□□□□□ -1.39
BRCA1-216ENST00000484087 MGAT4BQ9UQ53 548 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 TPRKBQ9Y3C4 175 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 SNX5Q9Y5X3 404 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 A0A1W2PS29 197 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 PRAMEF27A3QJZ7 478 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 SYNDIG1LA6NDD5 238 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 J3KTA2 159 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 OR10H3O60404 316 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 MITFO75030 526 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-216ENST00000484087 LGI1O95970 557 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 HPP00738 406 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 ADAP00813 363 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 TFAP2AP05549 437 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 DBIP07108 87 aaKnown RBP6.38□□□□□ -1.39
BRCA1-216ENST00000484087 THBS1P07996 1170 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 CCDC159P0C7I6 412 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 RNF224P0DH78 156 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 SFTPCP11686 197 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 CYP4B1P13584 511 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 TNNI3P19429 210 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 GNLYP22749 145 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 TTKP33981 857 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 PIGAP37287 484 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 UGT2B15P54855 530 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 TAS2R41P59536 307 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 GABARAPL2P60520 117 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 CXCR4P61073 352 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 CSNK2BP67870 215 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 POU6F2P78424 691 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-216ENST00000484087 PMP22Q01453 160 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 CHRNEQ04844 493 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 FUT5Q11128 374 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 MAP4K2Q12851 820 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 ZNF155Q12901 538 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-216ENST00000484087 AIMP2Q13155 320 aaKnown RBP6.38□□□□□ -1.39
BRCA1-216ENST00000484087 MAPK11Q15759 364 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 BTBD16Q32M84 506 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 TRMT12Q53H54 448 aaKnown RBP6.38□□□□□ -1.39
BRCA1-216ENST00000484087 C6orf141Q5SZD1 244 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 PAPD4Q6PIY7 484 aaKnown RBP6.38□□□□□ -1.39
BRCA1-216ENST00000484087 DHRS4L2Q6PKH6 230 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 TMEM205Q6UW68 189 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 C16orf47Q6ZP98 133 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-216ENST00000484087 RRM2BQ7LG56 351 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 CPEB2Q7Z5Q1 589 aaKnown RBP6.38□□□□□ -1.39
BRCA1-216ENST00000484087 GPR141Q7Z602 305 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 SATL1Q86VE3 508 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 P3H2Q8IVL5 708 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 CISD2Q8N5K1 135 aaKnown RBP6.38□□□□□ -1.39
BRCA1-216ENST00000484087 SLC5A8Q8N695 610 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 SLC16A11Q8NCK7 471 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 CHDHQ8NE62 594 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-216ENST00000484087 OR4C15Q8NGM1 316 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 GPR151Q8TDV0 419 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 CDS1Q92903 461 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 SLC38A4Q969I6 547 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 ANKRD9Q96BM1 317 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-216ENST00000484087 DGCR14Q96DF8 476 aaKnown RBP6.38□□□□□ -1.39
BRCA1-216ENST00000484087 PRRC1Q96M27 445 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 OR1F2PQ96R84 312 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 BARD1Q99728 777 aaKnown RBP6.38□□□□□ -1.39
BRCA1-216ENST00000484087 GABARAPL3Q9BY60 117 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 HES7Q9BYE0 225 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 ALOXE3Q9BYJ1 711 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 TGIF2Q9GZN2 237 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 SLC38A1Q9H2H9 487 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 CXorf56Q9H5V9 222 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 ANKRA2Q9H9E1 313 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 NMNAT1Q9HAN9 279 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-216ENST00000484087 KRCC1Q9NPI7 259 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-216ENST00000484087 MAT2BQ9NZL9 334 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 MMACHCQ9Y4U1 282 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 CLDN16Q9Y5I7 305 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 EML6Q6ZMW3 1958 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 HECTD1Q9ULT8 2610 aa6.38□□□□□ -1.39
BRCA1-216ENST00000484087 SVILO95425 2214 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 ASH1LQ9NR48 2969 aaKnown RBP6.37□□□□□ -1.39
BRCA1-216ENST00000484087 DSPPQ9NZW4 1301 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 LOC102723996A0A087X1L8 192 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 A0A1W2PRQ8 180 aa6.37□□□□□ -1.39
BRCA1-216ENST00000484087 M0R3H8 397 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms